RNA–Protein interactions for RNA: ENST00000483851.6

SHOX2-204, Transcript of short stature homeobox 2, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SHOX2, Length 1,866 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-204ENST00000483851 UBE2Q2LH0YL09 131 aa30.29■■■□□ 2.44
SHOX2-204ENST00000483851 LETM1O95202 739 aaPredicted RBP30.29■■■□□ 2.44
SHOX2-204ENST00000483851 RPS12P25398 132 aaKnown RBP30.29■■■□□ 2.44
SHOX2-204ENST00000483851 TATDN1Q6P1N9 297 aa30.29■■■□□ 2.44
SHOX2-204ENST00000483851 SH3BP5LQ7L8J4 393 aa30.29■■■□□ 2.44
SHOX2-204ENST00000483851 ZSCAN29Q8IWY8 852 aaPredicted RBP30.29■■■□□ 2.44
SHOX2-204ENST00000483851 TRIM34Q9BYJ4 488 aa30.29■■■□□ 2.44
SHOX2-204ENST00000483851 TTLL1O95922 423 aa30.28■■■□□ 2.44
SHOX2-204ENST00000483851 PFKFB3Q16875 520 aaPredicted RBP30.28■■■□□ 2.44
SHOX2-204ENST00000483851 SPDYE2Q495Y8 402 aa30.28■■■□□ 2.44
SHOX2-204ENST00000483851 CCDC183Q5T5S1 534 aa30.28■■■□□ 2.44
SHOX2-204ENST00000483851 NOSTRINQ8IVI9 506 aa30.28■■■□□ 2.44
SHOX2-204ENST00000483851 DIS3L2Q8IYB7 885 aaKnown RBP30.28■■■□□ 2.44
SHOX2-204ENST00000483851 KCNG4Q8TDN1 519 aa30.28■■■□□ 2.44
SHOX2-204ENST00000483851 SPON1Q9HCB6 807 aa30.28■■■□□ 2.44
SHOX2-204ENST00000483851 ZBTB12Q9Y330 459 aaPredicted RBP30.28■■■□□ 2.44
SHOX2-204ENST00000483851 PPP1R9BQ96SB3 815 aa30.27■■■□□ 2.44
SHOX2-204ENST00000483851 PHF20Q9BVI0 1012 aa30.27■■■□□ 2.44
SHOX2-204ENST00000483851 RBSNQ9H1K0 784 aa30.27■■■□□ 2.44
SHOX2-204ENST00000483851 ZNF70Q9UC06 446 aaPredicted RBP30.27■■■□□ 2.44
SHOX2-204ENST00000483851 SCG2P13521 617 aa30.27■■■□□ 2.44
SHOX2-204ENST00000483851 FAM151AQ8WW52 585 aa30.27■■■□□ 2.44
SHOX2-204ENST00000483851 ZBED3Q96IU2 234 aaPredicted RBP30.27■■■□□ 2.44
SHOX2-204ENST00000483851 DNAJC18Q9H819 358 aa30.27■■■□□ 2.44
SHOX2-204ENST00000483851 SH3GLB2Q9NR46 395 aa30.27■■■□□ 2.44
SHOX2-204ENST00000483851 PARP1P09874 1014 aaKnown RBP30.26■■■□□ 2.43
SHOX2-204ENST00000483851 LINC00301Q8NCQ3 95 aa30.26■■■□□ 2.43
SHOX2-204ENST00000483851 PGBD1Q96JS3 809 aa30.26■■■□□ 2.43
SHOX2-204ENST00000483851 SPZ1Q9BXG8 430 aa30.26■■■□□ 2.43
SHOX2-204ENST00000483851 HERC5Q9UII4 1024 aaKnown RBP30.26■■■□□ 2.43
SHOX2-204ENST00000483851 ANO1Q5XXA6 986 aa30.25■■■□□ 2.43
SHOX2-204ENST00000483851 SYCE3A1L190 88 aa30.25■■■□□ 2.43
SHOX2-204ENST00000483851 MYO1BO43795 1136 aa30.25■■■□□ 2.43
SHOX2-204ENST00000483851 STAG2Q8N3U4 1231 aa30.25■■■□□ 2.43
SHOX2-204ENST00000483851 BRMS1Q9HCU9 246 aa30.25■■■□□ 2.43
SHOX2-204ENST00000483851 KCNJ14Q9UNX9 436 aa30.25■■■□□ 2.43
SHOX2-204ENST00000483851 CEBPZQ03701 1054 aaKnown RBP30.24■■■□□ 2.43
SHOX2-204ENST00000483851 CERKLQ49MI3 558 aaPredicted RBP30.24■■■□□ 2.43
SHOX2-204ENST00000483851 FAM83AQ86UY5 434 aa30.24■■■□□ 2.43
SHOX2-204ENST00000483851 BTBD18B2RXH4 712 aa30.23■■■□□ 2.43
SHOX2-204ENST00000483851 SNHG28P0DPA3 235 aa30.23■■■□□ 2.43
SHOX2-204ENST00000483851 STK38Q15208 465 aa30.23■■■□□ 2.43
SHOX2-204ENST00000483851 RILPL1Q5EBL4 403 aa30.23■■■□□ 2.43
SHOX2-204ENST00000483851 KLRF2D3W0D1 207 aa30.23■■■□□ 2.43
SHOX2-204ENST00000483851 ZNF280AP59817 542 aaPredicted RBP30.23■■■□□ 2.43
SHOX2-204ENST00000483851 ASPRV1Q53RT3 343 aa30.23■■■□□ 2.43
SHOX2-204ENST00000483851 FTOQ9C0B1 505 aaKnown RBP eCLIP30.23■■■□□ 2.43
SHOX2-204ENST00000483851 KANSL2Q9H9L4 492 aa30.23■■■□□ 2.43
SHOX2-204ENST00000483851 VPS54Q9P1Q0 977 aa30.23■■■□□ 2.43
SHOX2-204ENST00000483851 FZD9O00144 591 aa30.22■■■□□ 2.43
SHOX2-204ENST00000483851 KRT2P35908 639 aa30.22■■■□□ 2.43
SHOX2-204ENST00000483851 CCDC173Q0VFZ6 552 aa30.22■■■□□ 2.43
SHOX2-204ENST00000483851 RRAGDQ9NQL2 400 aaPredicted RBP30.22■■■□□ 2.43
SHOX2-204ENST00000483851 SLC39A14Q15043 492 aa30.21■■■□□ 2.43
SHOX2-204ENST00000483851 TMEM179Q6ZVK1 233 aa30.21■■■□□ 2.43
SHOX2-204ENST00000483851 NLGN2Q8NFZ4 835 aa30.21■■■□□ 2.43
SHOX2-204ENST00000483851 DPF2Q92785 391 aa30.21■■■□□ 2.43
SHOX2-204ENST00000483851 MKL1Q969V6 931 aa30.21■■■□□ 2.43
SHOX2-204ENST00000483851 CSRNP1Q96S65 589 aa30.21■■■□□ 2.43
SHOX2-204ENST00000483851 DDX19AQ9NUU7 478 aaKnown RBP30.21■■■□□ 2.43
SHOX2-204ENST00000483851 NYAP2Q9P242 653 aa30.21■■■□□ 2.43
SHOX2-204ENST00000483851 CLIC4Q9Y696 253 aa30.21■■■□□ 2.43
SHOX2-204ENST00000483851 A0A1W2PQ27 194 aa30.21■■■□□ 2.43
SHOX2-204ENST00000483851 A0A1W2PQ64 194 aa30.21■■■□□ 2.43
SHOX2-204ENST00000483851 A0A1W2PQD8 194 aa30.21■■■□□ 2.43
SHOX2-204ENST00000483851 SPTLC2O15270 562 aa30.21■■■□□ 2.43
SHOX2-204ENST00000483851 PDHBP11177 359 aa30.21■■■□□ 2.43
SHOX2-204ENST00000483851 CALML3P27482 149 aa30.21■■■□□ 2.43
SHOX2-204ENST00000483851 EIF6P56537 245 aaKnown RBP30.21■■■□□ 2.43
SHOX2-204ENST00000483851 ADALQ6DHV7 355 aa30.21■■■□□ 2.43
SHOX2-204ENST00000483851 BICD2Q8TD16 824 aa30.21■■■□□ 2.43
SHOX2-204ENST00000483851 CLIP2Q9UDT6 1046 aa30.21■■■□□ 2.43
SHOX2-204ENST00000483851 MPHOSPH10O00566 681 aaKnown RBP30.2■■■□□ 2.42
SHOX2-204ENST00000483851 SF3A1Q15459 793 aaKnown RBP30.2■■■□□ 2.42
SHOX2-204ENST00000483851 JMYQ8N9B5 988 aa30.2■■■□□ 2.42
SHOX2-204ENST00000483851 MYOZ2Q9NPC6 264 aa30.2■■■□□ 2.42
SHOX2-204ENST00000483851 PPP6R2O75170 966 aa30.19■■■□□ 2.42
SHOX2-204ENST00000483851 ME1P48163 572 aa30.19■■■□□ 2.42
SHOX2-204ENST00000483851 TCP10L2B9ZVM9 353 aa30.19■■■□□ 2.42
SHOX2-204ENST00000483851 GALNT17Q6IS24 598 aa30.19■■■□□ 2.42
SHOX2-204ENST00000483851 SHISA4Q96DD7 197 aa30.19■■■□□ 2.42
SHOX2-204ENST00000483851 EIF4ENIF1Q9NRA8 985 aaKnown RBP30.19■■■□□ 2.42
SHOX2-204ENST00000483851 SYNPO2Q9UMS6 1093 aa30.19■■■□□ 2.42
SHOX2-204ENST00000483851 MYH4Q9Y623 1939 aa30.19■■■□□ 2.42
SHOX2-204ENST00000483851 hCG_1642624A0A1W2PR95 340 aa30.18■■■□□ 2.42
SHOX2-204ENST00000483851 CLRN2A0PK11 232 aa30.18■■■□□ 2.42
SHOX2-204ENST00000483851 CYTH3O43739 400 aa30.18■■■□□ 2.42
SHOX2-204ENST00000483851 CCDC148Q8NFR7 591 aa30.18■■■□□ 2.42
SHOX2-204ENST00000483851 MORC2Q9Y6X9 1032 aaPredicted RBP30.18■■■□□ 2.42
SHOX2-204ENST00000483851 CNTNAP1P78357 1384 aa30.18■■■□□ 2.42
SHOX2-204ENST00000483851 WNT10BO00744 389 aa30.17■■■□□ 2.42
SHOX2-204ENST00000483851 TBC1D12O60347 775 aa30.17■■■□□ 2.42
SHOX2-204ENST00000483851 PCDHA7Q9UN72 937 aa30.17■■■□□ 2.42
SHOX2-204ENST00000483851 LIG1P18858 919 aa30.16■■■□□ 2.42
SHOX2-204ENST00000483851 RASSF7Q02833 373 aa30.16■■■□□ 2.42
SHOX2-204ENST00000483851 ABCB5Q2M3G0 1257 aa30.16■■■□□ 2.42
SHOX2-204ENST00000483851 GPATCH4Q5T3I0 446 aaKnown RBP30.16■■■□□ 2.42
SHOX2-204ENST00000483851 USP17L2Q6R6M4 530 aa30.16■■■□□ 2.42
SHOX2-204ENST00000483851 RIOX1Q9H6W3 641 aa30.16■■■□□ 2.42
SHOX2-204ENST00000483851 USP17L5A8MUK1 530 aa30.16■■■□□ 2.42
Retrieved 100 of 20,778 RNA–protein pairs in 90.7 ms