RNA–Protein interactions for RNA: ENST00000484087.5

BRCA1-216, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 1,495 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-216ENST00000484087 PSMA5P28066 241 aa8.19□□□□□ -1.1
BRCA1-216ENST00000484087 HMGCS2P54868 508 aa8.19□□□□□ -1.1
BRCA1-216ENST00000484087 SPP2Q13103 211 aa8.19□□□□□ -1.1
BRCA1-216ENST00000484087 MTMR2Q13614 643 aa8.19□□□□□ -1.1
BRCA1-216ENST00000484087 KRT32Q14532 448 aa8.19□□□□□ -1.1
BRCA1-216ENST00000484087 MCMDC2Q4G0Z9 681 aa8.19□□□□□ -1.1
BRCA1-216ENST00000484087 ZSCAN25Q6NSZ9 544 aa8.19□□□□□ -1.1
BRCA1-216ENST00000484087 FAM227BQ96M60 508 aa8.19□□□□□ -1.1
BRCA1-216ENST00000484087 TRIM34Q9BYJ4 488 aa8.19□□□□□ -1.1
BRCA1-216ENST00000484087 CRNKL1Q9BZJ0 848 aaKnown RBP8.19□□□□□ -1.1
BRCA1-216ENST00000484087 DDX24Q9GZR7 859 aaKnown RBP eCLIP8.19□□□□□ -1.1
BRCA1-216ENST00000484087 EPB41L4AQ9HCS5 686 aaPredicted RBP8.19□□□□□ -1.1
BRCA1-216ENST00000484087 HELLSQ9NRZ9 838 aa8.19□□□□□ -1.1
BRCA1-216ENST00000484087 PI4KBQ9UBF8 816 aa8.19□□□□□ -1.1
BRCA1-216ENST00000484087 ZBTB21Q9ULJ3 1066 aa8.19□□□□□ -1.1
BRCA1-216ENST00000484087 SLC4A4Q9Y6R1 1079 aa8.19□□□□□ -1.1
BRCA1-216ENST00000484087 A0A0D9SFI3 127 aa8.19□□□□□ -1.1
BRCA1-216ENST00000484087 A0A0G2JLL6 359 aaPredicted RBP8.19□□□□□ -1.1
BRCA1-216ENST00000484087 TBC1D12O60347 775 aa8.19□□□□□ -1.1
BRCA1-216ENST00000484087 FKTNO75072 461 aa8.19□□□□□ -1.1
BRCA1-216ENST00000484087 CD2BP2O95400 341 aaKnown RBP8.19□□□□□ -1.1
BRCA1-216ENST00000484087 POLR3DP05423 398 aaPredicted RBP8.19□□□□□ -1.1
BRCA1-216ENST00000484087 SHMT1P34896 483 aa8.19□□□□□ -1.1
BRCA1-216ENST00000484087 SOX10P56693 466 aa8.19□□□□□ -1.1
BRCA1-216ENST00000484087 NUCB2P80303 420 aa8.19□□□□□ -1.1
BRCA1-216ENST00000484087 PRRT2Q7Z6L0 340 aaPredicted RBP8.19□□□□□ -1.1
BRCA1-216ENST00000484087 CTU1Q7Z7A3 348 aaKnown RBP8.19□□□□□ -1.1
BRCA1-216ENST00000484087 MAP4K1Q92918 833 aa8.19□□□□□ -1.1
BRCA1-216ENST00000484087 IL25Q9H293 177 aa8.19□□□□□ -1.1
BRCA1-216ENST00000484087 DHX36Q9H2U1 1008 aaKnown RBP8.19□□□□□ -1.1
BRCA1-216ENST00000484087 HERC5Q9UII4 1024 aaKnown RBP8.19□□□□□ -1.1
BRCA1-216ENST00000484087 TRIM17Q9Y577 477 aa8.19□□□□□ -1.1
BRCA1-216ENST00000484087 RBM8AQ9Y5S9 174 aaKnown RBP8.19□□□□□ -1.1
BRCA1-216ENST00000484087 SNX14Q9Y5W7 946 aa8.19□□□□□ -1.1
BRCA1-216ENST00000484087 CYP46A1Q9Y6A2 500 aa8.19□□□□□ -1.1
BRCA1-216ENST00000484087 ADGRA2Q96PE1 1338 aa8.18□□□□□ -1.1
BRCA1-216ENST00000484087 GREB1LQ9C091 1923 aaPredicted RBP8.18□□□□□ -1.1
BRCA1-216ENST00000484087 DOCK3Q8IZD9 2030 aa8.18□□□□□ -1.1
BRCA1-216ENST00000484087 RNF113AO15541 343 aaKnown RBP8.18□□□□□ -1.1
BRCA1-216ENST00000484087 GPAA1O43292 621 aa8.18□□□□□ -1.1
BRCA1-216ENST00000484087 ALDH1A1P00352 501 aa8.18□□□□□ -1.1
BRCA1-216ENST00000484087 MYCP01106 439 aaPredicted RBP8.18□□□□□ -1.1
BRCA1-216ENST00000484087 GUCY1A2P33402 732 aa8.18□□□□□ -1.1
BRCA1-216ENST00000484087 INHBEP58166 350 aa8.18□□□□□ -1.1
BRCA1-216ENST00000484087 PTH1RQ03431 593 aa8.18□□□□□ -1.1
BRCA1-216ENST00000484087 RAB3GAP1Q15042 981 aa8.18□□□□□ -1.1
BRCA1-216ENST00000484087 NECTIN1Q15223 517 aa8.18□□□□□ -1.1
BRCA1-216ENST00000484087 UBE3CQ15386 1083 aa8.18□□□□□ -1.1
BRCA1-216ENST00000484087 OTOP1Q7RTM1 612 aa8.18□□□□□ -1.1
BRCA1-216ENST00000484087 ACER1Q8TDN7 264 aa8.18□□□□□ -1.1
BRCA1-216ENST00000484087 GBP4Q96PP9 640 aa8.18□□□□□ -1.1
BRCA1-216ENST00000484087 CFHR5Q9BXR6 569 aa8.18□□□□□ -1.1
BRCA1-216ENST00000484087 TM6SF1Q9BZW5 370 aa8.18□□□□□ -1.1
BRCA1-216ENST00000484087 SERPINB13Q9UIV8 391 aa8.18□□□□□ -1.1
BRCA1-216ENST00000484087 PARP14Q460N5 1801 aa8.18□□□□□ -1.1
BRCA1-216ENST00000484087 MYH4Q9Y623 1939 aa8.18□□□□□ -1.1
BRCA1-216ENST00000484087 PLXNB2O15031 1838 aa8.17□□□□□ -1.1
BRCA1-216ENST00000484087 USP17L5A8MUK1 530 aa8.17□□□□□ -1.1
BRCA1-216ENST00000484087 USP17L12C9JPN9 530 aa8.17□□□□□ -1.1
BRCA1-216ENST00000484087 USP17L21D6R901 530 aa8.17□□□□□ -1.1
BRCA1-216ENST00000484087 MPHOSPH10O00566 681 aaKnown RBP8.17□□□□□ -1.1
BRCA1-216ENST00000484087 FOXP2O15409 715 aa8.17□□□□□ -1.1
BRCA1-216ENST00000484087 AKR1B1P15121 316 aa8.17□□□□□ -1.1
BRCA1-216ENST00000484087 CASTP20810 708 aaKnown RBP8.17□□□□□ -1.1
BRCA1-216ENST00000484087 PTMSP20962 102 aa8.17□□□□□ -1.1
BRCA1-216ENST00000484087 SP3Q02447 781 aa8.17□□□□□ -1.1
BRCA1-216ENST00000484087 GABPAQ06546 454 aa8.17□□□□□ -1.1
BRCA1-216ENST00000484087 SEPT2Q15019 361 aa8.17□□□□□ -1.1
BRCA1-216ENST00000484087 ANKRD1Q15327 319 aa8.17□□□□□ -1.1
BRCA1-216ENST00000484087 VPS53Q5VIR6 699 aa8.17□□□□□ -1.1
BRCA1-216ENST00000484087 CREB3L3Q68CJ9 461 aa8.17□□□□□ -1.1
BRCA1-216ENST00000484087 OTUD7BQ6GQQ9 843 aa8.17□□□□□ -1.1
BRCA1-216ENST00000484087 TATDN1Q6P1N9 297 aa8.17□□□□□ -1.1
BRCA1-216ENST00000484087 ANKRD23Q86SG2 305 aa8.17□□□□□ -1.1
BRCA1-216ENST00000484087 METTL16Q86W50 562 aaKnown RBP8.17□□□□□ -1.1
BRCA1-216ENST00000484087 ZNF280CQ8ND82 737 aa8.17□□□□□ -1.1
BRCA1-216ENST00000484087 APPBP2Q92624 585 aa8.17□□□□□ -1.1
BRCA1-216ENST00000484087 KCNB2Q92953 911 aa8.17□□□□□ -1.1
BRCA1-216ENST00000484087 TMX3Q96JJ7 454 aa8.17□□□□□ -1.1
BRCA1-216ENST00000484087 JAKMIP1Q96N16 626 aaKnown RBP8.17□□□□□ -1.1
BRCA1-216ENST00000484087 STRBPQ96SI9 672 aaKnown RBP8.17□□□□□ -1.1
BRCA1-216ENST00000484087 UPF3BQ9BZI7 483 aaKnown RBP8.17□□□□□ -1.1
BRCA1-216ENST00000484087 ZFYVE28Q9HCC9 887 aa8.17□□□□□ -1.1
BRCA1-216ENST00000484087 HPS5Q9UPZ3 1129 aa8.17□□□□□ -1.1
BRCA1-216ENST00000484087 COL11A1P12107 1806 aaPredicted RBP8.16□□□□□ -1.1
BRCA1-216ENST00000484087 DDX11L8A8MPP1 907 aa8.16□□□□□ -1.1
BRCA1-216ENST00000484087 GSG1L2A8MUP6 293 aa8.16□□□□□ -1.1
BRCA1-216ENST00000484087 GOLGA6L22H0YM25 854 aa8.16□□□□□ -1.1
BRCA1-216ENST00000484087 SLC27A2O14975 620 aa8.16□□□□□ -1.1
BRCA1-216ENST00000484087 TLR2O60603 784 aa8.16□□□□□ -1.1
BRCA1-216ENST00000484087 PRDM1O75626 825 aa8.16□□□□□ -1.1
BRCA1-216ENST00000484087 ABCB5Q2M3G0 1257 aa8.16□□□□□ -1.1
BRCA1-216ENST00000484087 CERKLQ49MI3 558 aaPredicted RBP8.16□□□□□ -1.1
BRCA1-216ENST00000484087 KIAA1755Q5JYT7 1200 aa8.16□□□□□ -1.1
BRCA1-216ENST00000484087 ZMYM1Q5SVZ6 1142 aa8.16□□□□□ -1.1
BRCA1-216ENST00000484087 CTR9Q6PD62 1173 aa8.16□□□□□ -1.1
BRCA1-216ENST00000484087 BLOC1S2Q6QNY1 142 aa8.16□□□□□ -1.1
BRCA1-216ENST00000484087 CHMP4CQ96CF2 233 aa8.16□□□□□ -1.1
BRCA1-216ENST00000484087 INTS4Q96HW7 963 aaKnown RBP8.16□□□□□ -1.1
BRCA1-216ENST00000484087 ZSCAN31Q96LW9 406 aaPredicted RBP8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms