RNA–Protein interactions for RNA: ENST00000469975.5

C4A-250, Transcript of complement C4A (Rodgers blood group), humanhuman

TSL 1 (best)

Gene C4A, Length 830 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C4A-250ENST00000469975 TMEM179Q6ZVK1 233 aa20.27■□□□□ 0.84
C4A-250ENST00000469975 SPICE1Q8N0Z3 855 aa20.27■□□□□ 0.84
C4A-250ENST00000469975 APBA2Q99767 749 aa20.27■□□□□ 0.84
C4A-250ENST00000469975 DCTPP1Q9H773 170 aa20.27■□□□□ 0.84
C4A-250ENST00000469975 FLRT1Q9NZU1 646 aa20.27■□□□□ 0.84
C4A-250ENST00000469975 SWAP70Q9UH65 585 aa20.27■□□□□ 0.84
C4A-250ENST00000469975 CCNA1P78396 465 aa20.26■□□□□ 0.83
C4A-250ENST00000469975 CTR9Q6PD62 1173 aa20.26■□□□□ 0.83
C4A-250ENST00000469975 LBX2Q6XYB7 198 aa20.26■□□□□ 0.83
C4A-250ENST00000469975 NECAB2Q7Z6G3 386 aa20.26■□□□□ 0.83
C4A-250ENST00000469975 STK11IPQ8N1F8 1099 aa20.26■□□□□ 0.83
C4A-250ENST00000469975 PCDH10Q9P2E7 1040 aa20.26■□□□□ 0.83
C4A-250ENST00000469975 NR2E3Q9Y5X4 410 aa20.26■□□□□ 0.83
C4A-250ENST00000469975 PTPREP23469 700 aa20.25■□□□□ 0.83
C4A-250ENST00000469975 ICA1Q05084 483 aa20.25■□□□□ 0.83
C4A-250ENST00000469975 SAMD1Q6SPF0 538 aaPredicted RBP20.25■□□□□ 0.83
C4A-250ENST00000469975 OGDHLQ9ULD0 1010 aa20.25■□□□□ 0.83
C4A-250ENST00000469975 GREB1LQ9C091 1923 aaPredicted RBP20.24■□□□□ 0.83
C4A-250ENST00000469975 COG2Q14746 738 aa20.24■□□□□ 0.83
C4A-250ENST00000469975 ZSCAN25Q6NSZ9 544 aa20.24■□□□□ 0.83
C4A-250ENST00000469975 C16orf86Q6ZW13 317 aa20.24■□□□□ 0.83
C4A-250ENST00000469975 C7orf61Q8IZ16 206 aa20.24■□□□□ 0.83
C4A-250ENST00000469975 ANKLE1Q8NAG6 615 aa20.24■□□□□ 0.83
C4A-250ENST00000469975 NPLOC4Q8TAT6 608 aa20.24■□□□□ 0.83
C4A-250ENST00000469975 PCDHB15Q9Y5E8 787 aa20.24■□□□□ 0.83
C4A-250ENST00000469975 ZNFX1Q9P2E3 1918 aaKnown RBP20.23■□□□□ 0.83
C4A-250ENST00000469975 SLC15A5A6NIM6 579 aa20.23■□□□□ 0.83
C4A-250ENST00000469975 ATP2B2Q01814 1243 aa20.23■□□□□ 0.83
C4A-250ENST00000469975 LHX8Q68G74 356 aa20.23■□□□□ 0.83
C4A-250ENST00000469975 TRMT44Q8IYL2 757 aaKnown RBP20.23■□□□□ 0.83
C4A-250ENST00000469975 OSBP2Q969R2 916 aa20.23■□□□□ 0.83
C4A-250ENST00000469975 STRBPQ96SI9 672 aaKnown RBP20.23■□□□□ 0.83
C4A-250ENST00000469975 MOV10L1Q9BXT6 1211 aaKnown RBP20.23■□□□□ 0.83
C4A-250ENST00000469975 PRO3102Q9H379 93 aa20.23■□□□□ 0.83
C4A-250ENST00000469975 ARHGEF10LQ9HCE6 1279 aa20.23■□□□□ 0.83
C4A-250ENST00000469975 GLRX3O76003 335 aaKnown RBP20.22■□□□□ 0.83
C4A-250ENST00000469975 EEF2P13639 858 aaKnown RBP20.22■□□□□ 0.83
C4A-250ENST00000469975 CAPN2P17655 700 aa20.22■□□□□ 0.83
C4A-250ENST00000469975 GRB14Q14449 540 aa20.22■□□□□ 0.83
C4A-250ENST00000469975 AMOTL1Q8IY63 956 aa20.22■□□□□ 0.83
C4A-250ENST00000469975 KBTBD3Q8NAB2 608 aa20.22■□□□□ 0.83
C4A-250ENST00000469975 OTUD7AQ8TE49 926 aaPredicted RBP20.22■□□□□ 0.83
C4A-250ENST00000469975 ATG4CQ96DT6 458 aa20.22■□□□□ 0.83
C4A-250ENST00000469975 DDRGK1Q96HY6 314 aa20.22■□□□□ 0.83
C4A-250ENST00000469975 NBPF3Q9H094 633 aa20.22■□□□□ 0.83
C4A-250ENST00000469975 C11orf49Q9H6J7 331 aa20.22■□□□□ 0.83
C4A-250ENST00000469975 VCPKMTQ9H867 229 aa20.22■□□□□ 0.83
C4A-250ENST00000469975 ZMYND8Q9ULU4 1186 aaPredicted RBP20.22■□□□□ 0.83
C4A-250ENST00000469975 TMX2Q9Y320 296 aa20.22■□□□□ 0.83
C4A-250ENST00000469975 IVNS1ABPQ9Y6Y0 642 aa20.22■□□□□ 0.83
C4A-250ENST00000469975 ZNF236Q9UL36 1845 aa20.22■□□□□ 0.83
C4A-250ENST00000469975 PFASO15067 1338 aa20.22■□□□□ 0.83
C4A-250ENST00000469975 RANBP2P49792 3224 aaKnown RBP20.21■□□□□ 0.83
C4A-250ENST00000469975 GSG1L2A8MUP6 293 aa20.21■□□□□ 0.83
C4A-250ENST00000469975 FLOT1O75955 427 aa20.21■□□□□ 0.83
C4A-250ENST00000469975 DSG3P32926 999 aa20.21■□□□□ 0.83
C4A-250ENST00000469975 SPATC1LQ9H0A9 340 aa20.21■□□□□ 0.83
C4A-250ENST00000469975 HOXC10Q9NYD6 342 aa20.21■□□□□ 0.83
C4A-250ENST00000469975 STAP2Q9UGK3 403 aa20.21■□□□□ 0.83
C4A-250ENST00000469975 MYH4Q9Y623 1939 aa20.2■□□□□ 0.82
C4A-250ENST00000469975 M0R2C6 588 aa20.2■□□□□ 0.82
C4A-250ENST00000469975 ERCC3P19447 782 aa20.2■□□□□ 0.82
C4A-250ENST00000469975 CYP2C19P33261 490 aa20.2■□□□□ 0.82
C4A-250ENST00000469975 PLS1Q14651 629 aa20.2■□□□□ 0.82
C4A-250ENST00000469975 TRPV1Q8NER1 839 aa20.2■□□□□ 0.82
C4A-250ENST00000469975 CCDC17Q96LX7 622 aa20.2■□□□□ 0.82
C4A-250ENST00000469975 GNL3Q9BVP2 549 aaKnown RBP eCLIP20.2■□□□□ 0.82
C4A-250ENST00000469975 MINDY4BA8MYZ0 360 aa20.19■□□□□ 0.82
C4A-250ENST00000469975 RNF113AO15541 343 aaKnown RBP20.19■□□□□ 0.82
C4A-250ENST00000469975 RAD21O60216 631 aa20.19■□□□□ 0.82
C4A-250ENST00000469975 SYN1P17600 705 aa20.19■□□□□ 0.82
C4A-250ENST00000469975 MFSD14CQ5VZR4 134 aa20.19■□□□□ 0.82
C4A-250ENST00000469975 APPBP2Q92624 585 aa20.19■□□□□ 0.82
C4A-250ENST00000469975 LPAR1Q92633 364 aa20.19■□□□□ 0.82
C4A-250ENST00000469975 GPATCH3Q96I76 525 aa20.19■□□□□ 0.82
C4A-250ENST00000469975 EPB41L4AQ9HCS5 686 aaPredicted RBP20.19■□□□□ 0.82
C4A-250ENST00000469975 FBXO28Q9NVF7 368 aa20.19■□□□□ 0.82
C4A-250ENST00000469975 ARPP21Q9UBL0 812 aaPredicted RBP20.19■□□□□ 0.82
C4A-250ENST00000469975 HOXC6P09630 235 aa20.18■□□□□ 0.82
C4A-250ENST00000469975 ADORA2AP29274 412 aa20.18■□□□□ 0.82
C4A-250ENST00000469975 CNGA1P29973 690 aa20.18■□□□□ 0.82
C4A-250ENST00000469975 SH2D4AQ9H788 454 aa20.18■□□□□ 0.82
C4A-250ENST00000469975 PLXNA1Q9UIW2 1896 aa20.18■□□□□ 0.82
C4A-250ENST00000469975 WDR46O15213 610 aaKnown RBP20.17■□□□□ 0.82
C4A-250ENST00000469975 GPAA1O43292 621 aa20.17■□□□□ 0.82
C4A-250ENST00000469975 COBLO75128 1261 aa20.17■□□□□ 0.82
C4A-250ENST00000469975 RASA1P20936 1047 aa20.17■□□□□ 0.82
C4A-250ENST00000469975 TMEM132BQ14DG7 1078 aa20.17■□□□□ 0.82
C4A-250ENST00000469975 SBK1Q52WX2 424 aa20.17■□□□□ 0.82
C4A-250ENST00000469975 DPP9Q86TI2 863 aa20.17■□□□□ 0.82
C4A-250ENST00000469975 NCAPG2Q86XI2 1143 aa20.17■□□□□ 0.82
C4A-250ENST00000469975 SEC62Q99442 399 aaKnown RBP20.17■□□□□ 0.82
C4A-250ENST00000469975 KANSL2Q9H9L4 492 aa20.17■□□□□ 0.82
C4A-250ENST00000469975 SZT2Q5T011 3432 aa20.17■□□□□ 0.82
C4A-250ENST00000469975 COL6A1P12109 1028 aa20.16■□□□□ 0.82
C4A-250ENST00000469975 RRP1P56182 461 aaKnown RBP20.16■□□□□ 0.82
C4A-250ENST00000469975 FAM83BQ5T0W9 1011 aa20.16■□□□□ 0.82
C4A-250ENST00000469975 SHCBP1Q8NEM2 672 aa20.16■□□□□ 0.82
C4A-250ENST00000469975 PI4K2BQ8TCG2 481 aa20.16■□□□□ 0.82
C4A-250ENST00000469975 NUP88Q99567 741 aaPredicted RBP20.16■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms