RNA–Protein interactions for RNA: ENST00000478644.1

HOXB3-209, Transcript of homeobox B3, humanhuman

TSL 4

Gene HOXB3, Length 398 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-209ENST00000478644 STIM2Q9P246 746 aa8.18□□□□□ -1.1
HOXB3-209ENST00000478644 HOXB7P09629 217 aa8.17□□□□□ -1.1
HOXB3-209ENST00000478644 CPB1P15086 417 aa8.17□□□□□ -1.1
HOXB3-209ENST00000478644 EIF4A1P60842 406 aaKnown RBP8.17□□□□□ -1.1
HOXB3-209ENST00000478644 RAC1P63000 192 aa8.17□□□□□ -1.1
HOXB3-209ENST00000478644 FKBP4Q02790 459 aaKnown RBP eCLIP8.17□□□□□ -1.1
HOXB3-209ENST00000478644 CALD1Q05682 793 aaKnown RBP8.17□□□□□ -1.1
HOXB3-209ENST00000478644 PRPF40BQ6NWY9 871 aaKnown RBP8.17□□□□□ -1.1
HOXB3-209ENST00000478644 PNMA8AQ86V59 439 aaPredicted RBP8.17□□□□□ -1.1
HOXB3-209ENST00000478644 FMR1NBQ8N0W7 255 aaPredicted RBP8.17□□□□□ -1.1
HOXB3-209ENST00000478644 LENG1Q96BZ8 264 aaPredicted RBP8.17□□□□□ -1.1
HOXB3-209ENST00000478644 RBM17Q96I25 401 aaKnown RBP8.17□□□□□ -1.1
HOXB3-209ENST00000478644 PSMD1Q99460 953 aa8.17□□□□□ -1.1
HOXB3-209ENST00000478644 RIC1Q4ADV7 1423 aa8.17□□□□□ -1.1
HOXB3-209ENST00000478644 SBF1O95248 1867 aa8.17□□□□□ -1.1
HOXB3-209ENST00000478644 NFKBIEO00221 500 aa8.16□□□□□ -1.1
HOXB3-209ENST00000478644 KCNQ3O43525 872 aa8.16□□□□□ -1.1
HOXB3-209ENST00000478644 MMP20O60882 483 aa8.16□□□□□ -1.1
HOXB3-209ENST00000478644 SELPP16109 830 aa8.16□□□□□ -1.1
HOXB3-209ENST00000478644 ATP2B4P23634 1241 aa8.16□□□□□ -1.1
HOXB3-209ENST00000478644 HOXA10P31260 410 aaPredicted RBP8.16□□□□□ -1.1
HOXB3-209ENST00000478644 RIPK4P57078 832 aa8.16□□□□□ -1.1
HOXB3-209ENST00000478644 PLAURQ03405 335 aa8.16□□□□□ -1.1
HOXB3-209ENST00000478644 ADGRE1Q14246 886 aa8.16□□□□□ -1.1
HOXB3-209ENST00000478644 NAA30Q147X3 362 aaPredicted RBP8.16□□□□□ -1.1
HOXB3-209ENST00000478644 TRIP4Q15650 581 aaPredicted RBP8.16□□□□□ -1.1
HOXB3-209ENST00000478644 ELMSAN1Q6PJG2 1045 aa8.16□□□□□ -1.1
HOXB3-209ENST00000478644 MAP3K15Q6ZN16 1313 aa8.16□□□□□ -1.1
HOXB3-209ENST00000478644 TMC4Q7Z404 712 aa8.16□□□□□ -1.1
HOXB3-209ENST00000478644 DNAJC5GQ8N7S2 189 aa8.16□□□□□ -1.1
HOXB3-209ENST00000478644 JMYQ8N9B5 988 aa8.16□□□□□ -1.1
HOXB3-209ENST00000478644 JDP2Q8WYK2 163 aa8.16□□□□□ -1.1
HOXB3-209ENST00000478644 PIK3R5Q8WYR1 880 aa8.16□□□□□ -1.1
HOXB3-209ENST00000478644 MKNK1Q9BUB5 465 aa8.16□□□□□ -1.1
HOXB3-209ENST00000478644 TSPYL4Q9UJ04 414 aa8.16□□□□□ -1.1
HOXB3-209ENST00000478644 BCORQ6W2J9 1755 aa8.15□□□□□ -1.1
HOXB3-209ENST00000478644 PSAPP07602 524 aa8.15□□□□□ -1.1
HOXB3-209ENST00000478644 RBM25P49756 843 aaKnown RBP8.15□□□□□ -1.1
HOXB3-209ENST00000478644 NRG1Q02297 640 aaPredicted RBP8.15□□□□□ -1.1
HOXB3-209ENST00000478644 DOC2BQ14184 412 aa8.15□□□□□ -1.1
HOXB3-209ENST00000478644 WDR43Q15061 677 aaKnown RBP eCLIP8.15□□□□□ -1.1
HOXB3-209ENST00000478644 CRY2Q49AN0 593 aa8.15□□□□□ -1.1
HOXB3-209ENST00000478644 DMRTC2Q8IXT2 367 aaPredicted RBP8.15□□□□□ -1.1
HOXB3-209ENST00000478644 SUPT20HQ8NEM7 779 aa8.15□□□□□ -1.1
HOXB3-209ENST00000478644 RPGRQ92834 1020 aaKnown RBP8.15□□□□□ -1.1
HOXB3-209ENST00000478644 RUNDC1Q96C34 613 aa8.15□□□□□ -1.1
HOXB3-209ENST00000478644 CRAMP1Q96RY5 1269 aa8.15□□□□□ -1.1
HOXB3-209ENST00000478644 WDR90Q96KV7 1748 aa8.15□□□□□ -1.11
HOXB3-209ENST00000478644 ANP32CO43423 234 aa8.14□□□□□ -1.11
HOXB3-209ENST00000478644 BBOX1O75936 387 aa8.14□□□□□ -1.11
HOXB3-209ENST00000478644 ZAP70P43403 619 aa8.14□□□□□ -1.11
HOXB3-209ENST00000478644 DCTN1Q14203 1278 aa8.14□□□□□ -1.11
HOXB3-209ENST00000478644 NKAPLQ5M9Q1 402 aa8.14□□□□□ -1.11
HOXB3-209ENST00000478644 SLC10A5Q5PT55 438 aa8.14□□□□□ -1.11
HOXB3-209ENST00000478644 FBXO11Q86XK2 927 aa8.14□□□□□ -1.11
HOXB3-209ENST00000478644 ZNF34Q8IZ26 560 aa8.14□□□□□ -1.11
HOXB3-209ENST00000478644 RRP7AQ9Y3A4 280 aaKnown RBP8.14□□□□□ -1.11
HOXB3-209ENST00000478644 ARFGEF2Q9Y6D5 1785 aa8.14□□□□□ -1.11
HOXB3-209ENST00000478644 DICER1Q9UPY3 1922 aaKnown RBP8.13□□□□□ -1.11
HOXB3-209ENST00000478644 FER1L6Q2WGJ9 1857 aa8.13□□□□□ -1.11
HOXB3-209ENST00000478644 LAMB4A4D0S4 1761 aa8.13□□□□□ -1.11
HOXB3-209ENST00000478644 TMEM88BA6NKF7 163 aa8.13□□□□□ -1.11
HOXB3-209ENST00000478644 ZBTB39O15060 712 aa8.13□□□□□ -1.11
HOXB3-209ENST00000478644 CDK11BP21127 795 aaKnown RBP8.13□□□□□ -1.11
HOXB3-209ENST00000478644 ITGB7P26010 798 aa8.13□□□□□ -1.11
HOXB3-209ENST00000478644 TMPOP42166 694 aaKnown RBP8.13□□□□□ -1.11
HOXB3-209ENST00000478644 EIF6P56537 245 aaKnown RBP8.13□□□□□ -1.11
HOXB3-209ENST00000478644 MLLT1Q03111 559 aaPredicted RBP8.13□□□□□ -1.11
HOXB3-209ENST00000478644 RSPO4Q2I0M5 234 aaPredicted RBP8.13□□□□□ -1.11
HOXB3-209ENST00000478644 LDHDQ86WU2 507 aa8.13□□□□□ -1.11
HOXB3-209ENST00000478644 GPC2Q8N158 579 aa8.13□□□□□ -1.11
HOXB3-209ENST00000478644 OR13H1Q8NG92 308 aa8.13□□□□□ -1.11
HOXB3-209ENST00000478644 UTP14AQ9BVJ6 771 aaKnown RBP8.13□□□□□ -1.11
HOXB3-209ENST00000478644 SMG9Q9H0W8 520 aaKnown RBP8.13□□□□□ -1.11
HOXB3-209ENST00000478644 FNDC3AQ9Y2H6 1198 aaKnown RBP8.13□□□□□ -1.11
HOXB3-209ENST00000478644 KDM3BQ7LBC6 1761 aa8.12□□□□□ -1.11
HOXB3-209ENST00000478644 PRAMEF22A3QJZ6 481 aa8.12□□□□□ -1.11
HOXB3-209ENST00000478644 FZD9O00144 591 aa8.12□□□□□ -1.11
HOXB3-209ENST00000478644 CHL1O00533 1208 aa8.12□□□□□ -1.11
HOXB3-209ENST00000478644 IARSP41252 1262 aaKnown RBP8.12□□□□□ -1.11
HOXB3-209ENST00000478644 MBTPS1Q14703 1052 aa8.12□□□□□ -1.11
HOXB3-209ENST00000478644 GZF1Q9H116 711 aaPredicted RBP8.12□□□□□ -1.11
HOXB3-209ENST00000478644 DDX21Q9NR30 783 aaKnown RBP eCLIP8.12□□□□□ -1.11
HOXB3-209ENST00000478644 TPSG1Q9NRR2 321 aa8.12□□□□□ -1.11
HOXB3-209ENST00000478644 MIS18AQ9NYP9 233 aa8.12□□□□□ -1.11
HOXB3-209ENST00000478644 DBF4Q9UBU7 674 aaPredicted RBP8.12□□□□□ -1.11
HOXB3-209ENST00000478644 SEPT3Q9UH03 358 aa8.12□□□□□ -1.11
HOXB3-209ENST00000478644 HACL1Q9UJ83 578 aa8.12□□□□□ -1.11
HOXB3-209ENST00000478644 CEP350Q5VT06 3117 aa8.12□□□□□ -1.11
HOXB3-209ENST00000478644 ANKRD31Q8N7Z5 1873 aa8.11□□□□□ -1.11
HOXB3-209ENST00000478644 SCN4AP35499 1836 aa8.11□□□□□ -1.11
HOXB3-209ENST00000478644 MYL6BP14649 208 aa8.11□□□□□ -1.11
HOXB3-209ENST00000478644 HLFQ16534 295 aa8.11□□□□□ -1.11
HOXB3-209ENST00000478644 HFE2Q6ZVN8 426 aa8.11□□□□□ -1.11
HOXB3-209ENST00000478644 WFDC8Q8IUA0 241 aa8.11□□□□□ -1.11
HOXB3-209ENST00000478644 CACTIN-AS1Q8N1I8 211 aa8.11□□□□□ -1.11
HOXB3-209ENST00000478644 SYNE4Q8N205 404 aa8.11□□□□□ -1.11
HOXB3-209ENST00000478644 RETREG2Q8NC44 543 aa8.11□□□□□ -1.11
HOXB3-209ENST00000478644 FOXD4L4Q8WXT5 416 aaPredicted RBP8.11□□□□□ -1.11
HOXB3-209ENST00000478644 PLD4Q96BZ4 506 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms