RNA–Protein interactions for RNA: ENST00000475491.1

KCNIP3-206, Transcript of potassium voltage-gated channel interacting protein 3, humanhuman

TSL 1 (best)

Gene KCNIP3, Length 3,658 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3-206ENST00000475491 SAMD7Q7Z3H4 446 aa13.12□□□□□ -0.31
KCNIP3-206ENST00000475491 CREBRFQ8IUR6 639 aa13.12□□□□□ -0.31
KCNIP3-206ENST00000475491 DYNC1I1O14576 645 aa13.12□□□□□ -0.31
KCNIP3-206ENST00000475491 LIFRP42702 1097 aa13.12□□□□□ -0.31
KCNIP3-206ENST00000475491 NDUFA8P51970 172 aa13.12□□□□□ -0.31
KCNIP3-206ENST00000475491 DGKZQ13574 1117 aa13.12□□□□□ -0.31
KCNIP3-206ENST00000475491 TBC1D10BQ4KMP7 808 aaPredicted RBP13.12□□□□□ -0.31
KCNIP3-206ENST00000475491 TAF3Q5VWG9 929 aa13.12□□□□□ -0.31
KCNIP3-206ENST00000475491 TRMT1LQ7Z2T5 733 aaKnown RBP13.12□□□□□ -0.31
KCNIP3-206ENST00000475491 GJA10Q969M2 543 aa13.12□□□□□ -0.31
KCNIP3-206ENST00000475491 COA7Q96BR5 231 aa13.12□□□□□ -0.31
KCNIP3-206ENST00000475491 GTPBP4Q9BZE4 634 aaKnown RBP13.12□□□□□ -0.31
KCNIP3-206ENST00000475491 BECN2A8MW95 431 aa13.11□□□□□ -0.31
KCNIP3-206ENST00000475491 DHX8Q14562 1220 aaKnown RBP13.11□□□□□ -0.31
KCNIP3-206ENST00000475491 NBPF9Q3BBW0 867 aa13.11□□□□□ -0.31
KCNIP3-206ENST00000475491 TBC1D22AQ8WUA7 517 aa13.11□□□□□ -0.31
KCNIP3-206ENST00000475491 SCN7AQ01118 1682 aa13.11□□□□□ -0.31
KCNIP3-206ENST00000475491 BCORQ6W2J9 1755 aa13.11□□□□□ -0.31
KCNIP3-206ENST00000475491 SPTLC2O15270 562 aa13.11□□□□□ -0.31
KCNIP3-206ENST00000475491 POLD1P28340 1107 aa13.11□□□□□ -0.31
KCNIP3-206ENST00000475491 TMEM39BQ9GZU3 492 aa13.11□□□□□ -0.31
KCNIP3-206ENST00000475491 ALDH8A1Q9H2A2 487 aaPredicted RBP13.11□□□□□ -0.31
KCNIP3-206ENST00000475491 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.11□□□□□ -0.31
KCNIP3-206ENST00000475491 LY75O60449 1722 aa13.11□□□□□ -0.31
KCNIP3-206ENST00000475491 LAMA4Q16363 1823 aa13.11□□□□□ -0.31
KCNIP3-206ENST00000475491 SPDYE4A6NLX3 237 aa13.11□□□□□ -0.31
KCNIP3-206ENST00000475491 FILIP1Q7Z7B0 1213 aa13.11□□□□□ -0.31
KCNIP3-206ENST00000475491 SGMS1Q86VZ5 419 aa13.11□□□□□ -0.31
KCNIP3-206ENST00000475491 ZNF396Q96N95 335 aaPredicted RBP13.11□□□□□ -0.31
KCNIP3-206ENST00000475491 NRBP1Q9UHY1 535 aa13.11□□□□□ -0.31
KCNIP3-206ENST00000475491 CACNA1SQ13698 1873 aa13.11□□□□□ -0.31
KCNIP3-206ENST00000475491 KLRF2D3W0D1 207 aa13.1□□□□□ -0.31
KCNIP3-206ENST00000475491 JAKMIP3Q5VZ66 844 aa13.1□□□□□ -0.31
KCNIP3-206ENST00000475491 ZSCAN16Q9H4T2 348 aaPredicted RBP13.1□□□□□ -0.31
KCNIP3-206ENST00000475491 SALL1Q9NSC2 1324 aa13.1□□□□□ -0.31
KCNIP3-206ENST00000475491 KLRG2A4D1S0 409 aaPredicted RBP13.1□□□□□ -0.31
KCNIP3-206ENST00000475491 FOXN1O15353 648 aa13.1□□□□□ -0.31
KCNIP3-206ENST00000475491 SEPT2Q15019 361 aa13.1□□□□□ -0.31
KCNIP3-206ENST00000475491 DACT2Q5SW24 774 aa13.1□□□□□ -0.31
KCNIP3-206ENST00000475491 ANO1Q5XXA6 986 aa13.1□□□□□ -0.31
KCNIP3-206ENST00000475491 TYW1BQ6NUM6 668 aa13.1□□□□□ -0.31
KCNIP3-206ENST00000475491 OGFOD1Q8N543 542 aa13.1□□□□□ -0.31
KCNIP3-206ENST00000475491 SECISBP2LQ93073 1101 aaKnown RBP13.1□□□□□ -0.31
KCNIP3-206ENST00000475491 SERPINB13Q9UIV8 391 aa13.1□□□□□ -0.31
KCNIP3-206ENST00000475491 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.1□□□□□ -0.31
KCNIP3-206ENST00000475491 SLX4Q8IY92 1834 aa13.1□□□□□ -0.31
KCNIP3-206ENST00000475491 PIGSQ96S52 555 aa13.1□□□□□ -0.31
KCNIP3-206ENST00000475491 CSRNP1Q96S65 589 aa13.1□□□□□ -0.31
KCNIP3-206ENST00000475491 PPP1R9BQ96SB3 815 aa13.1□□□□□ -0.31
KCNIP3-206ENST00000475491 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.1□□□□□ -0.31
KCNIP3-206ENST00000475491 CBX8Q9HC52 389 aa13.1□□□□□ -0.31
KCNIP3-206ENST00000475491 MYH7P12883 1935 aa13.1□□□□□ -0.31
KCNIP3-206ENST00000475491 FMNL1O95466 1100 aaPredicted RBP13.09□□□□□ -0.31
KCNIP3-206ENST00000475491 C11orf57Q6ZUT1 292 aaPredicted RBP13.09□□□□□ -0.31
KCNIP3-206ENST00000475491 TMEM87AQ8NBN3 555 aa13.09□□□□□ -0.31
KCNIP3-206ENST00000475491 GOLGA6L19H0YKK7 550 aa13.09□□□□□ -0.31
KCNIP3-206ENST00000475491 IFNAR1P17181 557 aa13.09□□□□□ -0.31
KCNIP3-206ENST00000475491 ARHGAP27Q6ZUM4 889 aa13.09□□□□□ -0.31
KCNIP3-206ENST00000475491 PODNQ7Z5L7 613 aa13.09□□□□□ -0.31
KCNIP3-206ENST00000475491 RASSF8Q8NHQ8 419 aa13.09□□□□□ -0.31
KCNIP3-206ENST00000475491 MKRN1Q9UHC7 482 aaKnown RBP13.09□□□□□ -0.31
KCNIP3-206ENST00000475491 KCNA3P22001 575 aa13.09□□□□□ -0.31
KCNIP3-206ENST00000475491 SLC35G1Q2M3R5 365 aa13.09□□□□□ -0.31
KCNIP3-206ENST00000475491 USH1GQ495M9 461 aa13.09□□□□□ -0.31
KCNIP3-206ENST00000475491 PIM2Q9P1W9 311 aa13.09□□□□□ -0.31
KCNIP3-206ENST00000475491 BIN2Q9UBW5 565 aaPredicted RBP13.09□□□□□ -0.31
KCNIP3-206ENST00000475491 CYTH3O43739 400 aa13.08□□□□□ -0.32
KCNIP3-206ENST00000475491 AFMP43652 599 aa13.08□□□□□ -0.32
KCNIP3-206ENST00000475491 JAG1P78504 1218 aa13.08□□□□□ -0.32
KCNIP3-206ENST00000475491 CCDC93Q567U6 631 aa13.08□□□□□ -0.32
KCNIP3-206ENST00000475491 JDP2Q8WYK2 163 aa13.08□□□□□ -0.32
KCNIP3-206ENST00000475491 TSC1Q92574 1164 aa13.08□□□□□ -0.32
KCNIP3-206ENST00000475491 LRP5O75197 1615 aa13.08□□□□□ -0.32
KCNIP3-206ENST00000475491 CCDC196A0A1B0GTZ2 297 aa13.08□□□□□ -0.32
KCNIP3-206ENST00000475491 LRMPQ12912 555 aa13.08□□□□□ -0.32
KCNIP3-206ENST00000475491 DLGAP5Q15398 846 aa13.08□□□□□ -0.32
KCNIP3-206ENST00000475491 PKN1Q16512 942 aa13.08□□□□□ -0.32
KCNIP3-206ENST00000475491 DALRD3Q5D0E6 543 aaKnown RBP13.08□□□□□ -0.32
KCNIP3-206ENST00000475491 SLF2Q8IX21 1173 aa13.08□□□□□ -0.32
KCNIP3-206ENST00000475491 NIM1KQ8IY84 436 aa13.08□□□□□ -0.32
KCNIP3-206ENST00000475491 LINC00301Q8NCQ3 95 aa13.08□□□□□ -0.32
KCNIP3-206ENST00000475491 DEXIO95424 95 aa13.08□□□□□ -0.32
KCNIP3-206ENST00000475491 GH2P01242 217 aa13.08□□□□□ -0.32
KCNIP3-206ENST00000475491 CXCL9Q07325 125 aa13.08□□□□□ -0.32
KCNIP3-206ENST00000475491 TMEM260Q9NX78 707 aa13.08□□□□□ -0.32
KCNIP3-206ENST00000475491 VWA3AA6NCI4 1184 aa13.07□□□□□ -0.32
KCNIP3-206ENST00000475491 HLA-DOAP06340 250 aa13.07□□□□□ -0.32
KCNIP3-206ENST00000475491 PTGS1P23219 599 aa13.07□□□□□ -0.32
KCNIP3-206ENST00000475491 INF2Q27J81 1249 aa13.07□□□□□ -0.32
KCNIP3-206ENST00000475491 TMTC3Q6ZXV5 915 aa13.07□□□□□ -0.32
KCNIP3-206ENST00000475491 SH3BP5LQ7L8J4 393 aa13.07□□□□□ -0.32
KCNIP3-206ENST00000475491 TMTC2Q8N394 836 aa13.07□□□□□ -0.32
KCNIP3-206ENST00000475491 OSBPL5Q9H0X9 879 aaPredicted RBP13.07□□□□□ -0.32
KCNIP3-206ENST00000475491 FAM198AQ9UFP1 575 aa13.07□□□□□ -0.32
KCNIP3-206ENST00000475491 NAPAP54920 295 aa13.07□□□□□ -0.32
KCNIP3-206ENST00000475491 KIAA2012Q0VF49 1180 aa13.07□□□□□ -0.32
KCNIP3-206ENST00000475491 SLC30A10Q6XR72 485 aa13.07□□□□□ -0.32
KCNIP3-206ENST00000475491 NOSTRINQ8IVI9 506 aa13.07□□□□□ -0.32
KCNIP3-206ENST00000475491 TOB1P50616 345 aaPredicted RBP13.07□□□□□ -0.32
KCNIP3-206ENST00000475491 EEF2KMTQ96G04 330 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms