RNA–Protein interactions for RNA: ENST00000469443.2

PHGDH-204, Transcript of phosphoglycerate dehydrogenase, humanhuman

TSL 2

Gene PHGDH, Length 653 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-204ENST00000469443 LBX2Q6XYB7 198 aa21.84■■□□□ 1.09
PHGDH-204ENST00000469443 LPAR1Q92633 364 aa21.84■■□□□ 1.09
PHGDH-204ENST00000469443 NACAP1Q9BZK3 213 aa21.84■■□□□ 1.09
PHGDH-204ENST00000469443 KANSL2Q9H9L4 492 aa21.84■■□□□ 1.09
PHGDH-204ENST00000469443 MKNK2Q9HBH9 465 aa21.84■■□□□ 1.09
PHGDH-204ENST00000469443 GJD2Q9UKL4 321 aa21.84■■□□□ 1.09
PHGDH-204ENST00000469443 COL11A1P12107 1806 aaPredicted RBP21.84■■□□□ 1.09
PHGDH-204ENST00000469443 SPDYE16A6NNV3 312 aaPredicted RBP21.83■■□□□ 1.09
PHGDH-204ENST00000469443 CCL5P13501 91 aa21.83■■□□□ 1.09
PHGDH-204ENST00000469443 RASA1P20936 1047 aa21.83■■□□□ 1.09
PHGDH-204ENST00000469443 CHD1LQ86WJ1 897 aa21.83■■□□□ 1.09
PHGDH-204ENST00000469443 STK11IPQ8N1F8 1099 aa21.83■■□□□ 1.09
PHGDH-204ENST00000469443 VCPKMTQ9H867 229 aa21.83■■□□□ 1.09
PHGDH-204ENST00000469443 CNMDO75829 334 aa21.82■■□□□ 1.08
PHGDH-204ENST00000469443 INHAP05111 366 aa21.82■■□□□ 1.08
PHGDH-204ENST00000469443 EEF2P13639 858 aaKnown RBP21.82■■□□□ 1.08
PHGDH-204ENST00000469443 NUCB1Q02818 461 aa21.82■■□□□ 1.08
PHGDH-204ENST00000469443 KIAA1755Q5JYT7 1200 aa21.82■■□□□ 1.08
PHGDH-204ENST00000469443 TICAM2Q86XR7 235 aa21.82■■□□□ 1.08
PHGDH-204ENST00000469443 CCAR1Q8IX12 1150 aaKnown RBP21.82■■□□□ 1.08
PHGDH-204ENST00000469443 NAPBQ9H115 298 aa21.82■■□□□ 1.08
PHGDH-204ENST00000469443 PORCNQ9H237 461 aa21.82■■□□□ 1.08
PHGDH-204ENST00000469443 ZNF287Q9HBT7 754 aa21.82■■□□□ 1.08
PHGDH-204ENST00000469443 CCNA1P78396 465 aa21.81■■□□□ 1.08
PHGDH-204ENST00000469443 ATP2B2Q01814 1243 aa21.81■■□□□ 1.08
PHGDH-204ENST00000469443 COG2Q14746 738 aa21.81■■□□□ 1.08
PHGDH-204ENST00000469443 CCDC129Q6ZRS4 1044 aa21.81■■□□□ 1.08
PHGDH-204ENST00000469443 NUDT12Q9BQG2 462 aa21.81■■□□□ 1.08
PHGDH-204ENST00000469443 GNL3Q9BVP2 549 aaKnown RBP eCLIP21.81■■□□□ 1.08
PHGDH-204ENST00000469443 TANGO6Q9C0B7 1094 aa21.81■■□□□ 1.08
PHGDH-204ENST00000469443 RNF208Q9H0X6 261 aa21.81■■□□□ 1.08
PHGDH-204ENST00000469443 HOXC10Q9NYD6 342 aa21.81■■□□□ 1.08
PHGDH-204ENST00000469443 GJB1P08034 283 aa21.8■■□□□ 1.08
PHGDH-204ENST00000469443 SOCS4Q8WXH5 440 aa21.8■■□□□ 1.08
PHGDH-204ENST00000469443 HELLSQ9NRZ9 838 aa21.8■■□□□ 1.08
PHGDH-204ENST00000469443 BTBD7Q9P203 1132 aa21.8■■□□□ 1.08
PHGDH-204ENST00000469443 ZNFX1Q9P2E3 1918 aaKnown RBP21.79■■□□□ 1.08
PHGDH-204ENST00000469443 WDR46O15213 610 aaKnown RBP21.79■■□□□ 1.08
PHGDH-204ENST00000469443 GPR142Q7Z601 462 aa21.79■■□□□ 1.08
PHGDH-204ENST00000469443 PLEKHH3Q7Z736 793 aa21.79■■□□□ 1.08
PHGDH-204ENST00000469443 PLEKHM2Q8IWE5 1019 aa21.79■■□□□ 1.08
PHGDH-204ENST00000469443 SPICE1Q8N0Z3 855 aa21.79■■□□□ 1.08
PHGDH-204ENST00000469443 NKX2-3Q8TAU0 364 aa21.79■■□□□ 1.08
PHGDH-204ENST00000469443 UNC93B1Q9H1C4 597 aa21.79■■□□□ 1.08
PHGDH-204ENST00000469443 OSBPL3Q9H4L5 887 aa21.79■■□□□ 1.08
PHGDH-204ENST00000469443 TRIM6-TRIM34B2RNG4 842 aa21.78■■□□□ 1.08
PHGDH-204ENST00000469443 HMGCRP04035 888 aa21.78■■□□□ 1.08
PHGDH-204ENST00000469443 GJA8P48165 433 aa21.78■■□□□ 1.08
PHGDH-204ENST00000469443 ZNF444Q8N0Y2 327 aaPredicted RBP21.78■■□□□ 1.08
PHGDH-204ENST00000469443 SHISA4Q96DD7 197 aa21.78■■□□□ 1.08
PHGDH-204ENST00000469443 CWC22Q9HCG8 908 aaKnown RBP21.78■■□□□ 1.08
PHGDH-204ENST00000469443 GOPCQ9HD26 462 aa21.78■■□□□ 1.08
PHGDH-204ENST00000469443 FOXP2O15409 715 aa21.77■■□□□ 1.08
PHGDH-204ENST00000469443 PRDM1O75626 825 aa21.77■■□□□ 1.08
PHGDH-204ENST00000469443 SLC3A2P08195 630 aaKnown RBP21.77■■□□□ 1.08
PHGDH-204ENST00000469443 XRCC5P13010 732 aaKnown RBP21.77■■□□□ 1.08
PHGDH-204ENST00000469443 CYP2B6P20813 491 aa21.77■■□□□ 1.08
PHGDH-204ENST00000469443 DSG3P32926 999 aa21.77■■□□□ 1.08
PHGDH-204ENST00000469443 PDE4BQ07343 736 aa21.77■■□□□ 1.08
PHGDH-204ENST00000469443 PPARAQ07869 468 aa21.77■■□□□ 1.08
PHGDH-204ENST00000469443 MORN1Q5T089 497 aa21.77■■□□□ 1.08
PHGDH-204ENST00000469443 USP6NLQ92738 828 aa21.77■■□□□ 1.08
PHGDH-204ENST00000469443 RILPL2Q969X0 211 aa21.77■■□□□ 1.08
PHGDH-204ENST00000469443 NYAP2Q9P242 653 aa21.77■■□□□ 1.08
PHGDH-204ENST00000469443 ZNF236Q9UL36 1845 aa21.76■■□□□ 1.07
PHGDH-204ENST00000469443 A0A0D9SFI3 127 aa21.76■■□□□ 1.07
PHGDH-204ENST00000469443 FLOT1O75955 427 aa21.76■■□□□ 1.07
PHGDH-204ENST00000469443 IRX6P78412 446 aaPredicted RBP21.76■■□□□ 1.07
PHGDH-204ENST00000469443 MCMDC2Q4G0Z9 681 aa21.76■■□□□ 1.07
PHGDH-204ENST00000469443 MB21D1Q8N884 522 aa21.76■■□□□ 1.07
PHGDH-204ENST00000469443 FAM227BQ96M60 508 aa21.76■■□□□ 1.07
PHGDH-204ENST00000469443 IGKV6D-41A0A0C4DH26 115 aa21.75■■□□□ 1.07
PHGDH-204ENST00000469443 RGS2P41220 211 aa21.75■■□□□ 1.07
PHGDH-204ENST00000469443 VPS53Q5VIR6 699 aa21.75■■□□□ 1.07
PHGDH-204ENST00000469443 WDR78Q5VTH9 848 aa21.75■■□□□ 1.07
PHGDH-204ENST00000469443 TRMT44Q8IYL2 757 aaKnown RBP21.75■■□□□ 1.07
PHGDH-204ENST00000469443 U2AF1L4Q8WU68 220 aaKnown RBP21.75■■□□□ 1.07
PHGDH-204ENST00000469443 TRIB2Q92519 343 aa21.75■■□□□ 1.07
PHGDH-204ENST00000469443 PLIN4Q96Q06 1357 aa21.74■■□□□ 1.07
PHGDH-204ENST00000469443 RAD21O60216 631 aa21.74■■□□□ 1.07
PHGDH-204ENST00000469443 SGPL1O95470 568 aa21.74■■□□□ 1.07
PHGDH-204ENST00000469443 NMIQ13287 307 aaPredicted RBP21.74■■□□□ 1.07
PHGDH-204ENST00000469443 ALX1Q15699 326 aa21.74■■□□□ 1.07
PHGDH-204ENST00000469443 PRPF38BQ5VTL8 546 aaKnown RBP21.74■■□□□ 1.07
PHGDH-204ENST00000469443 ATG4CQ96DT6 458 aa21.74■■□□□ 1.07
PHGDH-204ENST00000469443 PAK6Q9NQU5 681 aaPredicted RBP21.74■■□□□ 1.07
PHGDH-204ENST00000469443 IVNS1ABPQ9Y6Y0 642 aa21.74■■□□□ 1.07
PHGDH-204ENST00000469443 SLC15A5A6NIM6 579 aa21.73■■□□□ 1.07
PHGDH-204ENST00000469443 TSPY3P0CV98 308 aa21.73■■□□□ 1.07
PHGDH-204ENST00000469443 TSPY8P0CW00 308 aa21.73■■□□□ 1.07
PHGDH-204ENST00000469443 CAPN2P17655 700 aa21.73■■□□□ 1.07
PHGDH-204ENST00000469443 PTPREP23469 700 aa21.73■■□□□ 1.07
PHGDH-204ENST00000469443 MAP2K5Q13163 448 aa21.73■■□□□ 1.07
PHGDH-204ENST00000469443 NEDD1Q8NHV4 660 aa21.73■■□□□ 1.07
PHGDH-204ENST00000469443 CEP95Q96GE4 821 aa21.73■■□□□ 1.07
PHGDH-204ENST00000469443 APBA2Q99767 749 aa21.73■■□□□ 1.07
PHGDH-204ENST00000469443 MOV10L1Q9BXT6 1211 aaKnown RBP21.73■■□□□ 1.07
PHGDH-204ENST00000469443 SPATC1LQ9H0A9 340 aa21.73■■□□□ 1.07
PHGDH-204ENST00000469443 XRN2Q9H0D6 950 aaKnown RBP eCLIP21.73■■□□□ 1.075e-8■■□□□ 14.4
PHGDH-204ENST00000469443 CLIP2Q9UDT6 1046 aa21.73■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 97.8 ms