RNA–Protein interactions for RNA: ENST00000474006.1

CCDC93-207, Transcript of coiled-coil domain containing 93, humanhuman

TSL 3

Gene CCDC93, Length 467 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-207ENST00000474006 METTL16Q86W50 562 aaKnown RBP8.98□□□□□ -0.97
CCDC93-207ENST00000474006 TBC1D10CQ8IV04 446 aa8.98□□□□□ -0.97
CCDC93-207ENST00000474006 CSRNP1Q96S65 589 aa8.98□□□□□ -0.97
CCDC93-207ENST00000474006 SBF1O95248 1867 aa8.98□□□□□ -0.97
CCDC93-207ENST00000474006 ADM5C9JUS6 153 aa8.97□□□□□ -0.97
CCDC93-207ENST00000474006 PRDM1O75626 825 aa8.97□□□□□ -0.97
CCDC93-207ENST00000474006 YY1P25490 414 aa8.97□□□□□ -0.97
CCDC93-207ENST00000474006 GUCA2AQ02747 115 aa8.97□□□□□ -0.97
CCDC93-207ENST00000474006 MAP3K10Q02779 954 aa8.97□□□□□ -0.97
CCDC93-207ENST00000474006 PDE4BQ07343 736 aa8.97□□□□□ -0.97
CCDC93-207ENST00000474006 KRT32Q14532 448 aa8.97□□□□□ -0.97
CCDC93-207ENST00000474006 SUPT20HL1Q3ZLR7 823 aa8.97□□□□□ -0.97
CCDC93-207ENST00000474006 STOX1Q6ZVD7 989 aa8.97□□□□□ -0.97
CCDC93-207ENST00000474006 C16orf86Q6ZW13 317 aa8.97□□□□□ -0.97
CCDC93-207ENST00000474006 LDHDQ86WU2 507 aa8.97□□□□□ -0.97
CCDC93-207ENST00000474006 ZNF444Q8N0Y2 327 aaPredicted RBP8.97□□□□□ -0.97
CCDC93-207ENST00000474006 CRACR2BQ8N4Y2 399 aaPredicted RBP8.97□□□□□ -0.97
CCDC93-207ENST00000474006 SLC44A5Q8NCS7 719 aa8.97□□□□□ -0.97
CCDC93-207ENST00000474006 NKX2-3Q8TAU0 364 aa8.97□□□□□ -0.97
CCDC93-207ENST00000474006 STAG1Q8WVM7 1258 aa8.97□□□□□ -0.97
CCDC93-207ENST00000474006 HLA-CQ95604 372 aa8.97□□□□□ -0.97
CCDC93-207ENST00000474006 LRCH3Q96II8 777 aa8.97□□□□□ -0.97
CCDC93-207ENST00000474006 NEK1Q96PY6 1258 aa8.97□□□□□ -0.97
CCDC93-207ENST00000474006 KIF2CQ99661 725 aa8.97□□□□□ -0.97
CCDC93-207ENST00000474006 GLIS2Q9BZE0 524 aaPredicted RBP8.97□□□□□ -0.97
CCDC93-207ENST00000474006 EHD4Q9H223 541 aa8.97□□□□□ -0.97
CCDC93-207ENST00000474006 RNF41Q9H4P4 317 aaPredicted RBP8.97□□□□□ -0.97
CCDC93-207ENST00000474006 XPO5Q9HAV4 1204 aaKnown RBP eCLIP8.97□□□□□ -0.97
CCDC93-207ENST00000474006 MKNK2Q9HBH9 465 aa8.97□□□□□ -0.97
CCDC93-207ENST00000474006 SERPINB13Q9UIV8 391 aa8.97□□□□□ -0.97
CCDC93-207ENST00000474006 PPP2R3BQ9Y5P8 575 aa8.97□□□□□ -0.97
CCDC93-207ENST00000474006 PSMA5P28066 241 aa8.96□□□□□ -0.98
CCDC93-207ENST00000474006 SHMT1P34896 483 aa8.96□□□□□ -0.98
CCDC93-207ENST00000474006 TRDNQ13061 729 aa8.96□□□□□ -0.98
CCDC93-207ENST00000474006 COL9A3Q14050 684 aaPredicted RBP8.96□□□□□ -0.98
CCDC93-207ENST00000474006 FAM47AQ5JRC9 791 aa8.96□□□□□ -0.98
CCDC93-207ENST00000474006 RRP12Q5JTH9 1297 aaKnown RBP8.96□□□□□ -0.98
CCDC93-207ENST00000474006 IL17RAQ96F46 866 aa8.96□□□□□ -0.98
CCDC93-207ENST00000474006 JAKMIP1Q96N16 626 aaKnown RBP8.96□□□□□ -0.98
CCDC93-207ENST00000474006 PRR14Q9BWN1 585 aa8.96□□□□□ -0.98
CCDC93-207ENST00000474006 TRIM34Q9BYJ4 488 aa8.96□□□□□ -0.98
CCDC93-207ENST00000474006 TM6SF1Q9BZW5 370 aa8.96□□□□□ -0.98
CCDC93-207ENST00000474006 ZNF287Q9HBT7 754 aa8.96□□□□□ -0.98
CCDC93-207ENST00000474006 PRM3Q9NNZ6 103 aa8.96□□□□□ -0.98
CCDC93-207ENST00000474006 TOMM22Q9NS69 142 aa8.96□□□□□ -0.98
CCDC93-207ENST00000474006 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.96□□□□□ -0.98
CCDC93-207ENST00000474006 ZSWIM5Q9P217 1185 aa8.96□□□□□ -0.98
CCDC93-207ENST00000474006 SWAP70Q9UH65 585 aa8.96□□□□□ -0.98
CCDC93-207ENST00000474006 DDX52Q9Y2R4 599 aaKnown RBP eCLIP8.96□□□□□ -0.98
CCDC93-207ENST00000474006 ATRNL1Q5VV63 1379 aa8.96□□□□□ -0.98
CCDC93-207ENST00000474006 FAM196BA6NMK8 535 aa8.95□□□□□ -0.98
CCDC93-207ENST00000474006 B4E1Z4 1266 aa8.95□□□□□ -0.98
CCDC93-207ENST00000474006 ACTN4O43707 911 aaKnown RBP8.95□□□□□ -0.98
CCDC93-207ENST00000474006 ORC4O43929 436 aa8.95□□□□□ -0.98
CCDC93-207ENST00000474006 RANBP6O60518 1105 aaKnown RBP8.95□□□□□ -0.98
CCDC93-207ENST00000474006 RNF40O75150 1001 aa8.95□□□□□ -0.98
CCDC93-207ENST00000474006 PCP11498 1178 aaKnown RBP8.95□□□□□ -0.98
CCDC93-207ENST00000474006 CPA1P15085 419 aa8.95□□□□□ -0.98
CCDC93-207ENST00000474006 TFAP4Q01664 338 aa8.95□□□□□ -0.98
CCDC93-207ENST00000474006 EXOSC10Q01780 885 aaKnown RBP8.95□□□□□ -0.98
CCDC93-207ENST00000474006 RRP1BQ14684 758 aaKnown RBP8.95□□□□□ -0.98
CCDC93-207ENST00000474006 CERKLQ49MI3 558 aaPredicted RBP8.95□□□□□ -0.98
CCDC93-207ENST00000474006 TATDN1Q6P1N9 297 aa8.95□□□□□ -0.98
CCDC93-207ENST00000474006 CHST3Q7LGC8 479 aa8.95□□□□□ -0.98
CCDC93-207ENST00000474006 NCOA7Q8NI08 942 aa8.95□□□□□ -0.98
CCDC93-207ENST00000474006 ESR2Q92731 530 aa8.95□□□□□ -0.98
CCDC93-207ENST00000474006 HOOK2Q96ED9 719 aa8.95□□□□□ -0.98
CCDC93-207ENST00000474006 KRT23Q9C075 422 aa8.95□□□□□ -0.98
CCDC93-207ENST00000474006 DNAJC18Q9H819 358 aa8.95□□□□□ -0.98
CCDC93-207ENST00000474006 CNNM2Q9H8M5 875 aa8.95□□□□□ -0.98
CCDC93-207ENST00000474006 HERC5Q9UII4 1024 aaKnown RBP8.95□□□□□ -0.98
CCDC93-207ENST00000474006 DOCK2Q92608 1830 aa8.95□□□□□ -0.98
CCDC93-207ENST00000474006 NEDD4P46934 1319 aa8.95□□□□□ -0.98
CCDC93-207ENST00000474006 ZNF646O15015 1829 aaPredicted RBP8.94□□□□□ -0.98
CCDC93-207ENST00000474006 PHF20L1A8MW92 1017 aa8.94□□□□□ -0.98
CCDC93-207ENST00000474006 TRAF5O00463 557 aa8.94□□□□□ -0.98
CCDC93-207ENST00000474006 USP2O75604 605 aaPredicted RBP8.94□□□□□ -0.98
CCDC93-207ENST00000474006 ITGBL1O95965 494 aaPredicted RBP8.94□□□□□ -0.98
CCDC93-207ENST00000474006 HMGB1P09429 215 aaKnown RBP8.94□□□□□ -0.98
CCDC93-207ENST00000474006 CASTP20810 708 aaKnown RBP8.94□□□□□ -0.98
CCDC93-207ENST00000474006 RASA1P20936 1047 aa8.94□□□□□ -0.98
CCDC93-207ENST00000474006 RPS6KB1P23443 525 aa8.94□□□□□ -0.98
CCDC93-207ENST00000474006 MCM5P33992 734 aa8.94□□□□□ -0.98
CCDC93-207ENST00000474006 NEK4P51957 841 aa8.94□□□□□ -0.98
CCDC93-207ENST00000474006 FMR1Q06787 632 aaKnown RBP eCLIP8.94□□□□□ -0.98
CCDC93-207ENST00000474006 PRKG1Q13976 671 aa8.94□□□□□ -0.98
CCDC93-207ENST00000474006 DCAF15Q66K64 600 aa8.94□□□□□ -0.98
CCDC93-207ENST00000474006 BLOC1S2Q6QNY1 142 aa8.94□□□□□ -0.98
CCDC93-207ENST00000474006 RUFY3Q7L099 469 aa8.94□□□□□ -0.98
CCDC93-207ENST00000474006 CYB5R4Q7L1T6 521 aa8.94□□□□□ -0.98
CCDC93-207ENST00000474006 DHX32Q7L7V1 743 aaKnown RBP8.94□□□□□ -0.98
CCDC93-207ENST00000474006 RALYLQ86SE5 291 aaKnown RBP8.94□□□□□ -0.98
CCDC93-207ENST00000474006 MB21D2Q8IYB1 491 aaPredicted RBP8.94□□□□□ -0.98
CCDC93-207ENST00000474006 ZNF784Q8NCA9 323 aaPredicted RBP8.94□□□□□ -0.98
CCDC93-207ENST00000474006 CDCA5Q96FF9 252 aa8.94□□□□□ -0.98
CCDC93-207ENST00000474006 UPF3BQ9BZI7 483 aaKnown RBP8.94□□□□□ -0.98
CCDC93-207ENST00000474006 FZD1Q9UP38 647 aa8.94□□□□□ -0.98
CCDC93-207ENST00000474006 CYP46A1Q9Y6A2 500 aa8.94□□□□□ -0.98
CCDC93-207ENST00000474006 CCDC88AQ3V6T2 1871 aa8.94□□□□□ -0.98
CCDC93-207ENST00000474006 MYO5AQ9Y4I1 1855 aaKnown RBP8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms