RNA–Protein interactions for RNA: ENST00000481929.5

HDAC6-224, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 591 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-224ENST00000481929 SHCBP1Q8NEM2 672 aa18.31■□□□□ 0.52
HDAC6-224ENST00000481929 IL27Q8NEV9 243 aa18.31■□□□□ 0.52
HDAC6-224ENST00000481929 UHRF1Q96T88 793 aaPredicted RBP18.31■□□□□ 0.52
HDAC6-224ENST00000481929 SPATC1LQ9H0A9 340 aa18.31■□□□□ 0.52
HDAC6-224ENST00000481929 CABP5Q9NP86 173 aa18.31■□□□□ 0.52
HDAC6-224ENST00000481929 XPNPEP3Q9NQH7 507 aa18.31■□□□□ 0.52
HDAC6-224ENST00000481929 TMEM39AQ9NV64 488 aa18.31■□□□□ 0.52
HDAC6-224ENST00000481929 COBLO75128 1261 aa18.3■□□□□ 0.52
HDAC6-224ENST00000481929 RARBP10826 455 aa18.3■□□□□ 0.52
HDAC6-224ENST00000481929 ERCC3P19447 782 aa18.3■□□□□ 0.52
HDAC6-224ENST00000481929 MRPS5P82675 430 aaKnown RBP18.3■□□□□ 0.52
HDAC6-224ENST00000481929 MTX1Q13505 466 aa18.3■□□□□ 0.52
HDAC6-224ENST00000481929 ABCB5Q2M3G0 1257 aa18.3■□□□□ 0.52
HDAC6-224ENST00000481929 CERKLQ49MI3 558 aaPredicted RBP18.3■□□□□ 0.52
HDAC6-224ENST00000481929 AKNAD1Q5T1N1 836 aa18.3■□□□□ 0.52
HDAC6-224ENST00000481929 RNF180Q86T96 592 aa18.3■□□□□ 0.52
HDAC6-224ENST00000481929 API5Q9BZZ5 524 aaKnown RBP18.3■□□□□ 0.52
HDAC6-224ENST00000481929 SERPINB13Q9UIV8 391 aa18.3■□□□□ 0.52
HDAC6-224ENST00000481929 DYNLL1P63167 89 aaKnown RBP18.29■□□□□ 0.52
HDAC6-224ENST00000481929 MAP3K12Q12852 859 aa18.29■□□□□ 0.52
HDAC6-224ENST00000481929 COG2Q14746 738 aa18.29■□□□□ 0.52
HDAC6-224ENST00000481929 TTC39AQ5SRH9 613 aa18.29■□□□□ 0.52
HDAC6-224ENST00000481929 EHD4Q9H223 541 aa18.29■□□□□ 0.52
HDAC6-224ENST00000481929 HOXC10Q9NYD6 342 aa18.29■□□□□ 0.52
HDAC6-224ENST00000481929 MYO9BQ13459 2157 aa18.28■□□□□ 0.52
HDAC6-224ENST00000481929 A0A1W2PQ45 241 aaPredicted RBP18.28■□□□□ 0.52
HDAC6-224ENST00000481929 A0A1W2PQY0 241 aa18.28■□□□□ 0.52
HDAC6-224ENST00000481929 IGSF3O75054 1194 aa18.28■□□□□ 0.52
HDAC6-224ENST00000481929 GNAI3P08754 354 aa18.28■□□□□ 0.52
HDAC6-224ENST00000481929 USP5P45974 858 aa18.28■□□□□ 0.52
HDAC6-224ENST00000481929 CCDC129Q6ZRS4 1044 aa18.28■□□□□ 0.52
HDAC6-224ENST00000481929 ABRAQ8N0Z2 381 aa18.28■□□□□ 0.52
HDAC6-224ENST00000481929 MAML3Q96JK9 1138 aa18.28■□□□□ 0.52
HDAC6-224ENST00000481929 TANGO6Q9C0B7 1094 aa18.28■□□□□ 0.52
HDAC6-224ENST00000481929 PRDM12Q9H4Q4 367 aa18.28■□□□□ 0.52
HDAC6-224ENST00000481929 MROH8Q9H579 483 aa18.28■□□□□ 0.52
HDAC6-224ENST00000481929 NRBP1Q9UHY1 535 aa18.28■□□□□ 0.52
HDAC6-224ENST00000481929 NOB1Q9ULX3 412 aaKnown RBP18.28■□□□□ 0.52
HDAC6-224ENST00000481929 MYH1P12882 1939 aa18.27■□□□□ 0.52
HDAC6-224ENST00000481929 DCDC2CA8MYV0 355 aa18.27■□□□□ 0.52
HDAC6-224ENST00000481929 ANP32CO43423 234 aa18.27■□□□□ 0.52
HDAC6-224ENST00000481929 CYP2E1P05181 493 aaPredicted RBP18.27■□□□□ 0.52
HDAC6-224ENST00000481929 G3BP1Q13283 466 aaKnown RBP eCLIP18.27■□□□□ 0.528e-6■□□□□ 9
HDAC6-224ENST00000481929 PLS1Q14651 629 aa18.27■□□□□ 0.52
HDAC6-224ENST00000481929 CCDC158Q5M9N0 1113 aa18.27■□□□□ 0.52
HDAC6-224ENST00000481929 TTC6Q86TZ1 520 aa18.27■□□□□ 0.52
HDAC6-224ENST00000481929 NCAPG2Q86XI2 1143 aa18.27■□□□□ 0.52
HDAC6-224ENST00000481929 MB21D1Q8N884 522 aa18.27■□□□□ 0.52
HDAC6-224ENST00000481929 SLC44A5Q8NCS7 719 aa18.27■□□□□ 0.52
HDAC6-224ENST00000481929 PGK1P00558 417 aa18.26■□□□□ 0.51
HDAC6-224ENST00000481929 CYP7A1P22680 504 aa18.26■□□□□ 0.51
HDAC6-224ENST00000481929 FAAP100Q0VG06 881 aa18.26■□□□□ 0.51
HDAC6-224ENST00000481929 CCDC174Q6PII3 467 aa18.26■□□□□ 0.51
HDAC6-224ENST00000481929 CERS3Q8IU89 383 aa18.26■□□□□ 0.51
HDAC6-224ENST00000481929 TOX2Q96NM4 488 aa18.26■□□□□ 0.51
HDAC6-224ENST00000481929 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.26■□□□□ 0.512e-7■■■□□ 16.9
HDAC6-224ENST00000481929 PBX4Q9BYU1 374 aa18.26■□□□□ 0.51
HDAC6-224ENST00000481929 FCER1AP12319 257 aa18.25■□□□□ 0.51
HDAC6-224ENST00000481929 HOXD11P31277 338 aaPredicted RBP18.25■□□□□ 0.51
HDAC6-224ENST00000481929 ANKRD33Q7Z3H0 272 aa18.25■□□□□ 0.51
HDAC6-224ENST00000481929 A0A0G2JMZ2 1700 aa18.25■□□□□ 0.51
HDAC6-224ENST00000481929 SMCHD1A6NHR9 2005 aa18.24■□□□□ 0.51
HDAC6-224ENST00000481929 TIMP1P01033 207 aa18.24■□□□□ 0.51
HDAC6-224ENST00000481929 PBX2P40425 430 aa18.24■□□□□ 0.51
HDAC6-224ENST00000481929 PPIGQ13427 754 aaKnown RBP eCLIP18.24■□□□□ 0.511e-7■■■□□ 17.5
HDAC6-224ENST00000481929 SEPT2Q15019 361 aa18.24■□□□□ 0.51
HDAC6-224ENST00000481929 CCDC85BQ15834 202 aaPredicted RBP18.24■□□□□ 0.51
HDAC6-224ENST00000481929 MIGA1Q8NAN2 632 aa18.24■□□□□ 0.51
HDAC6-224ENST00000481929 C1QTNF1Q9BXJ1 281 aa18.24■□□□□ 0.51
HDAC6-224ENST00000481929 STARD7Q9NQZ5 370 aa18.24■□□□□ 0.51
HDAC6-224ENST00000481929 ROBO3Q96MS0 1386 aa18.24■□□□□ 0.51
HDAC6-224ENST00000481929 GRXCR1A8MXD5 290 aa18.23■□□□□ 0.51
HDAC6-224ENST00000481929 IGFBP4P22692 258 aa18.23■□□□□ 0.51
HDAC6-224ENST00000481929 GUCY1A2P33402 732 aa18.23■□□□□ 0.51
HDAC6-224ENST00000481929 SHMT1P34896 483 aa18.23■□□□□ 0.51
HDAC6-224ENST00000481929 ZAP70P43403 619 aa18.23■□□□□ 0.51
HDAC6-224ENST00000481929 SLFN5Q08AF3 891 aa18.23■□□□□ 0.51
HDAC6-224ENST00000481929 MFSD5Q6N075 450 aa18.23■□□□□ 0.51
HDAC6-224ENST00000481929 NUP133Q8WUM0 1156 aa18.23■□□□□ 0.51
HDAC6-224ENST00000481929 DBNDD2Q9BQY9 259 aa18.23■□□□□ 0.51
HDAC6-224ENST00000481929 TSEN34Q9BSV6 310 aaKnown RBP18.23■□□□□ 0.51
HDAC6-224ENST00000481929 PIH1D3Q9NQM4 214 aaKnown RBP18.23■□□□□ 0.51
HDAC6-224ENST00000481929 AKR1A1P14550 325 aa18.22■□□□□ 0.51
HDAC6-224ENST00000481929 DSG3P32926 999 aa18.22■□□□□ 0.51
HDAC6-224ENST00000481929 ADGRE1Q14246 886 aa18.22■□□□□ 0.51
HDAC6-224ENST00000481929 TMEM240Q5SV17 173 aa18.22■□□□□ 0.51
HDAC6-224ENST00000481929 TINF2Q9BSI4 451 aa18.22■□□□□ 0.51
HDAC6-224ENST00000481929 TSPYL2Q9H2G4 693 aaPredicted RBP18.22■□□□□ 0.51
HDAC6-224ENST00000481929 GPR108Q9NPR9 543 aa18.22■□□□□ 0.51
HDAC6-224ENST00000481929 MSRAQ9UJ68 235 aa18.22■□□□□ 0.51
HDAC6-224ENST00000481929 TBX21Q9UL17 535 aa18.22■□□□□ 0.51
HDAC6-224ENST00000481929 MYO5AQ9Y4I1 1855 aaKnown RBP18.22■□□□□ 0.51
HDAC6-224ENST00000481929 PLXNA1Q9UIW2 1896 aa18.21■□□□□ 0.51
HDAC6-224ENST00000481929 A0A1W2PRG0 241 aa18.21■□□□□ 0.51
HDAC6-224ENST00000481929 MPHOSPH10O00566 681 aaKnown RBP18.21■□□□□ 0.51
HDAC6-224ENST00000481929 IDH1O75874 414 aaKnown RBP18.21■□□□□ 0.51
HDAC6-224ENST00000481929 FLOT1O75955 427 aa18.21■□□□□ 0.51
HDAC6-224ENST00000481929 ACLYP53396 1101 aa18.21■□□□□ 0.51
HDAC6-224ENST00000481929 RAB30Q15771 203 aa18.21■□□□□ 0.51
HDAC6-224ENST00000481929 TNNI3KQ59H18 835 aa18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms