RNA–Protein interactions for RNA: ENST00000485091.5

CCDC78-214, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 1,734 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-214ENST00000485091 CDKL5O76039 1030 aa20.34■□□□□ 0.85
CCDC78-214ENST00000485091 NTRK3Q16288 839 aa20.34■□□□□ 0.85
CCDC78-214ENST00000485091 PPP4R3BQ5MIZ7 849 aa20.34■□□□□ 0.85
CCDC78-214ENST00000485091 CCDC84Q86UT8 332 aaPredicted RBP20.34■□□□□ 0.85
CCDC78-214ENST00000485091 SIAH1Q8IUQ4 282 aa20.34■□□□□ 0.85
CCDC78-214ENST00000485091 SLC26A6Q9BXS9 759 aa20.34■□□□□ 0.85
CCDC78-214ENST00000485091 GLIS2Q9BZE0 524 aaPredicted RBP20.34■□□□□ 0.85
CCDC78-214ENST00000485091 RBM28Q9NW13 759 aaKnown RBP20.34■□□□□ 0.85
CCDC78-214ENST00000485091 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.34■□□□□ 0.85
CCDC78-214ENST00000485091 NYAP2Q9P242 653 aa20.34■□□□□ 0.85
CCDC78-214ENST00000485091 USP17L5A8MUK1 530 aa20.33■□□□□ 0.85
CCDC78-214ENST00000485091 GOLGA8HP0CJ92 632 aa20.33■□□□□ 0.85
CCDC78-214ENST00000485091 FDPSP14324 419 aaKnown RBP20.33■□□□□ 0.85
CCDC78-214ENST00000485091 VEGFAP15692 232 aaPredicted RBP20.33■□□□□ 0.85
CCDC78-214ENST00000485091 INPP5BP32019 993 aa20.33■□□□□ 0.85
CCDC78-214ENST00000485091 HMGN5P82970 282 aaKnown RBP20.33■□□□□ 0.85
CCDC78-214ENST00000485091 STAG2Q8N3U4 1231 aa20.33■□□□□ 0.85
CCDC78-214ENST00000485091 WRNIP1Q96S55 665 aa20.33■□□□□ 0.85
CCDC78-214ENST00000485091 ORC3Q9UBD5 711 aaPredicted RBP20.33■□□□□ 0.85
CCDC78-214ENST00000485091 CIZ1Q9ULV3 898 aaPredicted RBP20.33■□□□□ 0.85
CCDC78-214ENST00000485091 KIF5BP33176 963 aa20.33■□□□□ 0.84
CCDC78-214ENST00000485091 SSRP1Q08945 709 aaKnown RBP20.33■□□□□ 0.84
CCDC78-214ENST00000485091 GRM4Q14833 912 aa20.33■□□□□ 0.84
CCDC78-214ENST00000485091 LARP1BQ659C4 914 aaKnown RBP20.33■□□□□ 0.84
CCDC78-214ENST00000485091 USP17L2Q6R6M4 530 aa20.33■□□□□ 0.84
CCDC78-214ENST00000485091 SSC5DA1L4H1 1573 aa20.33■□□□□ 0.84
CCDC78-214ENST00000485091 FRMPD2Q68DX3 1309 aaPredicted RBP20.32■□□□□ 0.84
CCDC78-214ENST00000485091 IFNAR1P17181 557 aa20.32■□□□□ 0.84
CCDC78-214ENST00000485091 SYT1P21579 422 aa20.32■□□□□ 0.84
CCDC78-214ENST00000485091 PPP2R5BQ15173 497 aa20.32■□□□□ 0.84
CCDC78-214ENST00000485091 ZKSCAN4Q969J2 545 aaPredicted RBP20.32■□□□□ 0.84
CCDC78-214ENST00000485091 CDCA5Q96FF9 252 aa20.32■□□□□ 0.84
CCDC78-214ENST00000485091 NMRK2Q9NPI5 230 aa20.32■□□□□ 0.84
CCDC78-214ENST00000485091 MAD2L2Q9UI95 211 aa20.32■□□□□ 0.84
CCDC78-214ENST00000485091 ISY1Q9ULR0 285 aaKnown RBP20.32■□□□□ 0.84
CCDC78-214ENST00000485091 CTNND1O60716 968 aaKnown RBP20.31■□□□□ 0.84
CCDC78-214ENST00000485091 ASNSP08243 561 aa20.31■□□□□ 0.84
CCDC78-214ENST00000485091 PARP1P09874 1014 aaKnown RBP20.31■□□□□ 0.84
CCDC78-214ENST00000485091 ECE1P42892 770 aa20.31■□□□□ 0.84
CCDC78-214ENST00000485091 MAP1SQ66K74 1059 aaPredicted RBP20.31■□□□□ 0.84
CCDC78-214ENST00000485091 TMTC3Q6ZXV5 915 aa20.31■□□□□ 0.84
CCDC78-214ENST00000485091 SRBD1Q8N5C6 995 aaKnown RBP20.31■□□□□ 0.84
CCDC78-214ENST00000485091 ACER1Q8TDN7 264 aa20.31■□□□□ 0.84
CCDC78-214ENST00000485091 PIBF1Q8WXW3 757 aa20.31■□□□□ 0.84
CCDC78-214ENST00000485091 MKL1Q969V6 931 aa20.31■□□□□ 0.84
CCDC78-214ENST00000485091 ARHGEF10LQ9HCE6 1279 aa20.31■□□□□ 0.84
CCDC78-214ENST00000485091 MYH4Q9Y623 1939 aa20.31■□□□□ 0.84
CCDC78-214ENST00000485091 hCG_1642624A0A1W2PR95 340 aa20.3■□□□□ 0.84
CCDC78-214ENST00000485091 A0A1W2PRG0 241 aa20.3■□□□□ 0.84
CCDC78-214ENST00000485091 VPS37CA5D8V6 355 aaPredicted RBP20.3■□□□□ 0.84
CCDC78-214ENST00000485091 UBE2Q2LH0YL09 131 aa20.3■□□□□ 0.84
CCDC78-214ENST00000485091 PDHBP11177 359 aa20.3■□□□□ 0.84
CCDC78-214ENST00000485091 NUCB2P80303 420 aa20.3■□□□□ 0.84
CCDC78-214ENST00000485091 CDC37L1Q7L3B6 337 aa20.3■□□□□ 0.84
CCDC78-214ENST00000485091 MAP3K14Q99558 947 aa20.3■□□□□ 0.84
CCDC78-214ENST00000485091 STX6O43752 255 aa20.3■□□□□ 0.84
CCDC78-214ENST00000485091 FMNL1O95466 1100 aaPredicted RBP20.3■□□□□ 0.84
CCDC78-214ENST00000485091 ZYXQ15942 572 aaKnown RBP20.3■□□□□ 0.84
CCDC78-214ENST00000485091 NBPF11Q86T75 865 aa20.3■□□□□ 0.84
CCDC78-214ENST00000485091 TRIM22Q8IYM9 498 aa20.3■□□□□ 0.84
CCDC78-214ENST00000485091 CPVLQ9H3G5 476 aa20.3■□□□□ 0.84
CCDC78-214ENST00000485091 GPCPD1Q9NPB8 672 aa20.3■□□□□ 0.84
CCDC78-214ENST00000485091 ZNF112Q9UJU3 913 aa20.3■□□□□ 0.84
CCDC78-214ENST00000485091 PALM3A6NDB9 673 aaPredicted RBP20.29■□□□□ 0.84
CCDC78-214ENST00000485091 USP2O75604 605 aaPredicted RBP20.29■□□□□ 0.84
CCDC78-214ENST00000485091 CCDC96Q2M329 555 aa20.29■□□□□ 0.84
CCDC78-214ENST00000485091 SLFN13Q68D06 897 aa20.29■□□□□ 0.84
CCDC78-214ENST00000485091 KLRG1Q96E93 195 aa20.29■□□□□ 0.84
CCDC78-214ENST00000485091 AIFM3Q96NN9 605 aa20.29■□□□□ 0.84
CCDC78-214ENST00000485091 ZDHHC9Q9Y397 364 aa20.29■□□□□ 0.84
CCDC78-214ENST00000485091 KIF3AQ9Y496 699 aa20.29■□□□□ 0.84
CCDC78-214ENST00000485091 KLRF2D3W0D1 207 aa20.28■□□□□ 0.84
CCDC78-214ENST00000485091 F5H6K3 240 aa20.28■□□□□ 0.84
CCDC78-214ENST00000485091 PDCP20941 246 aa20.28■□□□□ 0.84
CCDC78-214ENST00000485091 NF2P35240 595 aa20.28■□□□□ 0.84
CCDC78-214ENST00000485091 AKAP17AQ02040 695 aaKnown RBP20.28■□□□□ 0.84
CCDC78-214ENST00000485091 GUCY1B3Q02153 619 aa20.28■□□□□ 0.84
CCDC78-214ENST00000485091 KLRC3Q07444 240 aa20.28■□□□□ 0.84
CCDC78-214ENST00000485091 V9GY48 417 aaPredicted RBP20.28■□□□□ 0.84
CCDC78-214ENST00000485091 ATAD5Q96QE3 1844 aa20.28■□□□□ 0.84
CCDC78-214ENST00000485091 H3BQV1 296 aa20.27■□□□□ 0.84
CCDC78-214ENST00000485091 PPP1R12BO60237 982 aaPredicted RBP20.27■□□□□ 0.84
CCDC78-214ENST00000485091 GNAQP50148 359 aa20.27■□□□□ 0.84
CCDC78-214ENST00000485091 FUT2Q10981 343 aa20.27■□□□□ 0.84
CCDC78-214ENST00000485091 TTLL12Q14166 644 aaPredicted RBP20.27■□□□□ 0.84
CCDC78-214ENST00000485091 IFFO2Q5TF58 517 aa20.27■□□□□ 0.84
CCDC78-214ENST00000485091 KCTD1Q719H9 257 aa20.27■□□□□ 0.84
CCDC78-214ENST00000485091 SCYL3Q8IZE3 742 aa20.27■□□□□ 0.84
CCDC78-214ENST00000485091 ALG1Q9BT22 464 aa20.27■□□□□ 0.84
CCDC78-214ENST00000485091 UBA5Q9GZZ9 404 aa20.27■□□□□ 0.84
CCDC78-214ENST00000485091 PICK1Q9NRD5 415 aa20.27■□□□□ 0.84
CCDC78-214ENST00000485091 CNTNAP5Q8WYK1 1306 aa20.27■□□□□ 0.84
CCDC78-214ENST00000485091 FMR1Q06787 632 aaKnown RBP eCLIP20.27■□□□□ 0.83
CCDC78-214ENST00000485091 OTUD7BQ6GQQ9 843 aa20.27■□□□□ 0.83
CCDC78-214ENST00000485091 SPICE1Q8N0Z3 855 aa20.27■□□□□ 0.83
CCDC78-214ENST00000485091 NUP88Q99567 741 aaPredicted RBP20.27■□□□□ 0.83
CCDC78-214ENST00000485091 ZNF408Q9H9D4 720 aa20.27■□□□□ 0.83
CCDC78-214ENST00000485091 VAT1LQ9HCJ6 419 aa20.27■□□□□ 0.83
CCDC78-214ENST00000485091 GJB4Q9NTQ9 266 aa20.27■□□□□ 0.83
CCDC78-214ENST00000485091 MTMR6Q9Y217 621 aa20.27■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms