RNA–Protein interactions for RNA: ENST00000472267.5

MRPS18B-208, Transcript of mitochondrial ribosomal protein S18B, human

TSL 1 (best)

Gene MRPS18B, Length 1,610 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MRPS18B-208	ENST00000472267	CSPP1	Q1MSJ5	1256 aa		12.47	□□□□□ -0.41
MRPS18B-208	ENST00000472267	SHROOM1	Q2M3G4	852 aa	Predicted RBP	12.47	□□□□□ -0.41
MRPS18B-208	ENST00000472267	RASGRP2	Q7LDG7	609 aa		12.47	□□□□□ -0.41
MRPS18B-208	ENST00000472267	DPF2	Q92785	391 aa		12.47	□□□□□ -0.41
MRPS18B-208	ENST00000472267	MAP3K14	Q99558	947 aa		12.47	□□□□□ -0.41
MRPS18B-208	ENST00000472267	TMEM39B	Q9GZU3	492 aa		12.47	□□□□□ -0.41
MRPS18B-208	ENST00000472267	MAD2L2	Q9UI95	211 aa		12.47	□□□□□ -0.41
MRPS18B-208	ENST00000472267	KCNJ14	Q9UNX9	436 aa		12.47	□□□□□ -0.41
MRPS18B-208	ENST00000472267	MYH4	Q9Y623	1939 aa		12.47	□□□□□ -0.41
MRPS18B-208	ENST00000472267	CNTNAP5	Q8WYK1	1306 aa		12.47	□□□□□ -0.41
MRPS18B-208	ENST00000472267	KIF28P	B7ZC32	967 aa		12.46	□□□□□ -0.41
MRPS18B-208	ENST00000472267	GNAQ	P50148	359 aa		12.46	□□□□□ -0.41
MRPS18B-208	ENST00000472267	MMP14	P50281	582 aa		12.46	□□□□□ -0.41
MRPS18B-208	ENST00000472267	KIF23	Q02241	960 aa	Predicted RBP	12.46	□□□□□ -0.41
MRPS18B-208	ENST00000472267	CEBPZ	Q03701	1054 aa	Known RBP	12.46	□□□□□ -0.41
MRPS18B-208	ENST00000472267	ABCB5	Q2M3G0	1257 aa		12.46	□□□□□ -0.41
MRPS18B-208	ENST00000472267	FKBP1C	Q5VVH2	108 aa		12.46	□□□□□ -0.41
MRPS18B-208	ENST00000472267	TATDN1	Q6P1N9	297 aa		12.46	□□□□□ -0.41
MRPS18B-208	ENST00000472267	USP17L5	A8MUK1	530 aa		12.45	□□□□□ -0.42
MRPS18B-208	ENST00000472267	PARP1	P09874	1014 aa	Known RBP	12.45	□□□□□ -0.42
MRPS18B-208	ENST00000472267	YBX3	P16989	372 aa	Known RBP eCLIP	12.45	□□□□□ -0.42	2e-9	■■■□□ 16.4
MRPS18B-208	ENST00000472267	NOV	P48745	357 aa		12.45	□□□□□ -0.42
MRPS18B-208	ENST00000472267	TNNI2	P48788	182 aa		12.45	□□□□□ -0.42
MRPS18B-208	ENST00000472267	SAFB	Q15424	915 aa	Known RBP eCLIP	12.45	□□□□□ -0.42
MRPS18B-208	ENST00000472267	PKN1	Q16512	942 aa		12.45	□□□□□ -0.42
MRPS18B-208	ENST00000472267	KIF4B	Q2VIQ3	1234 aa		12.45	□□□□□ -0.42
MRPS18B-208	ENST00000472267	USP17L2	Q6R6M4	530 aa		12.45	□□□□□ -0.42
MRPS18B-208	ENST00000472267	FAM83A	Q86UY5	434 aa		12.45	□□□□□ -0.42
MRPS18B-208	ENST00000472267	METTL16	Q86W50	562 aa	Known RBP	12.45	□□□□□ -0.42
MRPS18B-208	ENST00000472267	CDAN1	Q8IWY9	1227 aa		12.45	□□□□□ -0.42
MRPS18B-208	ENST00000472267	TMEM87A	Q8NBN3	555 aa		12.45	□□□□□ -0.42
MRPS18B-208	ENST00000472267	GPT2	Q8TD30	523 aa		12.45	□□□□□ -0.42
MRPS18B-208	ENST00000472267	SPATA32	Q96LK8	384 aa		12.45	□□□□□ -0.42
MRPS18B-208	ENST00000472267	ZNF396	Q96N95	335 aa	Predicted RBP	12.45	□□□□□ -0.42
MRPS18B-208	ENST00000472267	RNF181	Q9P0P0	153 aa		12.45	□□□□□ -0.42
MRPS18B-208	ENST00000472267	VPS54	Q9P1Q0	977 aa		12.45	□□□□□ -0.42
MRPS18B-208	ENST00000472267	HERC5	Q9UII4	1024 aa	Known RBP	12.45	□□□□□ -0.42
MRPS18B-208	ENST00000472267	GREB1L	Q9C091	1923 aa	Predicted RBP	12.45	□□□□□ -0.42
MRPS18B-208	ENST00000472267	PALM3	A6NDB9	673 aa	Predicted RBP	12.44	□□□□□ -0.42
MRPS18B-208	ENST00000472267	KLRF2	D3W0D1	207 aa		12.44	□□□□□ -0.42
MRPS18B-208	ENST00000472267		H7C1D1	291 aa		12.44	□□□□□ -0.42
MRPS18B-208	ENST00000472267	RAD21	O60216	631 aa		12.44	□□□□□ -0.42
MRPS18B-208	ENST00000472267	XBP1	P17861	261 aa		12.44	□□□□□ -0.42
MRPS18B-208	ENST00000472267	SEPT2	Q15019	361 aa		12.44	□□□□□ -0.42
MRPS18B-208	ENST00000472267	KLHL40	Q2TBA0	621 aa		12.44	□□□□□ -0.42
MRPS18B-208	ENST00000472267	PPP4R3B	Q5MIZ7	849 aa		12.44	□□□□□ -0.42
MRPS18B-208	ENST00000472267	SCAND2P	Q9GZW5	306 aa	Predicted RBP	12.44	□□□□□ -0.42
MRPS18B-208	ENST00000472267	CABP5	Q9NP86	173 aa		12.44	□□□□□ -0.42
MRPS18B-208	ENST00000472267	CFAP45	Q9UL16	551 aa		12.44	□□□□□ -0.42
MRPS18B-208	ENST00000472267	ASTN2	O75129	1339 aa	Predicted RBP	12.44	□□□□□ -0.42
MRPS18B-208	ENST00000472267	FRMPD2	Q68DX3	1309 aa	Predicted RBP	12.44	□□□□□ -0.42
MRPS18B-208	ENST00000472267	GH2	P01242	217 aa		12.44	□□□□□ -0.42
MRPS18B-208	ENST00000472267	MMP1	P03956	469 aa		12.44	□□□□□ -0.42
MRPS18B-208	ENST00000472267	EEF2	P13639	858 aa	Known RBP	12.44	□□□□□ -0.42
MRPS18B-208	ENST00000472267	RASA3	Q14644	834 aa		12.44	□□□□□ -0.42
MRPS18B-208	ENST00000472267	RRP1B	Q14684	758 aa	Known RBP	12.44	□□□□□ -0.42
MRPS18B-208	ENST00000472267	CAVIN1	Q6NZI2	390 aa	Known RBP	12.44	□□□□□ -0.42
MRPS18B-208	ENST00000472267	TMEM179	Q6ZVK1	233 aa		12.44	□□□□□ -0.42
MRPS18B-208	ENST00000472267	MIGA2	Q7L4E1	593 aa		12.44	□□□□□ -0.42
MRPS18B-208	ENST00000472267	BRAP	Q7Z569	592 aa		12.44	□□□□□ -0.42
MRPS18B-208	ENST00000472267	RGS22	Q8NE09	1264 aa		12.44	□□□□□ -0.42
MRPS18B-208	ENST00000472267	LEO1	Q8WVC0	666 aa	Predicted RBP	12.44	□□□□□ -0.42
MRPS18B-208	ENST00000472267	LZTS2	Q9BRK4	669 aa		12.44	□□□□□ -0.42
MRPS18B-208	ENST00000472267	FTO	Q9C0B1	505 aa	Known RBP eCLIP	12.44	□□□□□ -0.42
MRPS18B-208	ENST00000472267	CPVL	Q9H3G5	476 aa		12.44	□□□□□ -0.42
MRPS18B-208	ENST00000472267	KANSL2	Q9H9L4	492 aa		12.44	□□□□□ -0.42
MRPS18B-208	ENST00000472267	GPCPD1	Q9NPB8	672 aa		12.44	□□□□□ -0.42
MRPS18B-208	ENST00000472267	HACL1	Q9UJ83	578 aa		12.44	□□□□□ -0.42
MRPS18B-208	ENST00000472267	ISY1	Q9ULR0	285 aa	Known RBP	12.44	□□□□□ -0.42
MRPS18B-208	ENST00000472267	MBD3	O95983	291 aa		12.43	□□□□□ -0.42
MRPS18B-208	ENST00000472267	PDHB	P11177	359 aa		12.43	□□□□□ -0.42
MRPS18B-208	ENST00000472267	SCG2	P13521	617 aa		12.43	□□□□□ -0.42
MRPS18B-208	ENST00000472267	JAG1	P78504	1218 aa		12.43	□□□□□ -0.42
MRPS18B-208	ENST00000472267	ICA1	Q05084	483 aa		12.43	□□□□□ -0.42
MRPS18B-208	ENST00000472267	TNFAIP1	Q13829	316 aa		12.43	□□□□□ -0.42
MRPS18B-208	ENST00000472267	CCDC96	Q2M329	555 aa		12.43	□□□□□ -0.42
MRPS18B-208	ENST00000472267	DIS3L2	Q8IYB7	885 aa	Known RBP	12.43	□□□□□ -0.42
MRPS18B-208	ENST00000472267	GPC2	Q8N158	579 aa		12.43	□□□□□ -0.42
MRPS18B-208	ENST00000472267	USP28	Q96RU2	1077 aa		12.43	□□□□□ -0.42
MRPS18B-208	ENST00000472267	UBA5	Q9GZZ9	404 aa		12.43	□□□□□ -0.42
MRPS18B-208	ENST00000472267	VAT1L	Q9HCJ6	419 aa		12.43	□□□□□ -0.42
MRPS18B-208	ENST00000472267	RBM27	Q9P2N5	1060 aa	Known RBP	12.43	□□□□□ -0.42
MRPS18B-208	ENST00000472267	BTBD18	B2RXH4	712 aa		12.42	□□□□□ -0.42
MRPS18B-208	ENST00000472267	UBE2H	P62256	183 aa		12.42	□□□□□ -0.42
MRPS18B-208	ENST00000472267	PFKFB3	Q16875	520 aa	Predicted RBP	12.42	□□□□□ -0.42
MRPS18B-208	ENST00000472267	SLC35G1	Q2M3R5	365 aa		12.42	□□□□□ -0.42
MRPS18B-208	ENST00000472267	MYSM1	Q5VVJ2	828 aa		12.42	□□□□□ -0.42
MRPS18B-208	ENST00000472267	C9orf131	Q5VYM1	1079 aa		12.42	□□□□□ -0.42
MRPS18B-208	ENST00000472267	TRPM4	Q8TD43	1214 aa		12.42	□□□□□ -0.42
MRPS18B-208	ENST00000472267	SHISA4	Q96DD7	197 aa		12.42	□□□□□ -0.42
MRPS18B-208	ENST00000472267	GPRC5D	Q9NZD1	345 aa		12.42	□□□□□ -0.42
MRPS18B-208	ENST00000472267	NYAP2	Q9P242	653 aa		12.42	□□□□□ -0.42
MRPS18B-208	ENST00000472267	GOLGA6L4	A6NEF3	574 aa		12.41	□□□□□ -0.42
MRPS18B-208	ENST00000472267	CYTH3	O43739	400 aa		12.41	□□□□□ -0.42
MRPS18B-208	ENST00000472267	DDN	O94850	711 aa	Predicted RBP	12.41	□□□□□ -0.42
MRPS18B-208	ENST00000472267	VEGFA	P15692	232 aa	Predicted RBP	12.41	□□□□□ -0.42
MRPS18B-208	ENST00000472267	EPS15	P42566	896 aa		12.41	□□□□□ -0.42
MRPS18B-208	ENST00000472267	GSE1	Q14687	1217 aa		12.41	□□□□□ -0.42
MRPS18B-208	ENST00000472267	ASPRV1	Q53RT3	343 aa		12.41	□□□□□ -0.42
MRPS18B-208	ENST00000472267	ATL3	Q6DD88	541 aa		12.41	□□□□□ -0.42

Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms