RNA–Protein interactions for RNA: ENST00000477102.1

SH3KBP1-208, Transcript of SH3 domain containing kinase binding protein 1, human

TSL 5

Gene SH3KBP1, Length 589 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SH3KBP1-208	ENST00000477102	FLT3LG	P49771	235 aa		13.6	□□□□□ -0.23
SH3KBP1-208	ENST00000477102	MNX1	P50219	401 aa	Predicted RBP	13.6	□□□□□ -0.23
SH3KBP1-208	ENST00000477102	ICA1	Q05084	483 aa		13.6	□□□□□ -0.23
SH3KBP1-208	ENST00000477102	USP17L24	Q0WX57	530 aa		13.6	□□□□□ -0.23
SH3KBP1-208	ENST00000477102	NMI	Q13287	307 aa	Predicted RBP	13.6	□□□□□ -0.23
SH3KBP1-208	ENST00000477102	SLC9C1	Q4G0N8	1177 aa		13.6	□□□□□ -0.23
SH3KBP1-208	ENST00000477102	RPAP3	Q9H6T3	665 aa	Predicted RBP	13.6	□□□□□ -0.23
SH3KBP1-208	ENST00000477102	RBM27	Q9P2N5	1060 aa	Known RBP	13.6	□□□□□ -0.23
SH3KBP1-208	ENST00000477102	IGKV6D-41	A0A0C4DH26	115 aa		13.59	□□□□□ -0.23
SH3KBP1-208	ENST00000477102	TRIM6-TRIM34	B2RNG4	842 aa		13.59	□□□□□ -0.23
SH3KBP1-208	ENST00000477102	EEF2	P13639	858 aa	Known RBP	13.59	□□□□□ -0.23
SH3KBP1-208	ENST00000477102	HOXD10	P28358	340 aa		13.59	□□□□□ -0.23
SH3KBP1-208	ENST00000477102	MTFR1	Q15390	333 aa		13.59	□□□□□ -0.23
SH3KBP1-208	ENST00000477102	ZNF589	Q86UQ0	364 aa	Predicted RBP	13.59	□□□□□ -0.23
SH3KBP1-208	ENST00000477102	RAET1E	Q8TD07	263 aa		13.59	□□□□□ -0.23
SH3KBP1-208	ENST00000477102	RILPL2	Q969X0	211 aa		13.59	□□□□□ -0.23
SH3KBP1-208	ENST00000477102	INCENP	Q9NQS7	918 aa		13.59	□□□□□ -0.23
SH3KBP1-208	ENST00000477102	HELLS	Q9NRZ9	838 aa		13.59	□□□□□ -0.23
SH3KBP1-208	ENST00000477102	BTBD7	Q9P203	1132 aa		13.59	□□□□□ -0.23
SH3KBP1-208	ENST00000477102	GJD2	Q9UKL4	321 aa		13.59	□□□□□ -0.23
SH3KBP1-208	ENST00000477102	RANBP2	P49792	3224 aa	Known RBP	13.58	□□□□□ -0.23
SH3KBP1-208	ENST00000477102	PARP14	Q460N5	1801 aa		13.58	□□□□□ -0.24
SH3KBP1-208	ENST00000477102	SPDYE16	A6NNV3	312 aa	Predicted RBP	13.58	□□□□□ -0.24
SH3KBP1-208	ENST00000477102	MYC	P01106	439 aa	Predicted RBP	13.58	□□□□□ -0.24
SH3KBP1-208	ENST00000477102	SDS	P20132	328 aa		13.58	□□□□□ -0.24
SH3KBP1-208	ENST00000477102	GRK4	P32298	578 aa		13.58	□□□□□ -0.24
SH3KBP1-208	ENST00000477102	ERVK-9	P63128	1117 aa		13.58	□□□□□ -0.24
SH3KBP1-208	ENST00000477102	ERVK-24	P63145	666 aa		13.58	□□□□□ -0.24
SH3KBP1-208	ENST00000477102	PPARA	Q07869	468 aa		13.58	□□□□□ -0.24
SH3KBP1-208	ENST00000477102	IRF5	Q13568	498 aa		13.58	□□□□□ -0.24
SH3KBP1-208	ENST00000477102	MCMDC2	Q4G0Z9	681 aa		13.58	□□□□□ -0.24
SH3KBP1-208	ENST00000477102	LBX2	Q6XYB7	198 aa		13.58	□□□□□ -0.24
SH3KBP1-208	ENST00000477102	NBPF11	Q86T75	865 aa		13.58	□□□□□ -0.24
SH3KBP1-208	ENST00000477102	SPICE1	Q8N0Z3	855 aa		13.58	□□□□□ -0.24
SH3KBP1-208	ENST00000477102	GPRC5A	Q8NFJ5	357 aa		13.58	□□□□□ -0.24
SH3KBP1-208	ENST00000477102	PAGR1	Q9BTK6	254 aa		13.58	□□□□□ -0.24
SH3KBP1-208	ENST00000477102	NAPB	Q9H115	298 aa		13.58	□□□□□ -0.24
SH3KBP1-208	ENST00000477102	PORCN	Q9H237	461 aa		13.58	□□□□□ -0.24
SH3KBP1-208	ENST00000477102	VCPKMT	Q9H867	229 aa		13.58	□□□□□ -0.24
SH3KBP1-208	ENST00000477102	KANSL2	Q9H9L4	492 aa		13.58	□□□□□ -0.24
SH3KBP1-208	ENST00000477102		A0A0G2JMZ2	1700 aa		13.58	□□□□□ -0.24
SH3KBP1-208	ENST00000477102	ELN	P15502	786 aa		13.57	□□□□□ -0.24
SH3KBP1-208	ENST00000477102	CTDSPL2	Q05D32	466 aa		13.57	□□□□□ -0.24
SH3KBP1-208	ENST00000477102	TICAM2	Q86XR7	235 aa		13.57	□□□□□ -0.24
SH3KBP1-208	ENST00000477102	NACAP1	Q9BZK3	213 aa		13.57	□□□□□ -0.24
SH3KBP1-208	ENST00000477102	MKNK2	Q9HBH9	465 aa		13.57	□□□□□ -0.24
SH3KBP1-208	ENST00000477102	ARHGEF10L	Q9HCE6	1279 aa		13.57	□□□□□ -0.24
SH3KBP1-208	ENST00000477102	DDX52	Q9Y2R4	599 aa	Known RBP eCLIP	13.57	□□□□□ -0.24
SH3KBP1-208	ENST00000477102	ADCY3	O60266	1144 aa		13.56	□□□□□ -0.24
SH3KBP1-208	ENST00000477102	GSPT1	P15170	499 aa	Known RBP	13.56	□□□□□ -0.24
SH3KBP1-208	ENST00000477102	ATP2B2	Q01814	1243 aa		13.56	□□□□□ -0.24
SH3KBP1-208	ENST00000477102	ALX1	Q15699	326 aa		13.56	□□□□□ -0.24
SH3KBP1-208	ENST00000477102	LPAR1	Q92633	364 aa		13.56	□□□□□ -0.24
SH3KBP1-208	ENST00000477102	COA7	Q96BR5	231 aa		13.56	□□□□□ -0.24
SH3KBP1-208	ENST00000477102	RABGAP1	Q9Y3P9	1069 aa		13.56	□□□□□ -0.24
SH3KBP1-208	ENST00000477102	FGA	P02671	866 aa		13.55	□□□□□ -0.24
SH3KBP1-208	ENST00000477102	HSPD1	P10809	573 aa	Known RBP	13.55	□□□□□ -0.24
SH3KBP1-208	ENST00000477102	DSG3	P32926	999 aa		13.55	□□□□□ -0.24
SH3KBP1-208	ENST00000477102	COG2	Q14746	738 aa		13.55	□□□□□ -0.24
SH3KBP1-208	ENST00000477102	FAM47A	Q5JRC9	791 aa		13.55	□□□□□ -0.24
SH3KBP1-208	ENST00000477102	SLAIN1	Q8ND83	568 aa		13.55	□□□□□ -0.24
SH3KBP1-208	ENST00000477102	NEDD1	Q8NHV4	660 aa		13.55	□□□□□ -0.24
SH3KBP1-208	ENST00000477102	NKX2-3	Q8TAU0	364 aa		13.55	□□□□□ -0.24
SH3KBP1-208	ENST00000477102	PXYLP1	Q8TE99	480 aa		13.55	□□□□□ -0.24
SH3KBP1-208	ENST00000477102	GTF3C2	Q8WUA4	911 aa	Predicted RBP	13.55	□□□□□ -0.24
SH3KBP1-208	ENST00000477102	USP6NL	Q92738	828 aa		13.55	□□□□□ -0.24
SH3KBP1-208	ENST00000477102	CEP95	Q96GE4	821 aa		13.55	□□□□□ -0.24
SH3KBP1-208	ENST00000477102	TANGO6	Q9C0B7	1094 aa		13.55	□□□□□ -0.24
SH3KBP1-208	ENST00000477102	IL25	Q9H293	177 aa		13.55	□□□□□ -0.24
SH3KBP1-208	ENST00000477102	FBXO28	Q9NVF7	368 aa		13.55	□□□□□ -0.24
SH3KBP1-208	ENST00000477102	NYAP2	Q9P242	653 aa		13.55	□□□□□ -0.24
SH3KBP1-208	ENST00000477102	ANAPC4	Q9UJX5	808 aa		13.55	□□□□□ -0.24
SH3KBP1-208	ENST00000477102	COL6A3	P12111	3177 aa		13.55	□□□□□ -0.24
SH3KBP1-208	ENST00000477102	PLIN4	Q96Q06	1357 aa		13.55	□□□□□ -0.24
SH3KBP1-208	ENST00000477102	WDR46	O15213	610 aa	Known RBP	13.54	□□□□□ -0.24
SH3KBP1-208	ENST00000477102	TFAP4	Q01664	338 aa		13.54	□□□□□ -0.24
SH3KBP1-208	ENST00000477102	TRIM32	Q13049	653 aa		13.54	□□□□□ -0.24
SH3KBP1-208	ENST00000477102	TTC22	Q5TAA0	569 aa		13.54	□□□□□ -0.24
SH3KBP1-208	ENST00000477102	GPR142	Q7Z601	462 aa		13.54	□□□□□ -0.24
SH3KBP1-208	ENST00000477102	ZNF444	Q8N0Y2	327 aa	Predicted RBP	13.54	□□□□□ -0.24
SH3KBP1-208	ENST00000477102	DPF3	Q92784	378 aa		13.54	□□□□□ -0.24
SH3KBP1-208	ENST00000477102	MKL1	Q969V6	931 aa		13.54	□□□□□ -0.24
SH3KBP1-208	ENST00000477102	SHISA4	Q96DD7	197 aa		13.54	□□□□□ -0.24
SH3KBP1-208	ENST00000477102	ATG4C	Q96DT6	458 aa		13.54	□□□□□ -0.24
SH3KBP1-208	ENST00000477102	NUP88	Q99567	741 aa	Predicted RBP	13.54	□□□□□ -0.24
SH3KBP1-208	ENST00000477102	NBPF3	Q9H094	633 aa		13.54	□□□□□ -0.24
SH3KBP1-208	ENST00000477102	UNC93B1	Q9H1C4	597 aa		13.54	□□□□□ -0.24
SH3KBP1-208	ENST00000477102	SH2D4A	Q9H788	454 aa		13.54	□□□□□ -0.24
SH3KBP1-208	ENST00000477102	MTMR4	Q9NYA4	1195 aa		13.54	□□□□□ -0.24
SH3KBP1-208	ENST00000477102	CLIP2	Q9UDT6	1046 aa		13.54	□□□□□ -0.24
SH3KBP1-208	ENST00000477102	CCDC171	Q6TFL3	1326 aa		13.54	□□□□□ -0.24
SH3KBP1-208	ENST00000477102	MYH4	Q9Y623	1939 aa		13.53	□□□□□ -0.24
SH3KBP1-208	ENST00000477102		F5H6K3	240 aa		13.53	□□□□□ -0.24
SH3KBP1-208	ENST00000477102	NDUFB10	O96000	172 aa		13.53	□□□□□ -0.24
SH3KBP1-208	ENST00000477102	INHA	P05111	366 aa		13.53	□□□□□ -0.24
SH3KBP1-208	ENST00000477102	FGR	P09769	529 aa		13.53	□□□□□ -0.24
SH3KBP1-208	ENST00000477102	CCL5	P13501	91 aa		13.53	□□□□□ -0.24
SH3KBP1-208	ENST00000477102	MAPK4	P31152	587 aa		13.53	□□□□□ -0.24
SH3KBP1-208	ENST00000477102	PDE4B	Q07343	736 aa		13.53	□□□□□ -0.24
SH3KBP1-208	ENST00000477102	KLRC3	Q07444	240 aa		13.53	□□□□□ -0.24

Retrieved 100 of 20,778 RNA–protein pairs in 41 ms