RNA–Protein interactions for RNA: ENST00000484112.5

CPSF4-213, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 825 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-213ENST00000484112 ABCB5Q2M3G0 1257 aa12.03□□□□□ -0.48
CPSF4-213ENST00000484112 CERKLQ49MI3 558 aaPredicted RBP12.03□□□□□ -0.48
CPSF4-213ENST00000484112 SLC9C2Q5TAH2 1124 aa12.03□□□□□ -0.48
CPSF4-213ENST00000484112 ANKRD45Q5TZF3 282 aa12.03□□□□□ -0.48
CPSF4-213ENST00000484112 TATDN1Q6P1N9 297 aa12.03□□□□□ -0.48
CPSF4-213ENST00000484112 MAGEB6Q8N7X4 407 aa12.03□□□□□ -0.48
CPSF4-213ENST00000484112 NPLOC4Q8TAT6 608 aa12.03□□□□□ -0.48
CPSF4-213ENST00000484112 ACER1Q8TDN7 264 aa12.03□□□□□ -0.48
CPSF4-213ENST00000484112 C12orf42Q96LP6 360 aa12.03□□□□□ -0.48
CPSF4-213ENST00000484112 ANTXR1Q9H6X2 564 aa12.03□□□□□ -0.48
CPSF4-213ENST00000484112 CABP5Q9NP86 173 aa12.03□□□□□ -0.48
CPSF4-213ENST00000484112 BTBD7Q9P203 1132 aa12.03□□□□□ -0.48
CPSF4-213ENST00000484112 SERPINB13Q9UIV8 391 aa12.03□□□□□ -0.48
CPSF4-213ENST00000484112 ZFYP08048 801 aaPredicted RBP12.02□□□□□ -0.49
CPSF4-213ENST00000484112 PDE6AP16499 860 aa12.02□□□□□ -0.49
CPSF4-213ENST00000484112 VCAM1P19320 739 aa12.02□□□□□ -0.49
CPSF4-213ENST00000484112 GJC2Q5T442 439 aaPredicted RBP12.02□□□□□ -0.49
CPSF4-213ENST00000484112 ANO1Q5XXA6 986 aa12.02□□□□□ -0.49
CPSF4-213ENST00000484112 DPP9Q86TI2 863 aa12.02□□□□□ -0.49
CPSF4-213ENST00000484112 TTC6Q86TZ1 520 aa12.02□□□□□ -0.49
CPSF4-213ENST00000484112 LPAR1Q92633 364 aa12.02□□□□□ -0.49
CPSF4-213ENST00000484112 GUCD1Q96NT3 240 aa12.02□□□□□ -0.49
CPSF4-213ENST00000484112 COL25A1Q9BXS0 654 aaPredicted RBP12.02□□□□□ -0.49
CPSF4-213ENST00000484112 RPAP3Q9H6T3 665 aaPredicted RBP12.02□□□□□ -0.49
CPSF4-213ENST00000484112 ATP11BQ9Y2G3 1177 aa12.02□□□□□ -0.49
CPSF4-213ENST00000484112 SALL3Q9BXA9 1300 aa12.02□□□□□ -0.49
CPSF4-213ENST00000484112 POTEB2H3BUK9 544 aa12.01□□□□□ -0.49
CPSF4-213ENST00000484112 MPHOSPH10O00566 681 aaKnown RBP12.01□□□□□ -0.49
CPSF4-213ENST00000484112 MSCO60682 206 aa12.01□□□□□ -0.49
CPSF4-213ENST00000484112 POLR3DP05423 398 aaPredicted RBP12.01□□□□□ -0.49
CPSF4-213ENST00000484112 RTP1P59025 263 aa12.01□□□□□ -0.49
CPSF4-213ENST00000484112 NUCB1Q02818 461 aa12.01□□□□□ -0.49
CPSF4-213ENST00000484112 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.01□□□□□ -0.49
CPSF4-213ENST00000484112 KBTBD3Q8NAB2 608 aa12.01□□□□□ -0.49
CPSF4-213ENST00000484112 TRPV1Q8NER1 839 aa12.01□□□□□ -0.49
CPSF4-213ENST00000484112 KIAA1683Q9H0B3 1180 aa12.01□□□□□ -0.49
CPSF4-213ENST00000484112 PRDM5Q9NQX1 630 aaPredicted RBP12.01□□□□□ -0.49
CPSF4-213ENST00000484112 MAGEB6P1A0A0J9YX57 407 aa12□□□□□ -0.49
CPSF4-213ENST00000484112 TCRBV5S4A2TA0A5A2 114 aa12□□□□□ -0.49
CPSF4-213ENST00000484112 SPDYE16A6NNV3 312 aaPredicted RBP12□□□□□ -0.49
CPSF4-213ENST00000484112 DNM1LO00429 736 aa12□□□□□ -0.49
CPSF4-213ENST00000484112 IGHDP01880 384 aa12□□□□□ -0.49
CPSF4-213ENST00000484112 ADD2P35612 726 aa12□□□□□ -0.49
CPSF4-213ENST00000484112 PLCD1P51178 756 aa12□□□□□ -0.49
CPSF4-213ENST00000484112 GRB14Q14449 540 aa12□□□□□ -0.49
CPSF4-213ENST00000484112 SEPT2Q15019 361 aa12□□□□□ -0.49
CPSF4-213ENST00000484112 ZNF697Q5TEC3 545 aa12□□□□□ -0.49
CPSF4-213ENST00000484112 CHD1LQ86WJ1 897 aa12□□□□□ -0.49
CPSF4-213ENST00000484112 PI4K2BQ8TCG2 481 aa12□□□□□ -0.49
CPSF4-213ENST00000484112 RIOK1Q9BRS2 568 aaKnown RBP12□□□□□ -0.49
CPSF4-213ENST00000484112 EHD4Q9H223 541 aa12□□□□□ -0.49
CPSF4-213ENST00000484112 OSBPL3Q9H4L5 887 aa12□□□□□ -0.49
CPSF4-213ENST00000484112 ZNF532Q9HCE3 1301 aa12□□□□□ -0.49
CPSF4-213ENST00000484112 FOCADQ5VW36 1801 aa12□□□□□ -0.49
CPSF4-213ENST00000484112 KBTBD13C9JR72 458 aa11.99□□□□□ -0.49
CPSF4-213ENST00000484112 HOXC6P09630 235 aa11.99□□□□□ -0.49
CPSF4-213ENST00000484112 ADORA2AP29274 412 aa11.99□□□□□ -0.49
CPSF4-213ENST00000484112 SHMT1P34896 483 aa11.99□□□□□ -0.49
CPSF4-213ENST00000484112 PDE1AP54750 535 aa11.99□□□□□ -0.49
CPSF4-213ENST00000484112 PLS1Q14651 629 aa11.99□□□□□ -0.49
CPSF4-213ENST00000484112 SHHQ15465 462 aa11.99□□□□□ -0.49
CPSF4-213ENST00000484112 FAM109BQ6ICB4 259 aaPredicted RBP11.99□□□□□ -0.49
CPSF4-213ENST00000484112 SAMD1Q6SPF0 538 aaPredicted RBP11.99□□□□□ -0.49
CPSF4-213ENST00000484112 LBX2Q6XYB7 198 aa11.99□□□□□ -0.49
CPSF4-213ENST00000484112 SLC39A5Q6ZMH5 540 aa11.99□□□□□ -0.49
CPSF4-213ENST00000484112 ARRDC4Q8NCT1 418 aa11.99□□□□□ -0.49
CPSF4-213ENST00000484112 MOV10L1Q9BXT6 1211 aaKnown RBP11.99□□□□□ -0.49
CPSF4-213ENST00000484112 CRNKL1Q9BZJ0 848 aaKnown RBP11.99□□□□□ -0.49
CPSF4-213ENST00000484112 TANGO6Q9C0B7 1094 aa11.99□□□□□ -0.49
CPSF4-213ENST00000484112 BCL11AQ9H165 835 aa11.99□□□□□ -0.49
CPSF4-213ENST00000484112 CDK5RAP2Q96SN8 1893 aa11.99□□□□□ -0.49
CPSF4-213ENST00000484112 MYO5AQ9Y4I1 1855 aaKnown RBP11.99□□□□□ -0.49
CPSF4-213ENST00000484112 LAMA3Q16787 3333 aa11.99□□□□□ -0.49
CPSF4-213ENST00000484112 CYBAP13498 195 aa11.98□□□□□ -0.49
CPSF4-213ENST00000484112 ERCC3P19447 782 aa11.98□□□□□ -0.49
CPSF4-213ENST00000484112 GUCY1A2P33402 732 aa11.98□□□□□ -0.49
CPSF4-213ENST00000484112 COG2Q14746 738 aa11.98□□□□□ -0.49
CPSF4-213ENST00000484112 PRAMEF19Q5SWL8 479 aa11.98□□□□□ -0.49
CPSF4-213ENST00000484112 FERMT2Q96AC1 680 aa11.98□□□□□ -0.49
CPSF4-213ENST00000484112 EVI5LQ96CN4 794 aa11.98□□□□□ -0.49
CPSF4-213ENST00000484112 ATP8A2Q9NTI2 1148 aa11.98□□□□□ -0.49
CPSF4-213ENST00000484112 MCM9Q9NXL9 1143 aa11.98□□□□□ -0.49
CPSF4-213ENST00000484112 HOXC10Q9NYD6 342 aa11.98□□□□□ -0.49
CPSF4-213ENST00000484112 A0A1W2PRG0 241 aa11.97□□□□□ -0.49
CPSF4-213ENST00000484112 CENPBP07199 599 aaPredicted RBP11.97□□□□□ -0.49
CPSF4-213ENST00000484112 ADCYAP1R1P41586 468 aa11.97□□□□□ -0.49
CPSF4-213ENST00000484112 EVX2Q03828 476 aa11.97□□□□□ -0.49
CPSF4-213ENST00000484112 TRIM60Q495X7 471 aa11.97□□□□□ -0.49
CPSF4-213ENST00000484112 C9orf50Q5SZB4 431 aa11.97□□□□□ -0.49
CPSF4-213ENST00000484112 NCAPG2Q86XI2 1143 aa11.97□□□□□ -0.49
CPSF4-213ENST00000484112 APPBP2Q92624 585 aa11.97□□□□□ -0.49
CPSF4-213ENST00000484112 BADQ92934 168 aa11.97□□□□□ -0.49
CPSF4-213ENST00000484112 CDX2Q99626 313 aaPredicted RBP11.97□□□□□ -0.49
CPSF4-213ENST00000484112 LNPKQ9C0E8 428 aa11.97□□□□□ -0.49
CPSF4-213ENST00000484112 SPATC1LQ9H0A9 340 aa11.97□□□□□ -0.49
CPSF4-213ENST00000484112 MYH1P12882 1939 aa11.97□□□□□ -0.49
CPSF4-213ENST00000484112 MYH7P12883 1935 aa11.97□□□□□ -0.49
CPSF4-213ENST00000484112 RNF113AO15541 343 aaKnown RBP11.96□□□□□ -0.49
CPSF4-213ENST00000484112 SEPT4O43236 478 aa11.96□□□□□ -0.49
CPSF4-213ENST00000484112 STRNO43815 780 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms