RNA–Protein interactions for RNA: ENST00000497382.5

VIT-208, Transcript of vitrin, human

TSL 1 (best) BASIC

Gene VIT, Length 2,650 nt, Biotype protein coding, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
VIT-208	ENST00000497382	TMEM62	Q0P6H9	643 aa		10.82	□□□□□ -0.68
VIT-208	ENST00000497382	NAA16	Q6N069	864 aa	Predicted RBP	10.82	□□□□□ -0.68
VIT-208	ENST00000497382	FAM196A	Q6ZSG2	479 aa		10.82	□□□□□ -0.68
VIT-208	ENST00000497382	CTNNBL1	Q8WYA6	563 aa	Predicted RBP	10.82	□□□□□ -0.68
VIT-208	ENST00000497382	CUL5	Q93034	780 aa		10.82	□□□□□ -0.68
VIT-208	ENST00000497382	PAWR	Q96IZ0	340 aa	Known RBP	10.82	□□□□□ -0.68
VIT-208	ENST00000497382	PARD6B	Q9BYG5	372 aa		10.82	□□□□□ -0.68
VIT-208	ENST00000497382	NRDE2	Q9H7Z3	1164 aa		10.82	□□□□□ -0.68
VIT-208	ENST00000497382	EPB41L4A	Q9HCS5	686 aa	Predicted RBP	10.82	□□□□□ -0.68
VIT-208	ENST00000497382	LUC7L	Q9NQ29	371 aa	Known RBP	10.82	□□□□□ -0.68
VIT-208	ENST00000497382	SPATA31A5	Q5VU36	1347 aa		10.81	□□□□□ -0.68
VIT-208	ENST00000497382	SPATA31A7	Q8IWB4	1347 aa		10.81	□□□□□ -0.68
VIT-208	ENST00000497382	IFRD1	O00458	451 aa	Predicted RBP	10.81	□□□□□ -0.68
VIT-208	ENST00000497382	CHUK	O15111	745 aa		10.81	□□□□□ -0.68
VIT-208	ENST00000497382	BTF3	P20290	206 aa	Known RBP	10.81	□□□□□ -0.68
VIT-208	ENST00000497382	SCNN1B	P51168	640 aa		10.81	□□□□□ -0.68
VIT-208	ENST00000497382	CLNS1A	P54105	237 aa	Known RBP	10.81	□□□□□ -0.68
VIT-208	ENST00000497382	PAK2	Q13177	524 aa		10.81	□□□□□ -0.68
VIT-208	ENST00000497382	CWF19L1	Q69YN2	538 aa	Known RBP	10.81	□□□□□ -0.68
VIT-208	ENST00000497382	DNAI2	Q9GZS0	605 aa		10.81	□□□□□ -0.68
VIT-208	ENST00000497382	BATF3	Q9NR55	127 aa		10.81	□□□□□ -0.68
VIT-208	ENST00000497382	KCTD5	Q9NXV2	234 aa		10.81	□□□□□ -0.68
VIT-208	ENST00000497382	SEPT10	Q9P0V9	454 aa		10.81	□□□□□ -0.68
VIT-208	ENST00000497382		A0A0G2JS52	829 aa		10.81	□□□□□ -0.68
VIT-208	ENST00000497382	STXBP3	O00186	592 aa		10.81	□□□□□ -0.68
VIT-208	ENST00000497382	MBD4	O95243	580 aa		10.81	□□□□□ -0.68
VIT-208	ENST00000497382	CUL4B	Q13620	913 aa		10.81	□□□□□ -0.68
VIT-208	ENST00000497382	EZH2	Q15910	746 aa	Known RBP	10.81	□□□□□ -0.68
VIT-208	ENST00000497382	CCDC122	Q5T0U0	273 aa		10.81	□□□□□ -0.68
VIT-208	ENST00000497382	C11orf74	Q86VG3	221 aa		10.81	□□□□□ -0.68
VIT-208	ENST00000497382	GIMAP8	Q8ND71	665 aa	Predicted RBP	10.81	□□□□□ -0.68
VIT-208	ENST00000497382	OR8K1	Q8NGG5	319 aa		10.81	□□□□□ -0.68
VIT-208	ENST00000497382	SPAG5	Q96R06	1193 aa		10.81	□□□□□ -0.68
VIT-208	ENST00000497382	FBXL5	Q9UKA1	691 aa		10.81	□□□□□ -0.68
VIT-208	ENST00000497382	TRBV21OR9-2	A0A075B6F4	123 aa	Predicted RBP	10.81	□□□□□ -0.68
VIT-208	ENST00000497382	GTPBP10	A4D1E9	387 aa	Known RBP	10.81	□□□□□ -0.68
VIT-208	ENST00000497382	RASA4B	C9J798	803 aa		10.81	□□□□□ -0.68
VIT-208	ENST00000497382	ERLIN2	O94905	339 aa		10.81	□□□□□ -0.68
VIT-208	ENST00000497382	TCF7	P36402	384 aa	Predicted RBP	10.81	□□□□□ -0.68
VIT-208	ENST00000497382	GCLC	P48506	637 aa	Predicted RBP	10.81	□□□□□ -0.68
VIT-208	ENST00000497382	KLHL40	Q2TBA0	621 aa		10.81	□□□□□ -0.68
VIT-208	ENST00000497382	WLS	Q5T9L3	541 aa		10.81	□□□□□ -0.68
VIT-208	ENST00000497382	NANOGNB	Q7Z5D8	188 aa		10.81	□□□□□ -0.68
VIT-208	ENST00000497382	WDR75	Q8IWA0	830 aa	Known RBP	10.81	□□□□□ -0.68
VIT-208	ENST00000497382	TMCO5A	Q8N6Q1	288 aa		10.81	□□□□□ -0.68
VIT-208	ENST00000497382	ZNF75CP	Q92670	426 aa	Predicted RBP	10.81	□□□□□ -0.68
VIT-208	ENST00000497382	OSBPL9	Q96SU4	736 aa		10.81	□□□□□ -0.68
VIT-208	ENST00000497382	BUD13	Q9BRD0	619 aa	Known RBP eCLIP	10.81	□□□□□ -0.68
VIT-208	ENST00000497382	RABGAP1	Q9Y3P9	1069 aa		10.81	□□□□□ -0.68
VIT-208	ENST00000497382	hCG_1984214	I3L0E3	225 aa		10.8	□□□□□ -0.68
VIT-208	ENST00000497382	FAM98C	Q17RN3	349 aa	Known RBP	10.8	□□□□□ -0.68
VIT-208	ENST00000497382		Q3C1V9	767 aa		10.8	□□□□□ -0.68
VIT-208	ENST00000497382	SLC30A9	Q6PML9	568 aa		10.8	□□□□□ -0.68
VIT-208	ENST00000497382	CWC27	Q6UX04	472 aa	Known RBP	10.8	□□□□□ -0.68
VIT-208	ENST00000497382	GIGYF2	Q6Y7W6	1299 aa	Known RBP	10.8	□□□□□ -0.68
VIT-208	ENST00000497382	C14orf80	Q86SX3	495 aa		10.8	□□□□□ -0.68
VIT-208	ENST00000497382	RSPH3	Q86UC2	560 aa		10.8	□□□□□ -0.68
VIT-208	ENST00000497382	IQCA1	Q86XH1	822 aa		10.8	□□□□□ -0.68
VIT-208	ENST00000497382	GBP7	Q8N8V2	638 aa	Predicted RBP	10.8	□□□□□ -0.68
VIT-208	ENST00000497382	BICD2	Q8TD16	824 aa		10.8	□□□□□ -0.68
VIT-208	ENST00000497382	ANKAR	Q7Z5J8	1434 aa		10.8	□□□□□ -0.68
VIT-208	ENST00000497382	USP19	O94966	1318 aa		10.8	□□□□□ -0.68
VIT-208	ENST00000497382	GOLGA6L10	A0A0M3HER8	536 aa		10.8	□□□□□ -0.68
VIT-208	ENST00000497382	KCNQ2	O43526	872 aa		10.8	□□□□□ -0.68
VIT-208	ENST00000497382	ZBTB17	Q13105	803 aa		10.8	□□□□□ -0.68
VIT-208	ENST00000497382	BTG3	Q14201	252 aa	Predicted RBP	10.8	□□□□□ -0.68
VIT-208	ENST00000497382	SH2D4B	Q5SQS7	431 aa		10.8	□□□□□ -0.68
VIT-208	ENST00000497382	LRRC45	Q96CN5	670 aa		10.8	□□□□□ -0.68
VIT-208	ENST00000497382	TUBGCP4	Q9UGJ1	667 aa		10.8	□□□□□ -0.68
VIT-208	ENST00000497382	TRPM3	Q9HCF6	1732 aa	Predicted RBP	10.79	□□□□□ -0.68
VIT-208	ENST00000497382	FAM83G	A6ND36	823 aa		10.79	□□□□□ -0.68
VIT-208	ENST00000497382	GOLGA8A	A7E2F4	631 aa		10.79	□□□□□ -0.68
VIT-208	ENST00000497382	CAVIN2	O95810	425 aa		10.79	□□□□□ -0.68
VIT-208	ENST00000497382	CCT8	P50990	548 aa		10.79	□□□□□ -0.68
VIT-208	ENST00000497382	RCAN1	P53805	252 aa		10.79	□□□□□ -0.68
VIT-208	ENST00000497382	ST5	P78524	1137 aa		10.79	□□□□□ -0.68
VIT-208	ENST00000497382	PDXDC2P	Q6P474	469 aa		10.79	□□□□□ -0.68
VIT-208	ENST00000497382	NPAS4	Q8IUM7	802 aa		10.79	□□□□□ -0.68
VIT-208	ENST00000497382	DGCR8	Q8WYQ5	773 aa	Known RBP eCLIP	10.79	□□□□□ -0.68
VIT-208	ENST00000497382	RABGGTA	Q92696	567 aa		10.79	□□□□□ -0.68
VIT-208	ENST00000497382	SPDL1	Q96EA4	605 aa		10.79	□□□□□ -0.68
VIT-208	ENST00000497382	ALS2CR12	Q96Q35	445 aa		10.79	□□□□□ -0.68
VIT-208	ENST00000497382	MRGBP	Q9NV56	204 aa		10.79	□□□□□ -0.68
VIT-208	ENST00000497382	ARGLU1	Q9NWB6	273 aa	Predicted RBP	10.79	□□□□□ -0.68
VIT-208	ENST00000497382	MKL2	Q9ULH7	1088 aa		10.79	□□□□□ -0.68
VIT-208	ENST00000497382	TRPC6	Q9Y210	931 aa		10.79	□□□□□ -0.68
VIT-208	ENST00000497382	SQOR	Q9Y6N5	450 aa		10.79	□□□□□ -0.68
VIT-208	ENST00000497382	CHD4	Q14839	1912 aa		10.79	□□□□□ -0.68
VIT-208	ENST00000497382	ALS2	Q96Q42	1657 aa		10.79	□□□□□ -0.68
VIT-208	ENST00000497382	SART1	O43290	800 aa	Known RBP	10.79	□□□□□ -0.68
VIT-208	ENST00000497382	ALOX15	P16050	662 aa	Predicted RBP	10.79	□□□□□ -0.68
VIT-208	ENST00000497382	HAL	P42357	657 aa		10.79	□□□□□ -0.68
VIT-208	ENST00000497382	ROR2	Q01974	943 aa	Known RBP	10.79	□□□□□ -0.68
VIT-208	ENST00000497382	MRPL28	Q13084	256 aa	Known RBP	10.79	□□□□□ -0.68
VIT-208	ENST00000497382	TAF1C	Q15572	869 aa	Predicted RBP	10.79	□□□□□ -0.68
VIT-208	ENST00000497382	VPS53	Q5VIR6	699 aa		10.79	□□□□□ -0.68
VIT-208	ENST00000497382	UTP14A	Q9BVJ6	771 aa	Known RBP	10.79	□□□□□ -0.68
VIT-208	ENST00000497382	TSPY26P	Q9H489	355 aa		10.79	□□□□□ -0.68
VIT-208	ENST00000497382	PDRG1	Q9NUG6	133 aa		10.79	□□□□□ -0.68
VIT-208	ENST00000497382	PPP1R9A	Q9ULJ8	1098 aa		10.79	□□□□□ -0.68

Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms