RNA–Protein interactions for RNA: ENST00000478459.5

EPHB4-205, Transcript of EPH receptor B4, humanhuman

TSL 2

Gene EPHB4, Length 965 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4-205ENST00000478459 GPR142Q7Z601 462 aa22.81■■□□□ 1.24
EPHB4-205ENST00000478459 DEFB118Q96PH6 123 aa22.81■■□□□ 1.24
EPHB4-205ENST00000478459 MKNK2Q9HBH9 465 aa22.81■■□□□ 1.24
EPHB4-205ENST00000478459 COL11A1P12107 1806 aaPredicted RBP22.8■■□□□ 1.24
EPHB4-205ENST00000478459 RASA1P20936 1047 aa22.8■■□□□ 1.24
EPHB4-205ENST00000478459 CCL14Q16627 93 aa22.8■■□□□ 1.24
EPHB4-205ENST00000478459 ZMYM1Q5SVZ6 1142 aa22.8■■□□□ 1.24
EPHB4-205ENST00000478459 IFNL3Q8IZI9 196 aa22.8■■□□□ 1.24
EPHB4-205ENST00000478459 PXYLP1Q8TE99 480 aa22.8■■□□□ 1.24
EPHB4-205ENST00000478459 U2AF1L4Q8WU68 220 aaKnown RBP22.8■■□□□ 1.24
EPHB4-205ENST00000478459 TRIB2Q92519 343 aa22.8■■□□□ 1.24
EPHB4-205ENST00000478459 CHMP4CQ96CF2 233 aa22.8■■□□□ 1.24
EPHB4-205ENST00000478459 CCDC17Q96LX7 622 aa22.8■■□□□ 1.24
EPHB4-205ENST00000478459 RABGAP1Q9Y3P9 1069 aa22.8■■□□□ 1.24
EPHB4-205ENST00000478459 MYH4Q9Y623 1939 aa22.79■■□□□ 1.24
EPHB4-205ENST00000478459 PATL2C9JE40 543 aaKnown RBP22.79■■□□□ 1.24
EPHB4-205ENST00000478459 GJB1P08034 283 aa22.79■■□□□ 1.24
EPHB4-205ENST00000478459 SBK1Q52WX2 424 aa22.79■■□□□ 1.24
EPHB4-205ENST00000478459 PLEKHH3Q7Z736 793 aa22.79■■□□□ 1.24
EPHB4-205ENST00000478459 NUDT12Q9BQG2 462 aa22.79■■□□□ 1.24
EPHB4-205ENST00000478459 GNL3Q9BVP2 549 aaKnown RBP eCLIP22.79■■□□□ 1.24
EPHB4-205ENST00000478459 RWDD1Q9H446 243 aaPredicted RBP22.79■■□□□ 1.24
EPHB4-205ENST00000478459 PARP14Q460N5 1801 aa22.79■■□□□ 1.24
EPHB4-205ENST00000478459 TRIM6-TRIM34B2RNG4 842 aa22.78■■□□□ 1.24
EPHB4-205ENST00000478459 FLOT1O75955 427 aa22.78■■□□□ 1.24
EPHB4-205ENST00000478459 TFRCP02786 760 aaKnown RBP22.78■■□□□ 1.24
EPHB4-205ENST00000478459 MAPK4P31152 587 aa22.78■■□□□ 1.24
EPHB4-205ENST00000478459 GJA8P48165 433 aa22.78■■□□□ 1.24
EPHB4-205ENST00000478459 PLS1Q14651 629 aa22.78■■□□□ 1.24
EPHB4-205ENST00000478459 LRRFIP1Q32MZ4 808 aaKnown RBP22.78■■□□□ 1.24
EPHB4-205ENST00000478459 PRPF38BQ5VTL8 546 aaKnown RBP22.78■■□□□ 1.24
EPHB4-205ENST00000478459 NUP88Q99567 741 aaPredicted RBP22.78■■□□□ 1.24
EPHB4-205ENST00000478459 VCPKMTQ9H867 229 aa22.78■■□□□ 1.24
EPHB4-205ENST00000478459 FBXO28Q9NVF7 368 aa22.78■■□□□ 1.24
EPHB4-205ENST00000478459 TMX2Q9Y320 296 aa22.78■■□□□ 1.24
EPHB4-205ENST00000478459 GREB1LQ9C091 1923 aaPredicted RBP22.78■■□□□ 1.24
EPHB4-205ENST00000478459 HMGCRP04035 888 aa22.77■■□□□ 1.24
EPHB4-205ENST00000478459 GNAT2P19087 354 aa22.77■■□□□ 1.24
EPHB4-205ENST00000478459 COG2Q14746 738 aa22.77■■□□□ 1.24
EPHB4-205ENST00000478459 GTF3C2Q8WUA4 911 aaPredicted RBP22.77■■□□□ 1.24
EPHB4-205ENST00000478459 RILPL2Q969X0 211 aa22.77■■□□□ 1.24
EPHB4-205ENST00000478459 ATG4CQ96DT6 458 aa22.77■■□□□ 1.24
EPHB4-205ENST00000478459 NAPBQ9H115 298 aa22.77■■□□□ 1.24
EPHB4-205ENST00000478459 INCENPQ9NQS7 918 aa22.77■■□□□ 1.24
EPHB4-205ENST00000478459 STAP2Q9UGK3 403 aa22.77■■□□□ 1.24
EPHB4-205ENST00000478459 CTDSPL2Q05D32 466 aa22.76■■□□□ 1.23
EPHB4-205ENST00000478459 FAM47AQ5JRC9 791 aa22.76■■□□□ 1.23
EPHB4-205ENST00000478459 VPS53Q5VIR6 699 aa22.76■■□□□ 1.23
EPHB4-205ENST00000478459 FAM227BQ96M60 508 aa22.76■■□□□ 1.23
EPHB4-205ENST00000478459 XRN2Q9H0D6 950 aaKnown RBP eCLIP22.76■■□□□ 1.23
EPHB4-205ENST00000478459 SH2D4AQ9H788 454 aa22.76■■□□□ 1.23
EPHB4-205ENST00000478459 KANSL2Q9H9L4 492 aa22.76■■□□□ 1.23
EPHB4-205ENST00000478459 A0A0G2JMZ2 1700 aa22.75■■□□□ 1.23
EPHB4-205ENST00000478459 SGPL1O95470 568 aa22.75■■□□□ 1.23
EPHB4-205ENST00000478459 CCNA1P78396 465 aa22.75■■□□□ 1.23
EPHB4-205ENST00000478459 FAM83BQ5T0W9 1011 aa22.75■■□□□ 1.23
EPHB4-205ENST00000478459 GIMAP6Q6P9H5 292 aa22.75■■□□□ 1.23
EPHB4-205ENST00000478459 ZNF444Q8N0Y2 327 aaPredicted RBP22.75■■□□□ 1.23
EPHB4-205ENST00000478459 EVI5LQ96CN4 794 aa22.75■■□□□ 1.23
EPHB4-205ENST00000478459 A0A0D9SFI3 127 aa22.74■■□□□ 1.23
EPHB4-205ENST00000478459 FOXP2O15409 715 aa22.74■■□□□ 1.23
EPHB4-205ENST00000478459 PRKAR2AP13861 404 aaKnown RBP22.74■■□□□ 1.23
EPHB4-205ENST00000478459 ZKSCAN1P17029 563 aaPredicted RBP22.74■■□□□ 1.23
EPHB4-205ENST00000478459 MORN1Q5T089 497 aa22.74■■□□□ 1.23
EPHB4-205ENST00000478459 SMC5Q8IY18 1101 aa22.74■■□□□ 1.23
EPHB4-205ENST00000478459 NKX2-3Q8TAU0 364 aa22.74■■□□□ 1.23
EPHB4-205ENST00000478459 SOCS4Q8WXH5 440 aa22.74■■□□□ 1.23
EPHB4-205ENST00000478459 MOV10L1Q9BXT6 1211 aaKnown RBP22.74■■□□□ 1.23
EPHB4-205ENST00000478459 NACAP1Q9BZK3 213 aa22.74■■□□□ 1.23
EPHB4-205ENST00000478459 CLIP2Q9UDT6 1046 aa22.74■■□□□ 1.23
EPHB4-205ENST00000478459 ROBO3Q96MS0 1386 aa22.74■■□□□ 1.23
EPHB4-205ENST00000478459 FARP2O94887 1054 aaPredicted RBP22.73■■□□□ 1.23
EPHB4-205ENST00000478459 DSG3P32926 999 aa22.73■■□□□ 1.23
EPHB4-205ENST00000478459 RGS2P41220 211 aa22.73■■□□□ 1.23
EPHB4-205ENST00000478459 PPARAQ07869 468 aa22.73■■□□□ 1.23
EPHB4-205ENST00000478459 LBX2Q6XYB7 198 aa22.73■■□□□ 1.23
EPHB4-205ENST00000478459 CHD1LQ86WJ1 897 aa22.73■■□□□ 1.23
EPHB4-205ENST00000478459 LRRC47Q8N1G4 583 aaKnown RBP22.73■■□□□ 1.23
EPHB4-205ENST00000478459 LPAR1Q92633 364 aa22.73■■□□□ 1.23
EPHB4-205ENST00000478459 DPF3Q92784 378 aa22.73■■□□□ 1.23
EPHB4-205ENST00000478459 GOPCQ9HD26 462 aa22.73■■□□□ 1.23
EPHB4-205ENST00000478459 HMX1Q9NP08 348 aaPredicted RBP22.73■■□□□ 1.23
EPHB4-205ENST00000478459 HOXC10Q9NYD6 342 aa22.73■■□□□ 1.23
EPHB4-205ENST00000478459 WDR46O15213 610 aaKnown RBP22.72■■□□□ 1.23
EPHB4-205ENST00000478459 PTPREP23469 700 aa22.72■■□□□ 1.23
EPHB4-205ENST00000478459 SLC4A3P48751 1232 aa22.72■■□□□ 1.23
EPHB4-205ENST00000478459 NMIQ13287 307 aaPredicted RBP22.72■■□□□ 1.23
EPHB4-205ENST00000478459 NCAPG2Q86XI2 1143 aa22.72■■□□□ 1.23
EPHB4-205ENST00000478459 DIS3LQ8TF46 1054 aaKnown RBP22.72■■□□□ 1.23
EPHB4-205ENST00000478459 USP6NLQ92738 828 aa22.72■■□□□ 1.23
EPHB4-205ENST00000478459 SPATC1LQ9H0A9 340 aa22.72■■□□□ 1.23
EPHB4-205ENST00000478459 PAK6Q9NQU5 681 aaPredicted RBP22.72■■□□□ 1.23
EPHB4-205ENST00000478459 FLRT1Q9NZU1 646 aa22.72■■□□□ 1.23
EPHB4-205ENST00000478459 IVNS1ABPQ9Y6Y0 642 aa22.72■■□□□ 1.23
EPHB4-205ENST00000478459 CCND3P30281 292 aaPredicted RBP22.71■■□□□ 1.23
EPHB4-205ENST00000478459 NUCB1Q02818 461 aa22.71■■□□□ 1.23
EPHB4-205ENST00000478459 CACNB2Q08289 660 aaPredicted RBP22.71■■□□□ 1.23
EPHB4-205ENST00000478459 MAP2K5Q13163 448 aa22.71■■□□□ 1.23
EPHB4-205ENST00000478459 NPLOC4Q8TAT6 608 aa22.71■■□□□ 1.23
EPHB4-205ENST00000478459 CEP95Q96GE4 821 aa22.71■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms