RNA–Protein interactions for RNA: ENST00000496332.5

THBS3-208, Transcript of thrombospondin 3, humanhuman

TSL 3

Gene THBS3, Length 839 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-208ENST00000496332 UNC93B1Q9H1C4 597 aa14.15□□□□□ -0.14
THBS3-208ENST00000496332 PORCNQ9H237 461 aa14.15□□□□□ -0.14
THBS3-208ENST00000496332 KANSL2Q9H9L4 492 aa14.15□□□□□ -0.14
THBS3-208ENST00000496332 ROBO3Q96MS0 1386 aa14.14□□□□□ -0.15
THBS3-208ENST00000496332 SPDYE16A6NNV3 312 aaPredicted RBP14.14□□□□□ -0.15
THBS3-208ENST00000496332 GJB1P08034 283 aa14.14□□□□□ -0.15
THBS3-208ENST00000496332 RASA1P20936 1047 aa14.14□□□□□ -0.15
THBS3-208ENST00000496332 COG2Q14746 738 aa14.14□□□□□ -0.15
THBS3-208ENST00000496332 LBX2Q6XYB7 198 aa14.14□□□□□ -0.15
THBS3-208ENST00000496332 SPICE1Q8N0Z3 855 aa14.14□□□□□ -0.15
THBS3-208ENST00000496332 LPAR1Q92633 364 aa14.14□□□□□ -0.15
THBS3-208ENST00000496332 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.14□□□□□ -0.15
THBS3-208ENST00000496332 VCPKMTQ9H867 229 aa14.14□□□□□ -0.15
THBS3-208ENST00000496332 HOXC10Q9NYD6 342 aa14.14□□□□□ -0.15
THBS3-208ENST00000496332 BTBD7Q9P203 1132 aa14.14□□□□□ -0.15
THBS3-208ENST00000496332 KIAA0100Q14667 2235 aaKnown RBP14.14□□□□□ -0.15
THBS3-208ENST00000496332 CYP2B6P20813 491 aa14.13□□□□□ -0.15
THBS3-208ENST00000496332 GJA8P48165 433 aa14.13□□□□□ -0.15
THBS3-208ENST00000496332 CCNA1P78396 465 aa14.13□□□□□ -0.15
THBS3-208ENST00000496332 NUCB1Q02818 461 aa14.13□□□□□ -0.15
THBS3-208ENST00000496332 CCDC129Q6ZRS4 1044 aa14.13□□□□□ -0.15
THBS3-208ENST00000496332 GPR142Q7Z601 462 aa14.13□□□□□ -0.15
THBS3-208ENST00000496332 PLEKHH3Q7Z736 793 aa14.13□□□□□ -0.15
THBS3-208ENST00000496332 CHD1LQ86WJ1 897 aa14.13□□□□□ -0.15
THBS3-208ENST00000496332 NKX2-3Q8TAU0 364 aa14.13□□□□□ -0.15
THBS3-208ENST00000496332 SHISA4Q96DD7 197 aa14.13□□□□□ -0.15
THBS3-208ENST00000496332 NUDT12Q9BQG2 462 aa14.13□□□□□ -0.15
THBS3-208ENST00000496332 NAPBQ9H115 298 aa14.13□□□□□ -0.15
THBS3-208ENST00000496332 CWC22Q9HCG8 908 aaKnown RBP14.13□□□□□ -0.15
THBS3-208ENST00000496332 PRDM1O75626 825 aa14.12□□□□□ -0.15
THBS3-208ENST00000496332 ZNF444Q8N0Y2 327 aaPredicted RBP14.12□□□□□ -0.15
THBS3-208ENST00000496332 SOCS4Q8WXH5 440 aa14.12□□□□□ -0.15
THBS3-208ENST00000496332 ZNF287Q9HBT7 754 aa14.12□□□□□ -0.15
THBS3-208ENST00000496332 TRIM6-TRIM34B2RNG4 842 aa14.11□□□□□ -0.15
THBS3-208ENST00000496332 WDR46O15213 610 aaKnown RBP14.11□□□□□ -0.15
THBS3-208ENST00000496332 RAD21O60216 631 aa14.11□□□□□ -0.15
THBS3-208ENST00000496332 FLOT1O75955 427 aa14.11□□□□□ -0.15
THBS3-208ENST00000496332 SGPL1O95470 568 aa14.11□□□□□ -0.15
THBS3-208ENST00000496332 HMGCRP04035 888 aa14.11□□□□□ -0.15
THBS3-208ENST00000496332 XRCC5P13010 732 aaKnown RBP14.11□□□□□ -0.15
THBS3-208ENST00000496332 DSG3P32926 999 aa14.11□□□□□ -0.15
THBS3-208ENST00000496332 RGS2P41220 211 aa14.11□□□□□ -0.15
THBS3-208ENST00000496332 TRIM32Q13049 653 aa14.11□□□□□ -0.15
THBS3-208ENST00000496332 MORN1Q5T089 497 aa14.11□□□□□ -0.15
THBS3-208ENST00000496332 WDR78Q5VTH9 848 aa14.11□□□□□ -0.15
THBS3-208ENST00000496332 PRPF38BQ5VTL8 546 aaKnown RBP14.11□□□□□ -0.15
THBS3-208ENST00000496332 PLEKHM2Q8IWE5 1019 aa14.11□□□□□ -0.15
THBS3-208ENST00000496332 U2AF1L4Q8WU68 220 aaKnown RBP14.11□□□□□ -0.15
THBS3-208ENST00000496332 TRIB2Q92519 343 aa14.11□□□□□ -0.15
THBS3-208ENST00000496332 USP6NLQ92738 828 aa14.11□□□□□ -0.15
THBS3-208ENST00000496332 GOPCQ9HD26 462 aa14.11□□□□□ -0.15
THBS3-208ENST00000496332 HELLSQ9NRZ9 838 aa14.11□□□□□ -0.15
THBS3-208ENST00000496332 MYH8P13535 1937 aa14.1□□□□□ -0.15
THBS3-208ENST00000496332 FOXP2O15409 715 aa14.1□□□□□ -0.15
THBS3-208ENST00000496332 SLC3A2P08195 630 aaKnown RBP14.1□□□□□ -0.15
THBS3-208ENST00000496332 IRX6P78412 446 aaPredicted RBP14.1□□□□□ -0.15
THBS3-208ENST00000496332 PDE4BQ07343 736 aa14.1□□□□□ -0.15
THBS3-208ENST00000496332 PPARAQ07869 468 aa14.1□□□□□ -0.15
THBS3-208ENST00000496332 VPS53Q5VIR6 699 aa14.1□□□□□ -0.15
THBS3-208ENST00000496332 SAMD1Q6SPF0 538 aaPredicted RBP14.1□□□□□ -0.15
THBS3-208ENST00000496332 TICAM2Q86XR7 235 aa14.1□□□□□ -0.15
THBS3-208ENST00000496332 RILPL2Q969X0 211 aa14.1□□□□□ -0.15
THBS3-208ENST00000496332 FAM227BQ96M60 508 aa14.1□□□□□ -0.15
THBS3-208ENST00000496332 DEFB118Q96PH6 123 aa14.1□□□□□ -0.15
THBS3-208ENST00000496332 PAK6Q9NQU5 681 aaPredicted RBP14.1□□□□□ -0.15
THBS3-208ENST00000496332 NYAP2Q9P242 653 aa14.1□□□□□ -0.15
THBS3-208ENST00000496332 DOCK3Q8IZD9 2030 aa14.1□□□□□ -0.15
THBS3-208ENST00000496332 IGKV6D-41A0A0C4DH26 115 aa14.09□□□□□ -0.15
THBS3-208ENST00000496332 A0A0D9SFI3 127 aa14.09□□□□□ -0.15
THBS3-208ENST00000496332 TFRCP02786 760 aaKnown RBP14.09□□□□□ -0.15
THBS3-208ENST00000496332 PTPREP23469 700 aa14.09□□□□□ -0.15
THBS3-208ENST00000496332 MAP2K5Q13163 448 aa14.09□□□□□ -0.15
THBS3-208ENST00000496332 MCMDC2Q4G0Z9 681 aa14.09□□□□□ -0.15
THBS3-208ENST00000496332 TRMT44Q8IYL2 757 aaKnown RBP14.09□□□□□ -0.15
THBS3-208ENST00000496332 MB21D1Q8N884 522 aa14.09□□□□□ -0.15
THBS3-208ENST00000496332 ATG4CQ96DT6 458 aa14.09□□□□□ -0.15
THBS3-208ENST00000496332 MOV10L1Q9BXT6 1211 aaKnown RBP14.09□□□□□ -0.15
THBS3-208ENST00000496332 SPATC1LQ9H0A9 340 aa14.09□□□□□ -0.15
THBS3-208ENST00000496332 XRN2Q9H0D6 950 aaKnown RBP eCLIP14.09□□□□□ -0.15
THBS3-208ENST00000496332 OSBPL3Q9H4L5 887 aa14.09□□□□□ -0.15
THBS3-208ENST00000496332 CLIP2Q9UDT6 1046 aa14.09□□□□□ -0.15
THBS3-208ENST00000496332 IVNS1ABPQ9Y6Y0 642 aa14.09□□□□□ -0.15
THBS3-208ENST00000496332 PDE4DIPQ5VU43 2346 aa14.09□□□□□ -0.15
THBS3-208ENST00000496332 PLXNB2O15031 1838 aa14.08□□□□□ -0.15
THBS3-208ENST00000496332 SLC15A5A6NIM6 579 aa14.08□□□□□ -0.16
THBS3-208ENST00000496332 F5H6K3 240 aa14.08□□□□□ -0.16
THBS3-208ENST00000496332 TSPY3P0CV98 308 aa14.08□□□□□ -0.16
THBS3-208ENST00000496332 TSPY8P0CW00 308 aa14.08□□□□□ -0.16
THBS3-208ENST00000496332 ZKSCAN1P17029 563 aaPredicted RBP14.08□□□□□ -0.16
THBS3-208ENST00000496332 TFAP4Q01664 338 aa14.08□□□□□ -0.16
THBS3-208ENST00000496332 CTDSPL2Q05D32 466 aa14.08□□□□□ -0.16
THBS3-208ENST00000496332 KLRC3Q07444 240 aa14.08□□□□□ -0.16
THBS3-208ENST00000496332 NMIQ13287 307 aaPredicted RBP14.08□□□□□ -0.16
THBS3-208ENST00000496332 PLS1Q14651 629 aa14.08□□□□□ -0.16
THBS3-208ENST00000496332 CCL14Q16627 93 aa14.08□□□□□ -0.16
THBS3-208ENST00000496332 FAM47AQ5JRC9 791 aa14.08□□□□□ -0.16
THBS3-208ENST00000496332 FAM83BQ5T0W9 1011 aa14.08□□□□□ -0.16
THBS3-208ENST00000496332 NEDD1Q8NHV4 660 aa14.08□□□□□ -0.16
THBS3-208ENST00000496332 CEP95Q96GE4 821 aa14.08□□□□□ -0.16
THBS3-208ENST00000496332 APBA2Q99767 749 aa14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms