RNA–Protein interactions for RNA: ENST00000468704.1

TMEM50A-202, Transcript of transmembrane protein 50A, humanhuman

TSL 3

Gene TMEM50A, Length 799 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM50A-202ENST00000468704 SEC62Q99442 399 aaKnown RBP20.55■□□□□ 0.88
TMEM50A-202ENST00000468704 TMX2Q9Y320 296 aa20.55■□□□□ 0.88
TMEM50A-202ENST00000468704 SUPT16HQ9Y5B9 1047 aaKnown RBP20.55■□□□□ 0.88
TMEM50A-202ENST00000468704 PLXNA1Q9UIW2 1896 aa20.55■□□□□ 0.88
TMEM50A-202ENST00000468704 SPDYE16A6NNV3 312 aaPredicted RBP20.54■□□□□ 0.88
TMEM50A-202ENST00000468704 PATL2C9JE40 543 aaKnown RBP20.54■□□□□ 0.88
TMEM50A-202ENST00000468704 CCNA1P78396 465 aa20.54■□□□□ 0.88
TMEM50A-202ENST00000468704 NKX2-3Q8TAU0 364 aa20.54■□□□□ 0.88
TMEM50A-202ENST00000468704 TANGO6Q9C0B7 1094 aa20.54■□□□□ 0.88
TMEM50A-202ENST00000468704 RNF208Q9H0X6 261 aa20.54■□□□□ 0.88
TMEM50A-202ENST00000468704 VCPKMTQ9H867 229 aa20.54■□□□□ 0.88
TMEM50A-202ENST00000468704 KANSL2Q9H9L4 492 aa20.54■□□□□ 0.88
TMEM50A-202ENST00000468704 RASA1P20936 1047 aa20.53■□□□□ 0.88
TMEM50A-202ENST00000468704 POTEEQ6S8J3 1075 aa20.53■□□□□ 0.88
TMEM50A-202ENST00000468704 IFNL3Q8IZI9 196 aa20.53■□□□□ 0.88
TMEM50A-202ENST00000468704 NAPBQ9H115 298 aa20.53■□□□□ 0.88
TMEM50A-202ENST00000468704 PORCNQ9H237 461 aa20.53■□□□□ 0.88
TMEM50A-202ENST00000468704 MKNK2Q9HBH9 465 aa20.53■□□□□ 0.88
TMEM50A-202ENST00000468704 ZNF287Q9HBT7 754 aa20.53■□□□□ 0.88
TMEM50A-202ENST00000468704 CWC22Q9HCG8 908 aaKnown RBP20.53■□□□□ 0.88
TMEM50A-202ENST00000468704 GJD2Q9UKL4 321 aa20.53■□□□□ 0.88
TMEM50A-202ENST00000468704 CNMDO75829 334 aa20.52■□□□□ 0.88
TMEM50A-202ENST00000468704 HMGCRP04035 888 aa20.52■□□□□ 0.88
TMEM50A-202ENST00000468704 GJB1P08034 283 aa20.52■□□□□ 0.88
TMEM50A-202ENST00000468704 EEF2P13639 858 aaKnown RBP20.52■□□□□ 0.88
TMEM50A-202ENST00000468704 ATP2B2Q01814 1243 aa20.52■□□□□ 0.88
TMEM50A-202ENST00000468704 Q3C1V9 767 aa20.52■□□□□ 0.88
TMEM50A-202ENST00000468704 B4GALNT3Q6L9W6 998 aa20.52■□□□□ 0.88
TMEM50A-202ENST00000468704 TICAM2Q86XR7 235 aa20.52■□□□□ 0.88
TMEM50A-202ENST00000468704 SIAH1Q8IUQ4 282 aa20.52■□□□□ 0.88
TMEM50A-202ENST00000468704 SHISA4Q96DD7 197 aa20.52■□□□□ 0.88
TMEM50A-202ENST00000468704 NUDT12Q9BQG2 462 aa20.52■□□□□ 0.88
TMEM50A-202ENST00000468704 UNC93B1Q9H1C4 597 aa20.52■□□□□ 0.88
TMEM50A-202ENST00000468704 WDR46O15213 610 aaKnown RBP20.51■□□□□ 0.87
TMEM50A-202ENST00000468704 IGHDP01880 384 aa20.51■□□□□ 0.87
TMEM50A-202ENST00000468704 NUCB1Q02818 461 aa20.51■□□□□ 0.87
TMEM50A-202ENST00000468704 COG2Q14746 738 aa20.51■□□□□ 0.87
TMEM50A-202ENST00000468704 KIAA1755Q5JYT7 1200 aa20.51■□□□□ 0.87
TMEM50A-202ENST00000468704 PRPF38BQ5VTL8 546 aaKnown RBP20.51■□□□□ 0.87
TMEM50A-202ENST00000468704 GPR142Q7Z601 462 aa20.51■□□□□ 0.87
TMEM50A-202ENST00000468704 CHD1LQ86WJ1 897 aa20.51■□□□□ 0.87
TMEM50A-202ENST00000468704 STK11IPQ8N1F8 1099 aa20.51■□□□□ 0.87
TMEM50A-202ENST00000468704 GOPCQ9HD26 462 aa20.51■□□□□ 0.87
TMEM50A-202ENST00000468704 PLIN4Q96Q06 1357 aa20.5■□□□□ 0.87
TMEM50A-202ENST00000468704 SLC3A2P08195 630 aaKnown RBP20.5■□□□□ 0.87
TMEM50A-202ENST00000468704 GJA8P48165 433 aa20.5■□□□□ 0.87
TMEM50A-202ENST00000468704 PLEKHH3Q7Z736 793 aa20.5■□□□□ 0.87
TMEM50A-202ENST00000468704 SPICE1Q8N0Z3 855 aa20.5■□□□□ 0.87
TMEM50A-202ENST00000468704 HOXC10Q9NYD6 342 aa20.5■□□□□ 0.87
TMEM50A-202ENST00000468704 BTBD7Q9P203 1132 aa20.5■□□□□ 0.87
TMEM50A-202ENST00000468704 ALPK3Q96L96 1907 aa20.49■□□□□ 0.87
TMEM50A-202ENST00000468704 FLOT1O75955 427 aa20.49■□□□□ 0.87
TMEM50A-202ENST00000468704 XRCC5P13010 732 aaKnown RBP20.49■□□□□ 0.87
TMEM50A-202ENST00000468704 CYP2B6P20813 491 aa20.49■□□□□ 0.87
TMEM50A-202ENST00000468704 CCDC129Q6ZRS4 1044 aa20.49■□□□□ 0.87
TMEM50A-202ENST00000468704 MB21D1Q8N884 522 aa20.49■□□□□ 0.87
TMEM50A-202ENST00000468704 APBA2Q99767 749 aa20.49■□□□□ 0.87
TMEM50A-202ENST00000468704 GNL3Q9BVP2 549 aaKnown RBP eCLIP20.49■□□□□ 0.87
TMEM50A-202ENST00000468704 HELLSQ9NRZ9 838 aa20.49■□□□□ 0.87
TMEM50A-202ENST00000468704 CEP290O15078 2479 aa20.49■□□□□ 0.87
TMEM50A-202ENST00000468704 TRIM6-TRIM34B2RNG4 842 aa20.48■□□□□ 0.87
TMEM50A-202ENST00000468704 RGS2P41220 211 aa20.48■□□□□ 0.87
TMEM50A-202ENST00000468704 PDE4BQ07343 736 aa20.48■□□□□ 0.87
TMEM50A-202ENST00000468704 PPARAQ07869 468 aa20.48■□□□□ 0.87
TMEM50A-202ENST00000468704 MORN1Q5T089 497 aa20.48■□□□□ 0.87
TMEM50A-202ENST00000468704 WDR78Q5VTH9 848 aa20.48■□□□□ 0.87
TMEM50A-202ENST00000468704 TRMT44Q8IYL2 757 aaKnown RBP20.48■□□□□ 0.87
TMEM50A-202ENST00000468704 U2AF1L4Q8WU68 220 aaKnown RBP20.48■□□□□ 0.87
TMEM50A-202ENST00000468704 TRIB2Q92519 343 aa20.48■□□□□ 0.87
TMEM50A-202ENST00000468704 NYAP2Q9P242 653 aa20.48■□□□□ 0.87
TMEM50A-202ENST00000468704 IVNS1ABPQ9Y6Y0 642 aa20.48■□□□□ 0.87
TMEM50A-202ENST00000468704 FOXP2O15409 715 aa20.47■□□□□ 0.87
TMEM50A-202ENST00000468704 PRDM1O75626 825 aa20.47■□□□□ 0.87
TMEM50A-202ENST00000468704 ZKSCAN1P17029 563 aaPredicted RBP20.47■□□□□ 0.87
TMEM50A-202ENST00000468704 DSG3P32926 999 aa20.47■□□□□ 0.87
TMEM50A-202ENST00000468704 ZNF444Q8N0Y2 327 aaPredicted RBP20.47■□□□□ 0.87
TMEM50A-202ENST00000468704 USP6NLQ92738 828 aa20.47■□□□□ 0.87
TMEM50A-202ENST00000468704 OSBPL3Q9H4L5 887 aa20.47■□□□□ 0.87
TMEM50A-202ENST00000468704 PAK6Q9NQU5 681 aaPredicted RBP20.47■□□□□ 0.87
TMEM50A-202ENST00000468704 IGKV6D-41A0A0C4DH26 115 aa20.46■□□□□ 0.87
TMEM50A-202ENST00000468704 A0A0D9SFI3 127 aa20.46■□□□□ 0.87
TMEM50A-202ENST00000468704 CAPN2P17655 700 aa20.46■□□□□ 0.87
TMEM50A-202ENST00000468704 PLEKHM2Q8IWE5 1019 aa20.46■□□□□ 0.87
TMEM50A-202ENST00000468704 RILPL2Q969X0 211 aa20.46■□□□□ 0.87
TMEM50A-202ENST00000468704 ATG4CQ96DT6 458 aa20.46■□□□□ 0.87
TMEM50A-202ENST00000468704 SPATC1LQ9H0A9 340 aa20.46■□□□□ 0.87
TMEM50A-202ENST00000468704 XRN2Q9H0D6 950 aaKnown RBP eCLIP20.46■□□□□ 0.87
TMEM50A-202ENST00000468704 SLC15A5A6NIM6 579 aa20.45■□□□□ 0.86
TMEM50A-202ENST00000468704 RAD21O60216 631 aa20.45■□□□□ 0.86
TMEM50A-202ENST00000468704 SGPL1O95470 568 aa20.45■□□□□ 0.86
TMEM50A-202ENST00000468704 MAP2K5Q13163 448 aa20.45■□□□□ 0.86
TMEM50A-202ENST00000468704 SHCBP1Q8NEM2 672 aa20.45■□□□□ 0.86
TMEM50A-202ENST00000468704 FAM227BQ96M60 508 aa20.45■□□□□ 0.86
TMEM50A-202ENST00000468704 DEFB118Q96PH6 123 aa20.45■□□□□ 0.86
TMEM50A-202ENST00000468704 MOV10L1Q9BXT6 1211 aaKnown RBP20.45■□□□□ 0.86
TMEM50A-202ENST00000468704 RPTORQ8N122 1335 aa20.45■□□□□ 0.86
TMEM50A-202ENST00000468704 FARP2O94887 1054 aaPredicted RBP20.44■□□□□ 0.86
TMEM50A-202ENST00000468704 TSPY3P0CV98 308 aa20.44■□□□□ 0.86
TMEM50A-202ENST00000468704 TSPY8P0CW00 308 aa20.44■□□□□ 0.86
TMEM50A-202ENST00000468704 PTPREP23469 700 aa20.44■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms