RNA–Protein interactions for RNA: ENST00000487647.5

FGFR1-222, Transcript of fibroblast growth factor receptor 1, humanhuman

TSL 1 (best)

Gene FGFR1, Length 1,608 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR1-222ENST00000487647 TCP10L2B9ZVM9 353 aa17■□□□□ 0.31
FGFR1-222ENST00000487647 WNT10BO00744 389 aa17■□□□□ 0.31
FGFR1-222ENST00000487647 LMNB1P20700 586 aa17■□□□□ 0.31
FGFR1-222ENST00000487647 TNFAIP1Q13829 316 aa17■□□□□ 0.31
FGFR1-222ENST00000487647 PFKFB3Q16875 520 aaPredicted RBP17■□□□□ 0.31
FGFR1-222ENST00000487647 SPZ1Q9BXG8 430 aa17■□□□□ 0.31
FGFR1-222ENST00000487647 SH3GLB2Q9NR46 395 aa17■□□□□ 0.31
FGFR1-222ENST00000487647 POLR3EQ9NVU0 708 aa17■□□□□ 0.31
FGFR1-222ENST00000487647 NYAP2Q9P242 653 aa17■□□□□ 0.31
FGFR1-222ENST00000487647 SYNPO2Q9UMS6 1093 aa17■□□□□ 0.31
FGFR1-222ENST00000487647 CLRN2A0PK11 232 aa16.99■□□□□ 0.31
FGFR1-222ENST00000487647 GOLGA6L4A6NEF3 574 aa16.99■□□□□ 0.31
FGFR1-222ENST00000487647 MPHOSPH10O00566 681 aaKnown RBP16.99■□□□□ 0.31
FGFR1-222ENST00000487647 GADD45BO75293 160 aaPredicted RBP16.99■□□□□ 0.31
FGFR1-222ENST00000487647 SNHG28P0DPA3 235 aa16.99■□□□□ 0.31
FGFR1-222ENST00000487647 SCG2P13521 617 aa16.99■□□□□ 0.31
FGFR1-222ENST00000487647 ASPRV1Q53RT3 343 aa16.99■□□□□ 0.31
FGFR1-222ENST00000487647 ARHGAP27Q6ZUM4 889 aa16.99■□□□□ 0.31
FGFR1-222ENST00000487647 BRMS1Q9HCU9 246 aa16.99■□□□□ 0.31
FGFR1-222ENST00000487647 GJB4Q9NTQ9 266 aa16.99■□□□□ 0.31
FGFR1-222ENST00000487647 KLRF2D3W0D1 207 aa16.99■□□□□ 0.31
FGFR1-222ENST00000487647 YEATS4O95619 227 aa16.99■□□□□ 0.31
FGFR1-222ENST00000487647 GMPSP49915 693 aaPredicted RBP16.99■□□□□ 0.31
FGFR1-222ENST00000487647 ABCB5Q2M3G0 1257 aa16.99■□□□□ 0.31
FGFR1-222ENST00000487647 CAVIN1Q6NZI2 390 aaKnown RBP16.99■□□□□ 0.31
FGFR1-222ENST00000487647 NOSTRINQ8IVI9 506 aa16.99■□□□□ 0.31
FGFR1-222ENST00000487647 DIS3L2Q8IYB7 885 aaKnown RBP16.99■□□□□ 0.31
FGFR1-222ENST00000487647 USP28Q96RU2 1077 aa16.99■□□□□ 0.31
FGFR1-222ENST00000487647 PHF20Q9BVI0 1012 aa16.99■□□□□ 0.31
FGFR1-222ENST00000487647 GZF1Q9H116 711 aaPredicted RBP16.99■□□□□ 0.31
FGFR1-222ENST00000487647 VEZTQ9HBM0 779 aa16.99■□□□□ 0.31
FGFR1-222ENST00000487647 CABP5Q9NP86 173 aa16.99■□□□□ 0.31
FGFR1-222ENST00000487647 CLIP2Q9UDT6 1046 aa16.99■□□□□ 0.31
FGFR1-222ENST00000487647 CNTNAP1P78357 1384 aa16.98■□□□□ 0.31
FGFR1-222ENST00000487647 KIF28PB7ZC32 967 aa16.98■□□□□ 0.31
FGFR1-222ENST00000487647 UBE2Q2LH0YL09 131 aa16.98■□□□□ 0.31
FGFR1-222ENST00000487647 PDHBP11177 359 aa16.98■□□□□ 0.31
FGFR1-222ENST00000487647 NASPP49321 788 aaPredicted RBP16.98■□□□□ 0.31
FGFR1-222ENST00000487647 PRELPP51888 382 aa16.98■□□□□ 0.31
FGFR1-222ENST00000487647 RBM26Q5T8P6 1007 aaKnown RBP16.98■□□□□ 0.31
FGFR1-222ENST00000487647 STAG2Q8N3U4 1231 aa16.98■□□□□ 0.31
FGFR1-222ENST00000487647 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.98■□□□□ 0.31
FGFR1-222ENST00000487647 CNOT7Q9UIV1 285 aaKnown RBP16.98■□□□□ 0.31
FGFR1-222ENST00000487647 CALML3P27482 149 aa16.97■□□□□ 0.31
FGFR1-222ENST00000487647 MAP3K10Q02779 954 aa16.97■□□□□ 0.31
FGFR1-222ENST00000487647 GPATCH4Q5T3I0 446 aaKnown RBP16.97■□□□□ 0.31
FGFR1-222ENST00000487647 GALNT17Q6IS24 598 aa16.97■□□□□ 0.31
FGFR1-222ENST00000487647 MICALL2Q8IY33 904 aa16.97■□□□□ 0.31
FGFR1-222ENST00000487647 KCNG4Q8TDN1 519 aa16.97■□□□□ 0.31
FGFR1-222ENST00000487647 SYT17Q9BSW7 474 aa16.97■□□□□ 0.31
FGFR1-222ENST00000487647 H7C1D1 291 aa16.96■□□□□ 0.31
FGFR1-222ENST00000487647 KRT2P35908 639 aa16.96■□□□□ 0.31
FGFR1-222ENST00000487647 NBPF9Q3BBW0 867 aa16.96■□□□□ 0.31
FGFR1-222ENST00000487647 RILPL1Q5EBL4 403 aa16.96■□□□□ 0.31
FGFR1-222ENST00000487647 GPC2Q8N158 579 aa16.96■□□□□ 0.31
FGFR1-222ENST00000487647 VPS54Q9P1Q0 977 aa16.96■□□□□ 0.31
FGFR1-222ENST00000487647 KCNJ14Q9UNX9 436 aa16.96■□□□□ 0.31
FGFR1-222ENST00000487647 GJA3Q9Y6H8 435 aa16.96■□□□□ 0.31
FGFR1-222ENST00000487647 USP17L5A8MUK1 530 aa16.96■□□□□ 0.3
FGFR1-222ENST00000487647 BTBD18B2RXH4 712 aa16.96■□□□□ 0.3
FGFR1-222ENST00000487647 hCG_1984214I3L0E3 225 aa16.96■□□□□ 0.3
FGFR1-222ENST00000487647 LETM1O95202 739 aaPredicted RBP16.96■□□□□ 0.3
FGFR1-222ENST00000487647 ZNF445P59923 1031 aa16.96■□□□□ 0.3
FGFR1-222ENST00000487647 ANO1Q5XXA6 986 aa16.96■□□□□ 0.3
FGFR1-222ENST00000487647 USP17L2Q6R6M4 530 aa16.96■□□□□ 0.3
FGFR1-222ENST00000487647 ZNF713Q8N859 430 aaPredicted RBP16.96■□□□□ 0.3
FGFR1-222ENST00000487647 LINC00301Q8NCQ3 95 aa16.96■□□□□ 0.3
FGFR1-222ENST00000487647 CCDC148Q8NFR7 591 aa16.96■□□□□ 0.3
FGFR1-222ENST00000487647 CCDC12Q8WUD4 166 aaPredicted RBP16.96■□□□□ 0.3
FGFR1-222ENST00000487647 RRP36Q96EU6 259 aaKnown RBP16.96■□□□□ 0.3
FGFR1-222ENST00000487647 RIOX1Q9H6W3 641 aa16.96■□□□□ 0.3
FGFR1-222ENST00000487647 PGAP2Q9UHJ9 254 aa16.96■□□□□ 0.3
FGFR1-222ENST00000487647 EEF2P13639 858 aaKnown RBP16.95■□□□□ 0.3
FGFR1-222ENST00000487647 ICA1Q05084 483 aa16.95■□□□□ 0.3
FGFR1-222ENST00000487647 ZNF543Q08ER8 600 aa16.95■□□□□ 0.3
FGFR1-222ENST00000487647 STK38Q15208 465 aa16.95■□□□□ 0.3
FGFR1-222ENST00000487647 ZSCAN23Q3MJ62 389 aa16.95■□□□□ 0.3
FGFR1-222ENST00000487647 JMYQ8N9B5 988 aa16.95■□□□□ 0.3
FGFR1-222ENST00000487647 DCAF4Q8WV16 495 aa16.95■□□□□ 0.3
FGFR1-222ENST00000487647 TMEM63CQ9P1W3 806 aa16.95■□□□□ 0.3
FGFR1-222ENST00000487647 GREB1LQ9C091 1923 aaPredicted RBP16.95■□□□□ 0.3
FGFR1-222ENST00000487647 TCHHQ07283 1943 aa16.94■□□□□ 0.3
FGFR1-222ENST00000487647 CYTH3O43739 400 aa16.94■□□□□ 0.3
FGFR1-222ENST00000487647 SLC39A14Q15043 492 aa16.94■□□□□ 0.3
FGFR1-222ENST00000487647 SF3A1Q15459 793 aaKnown RBP16.94■□□□□ 0.3
FGFR1-222ENST00000487647 CCDC183Q5T5S1 534 aa16.94■□□□□ 0.3
FGFR1-222ENST00000487647 LRRC47Q8N1G4 583 aaKnown RBP16.94■□□□□ 0.3
FGFR1-222ENST00000487647 GMCL1P1Q8NEA9 526 aa16.94■□□□□ 0.3
FGFR1-222ENST00000487647 SEC63Q9UGP8 760 aaKnown RBP16.94■□□□□ 0.3
FGFR1-222ENST00000487647 SIPA1L1O43166 1804 aa16.94■□□□□ 0.3
FGFR1-222ENST00000487647 ZNF541Q9H0D2 1346 aa16.93■□□□□ 0.3
FGFR1-222ENST00000487647 A0A1W2PQ27 194 aa16.93■□□□□ 0.3
FGFR1-222ENST00000487647 A0A1W2PQ64 194 aa16.93■□□□□ 0.3
FGFR1-222ENST00000487647 A0A1W2PQD8 194 aa16.93■□□□□ 0.3
FGFR1-222ENST00000487647 hCG_1642624A0A1W2PR95 340 aa16.93■□□□□ 0.3
FGFR1-222ENST00000487647 FAM196BA6NMK8 535 aa16.93■□□□□ 0.3
FGFR1-222ENST00000487647 SPTLC2O15270 562 aa16.93■□□□□ 0.3
FGFR1-222ENST00000487647 GOLGA8HP0CJ92 632 aa16.93■□□□□ 0.3
FGFR1-222ENST00000487647 NLRP5P59047 1200 aa16.93■□□□□ 0.3
FGFR1-222ENST00000487647 CEBPZQ03701 1054 aaKnown RBP16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms