RNA–Protein interactions for RNA: ENST00000468117.1

TMEM53-207, Transcript of transmembrane protein 53, humanhuman

TSL 3

Gene TMEM53, Length 2,017 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-207ENST00000468117 GPT2Q8TD30 523 aa23.86■■□□□ 1.41
TMEM53-207ENST00000468117 GZF1Q9H116 711 aaPredicted RBP23.86■■□□□ 1.41
TMEM53-207ENST00000468117 MMP14P50281 582 aa23.85■■□□□ 1.41
TMEM53-207ENST00000468117 PKN1Q16512 942 aa23.85■■□□□ 1.41
TMEM53-207ENST00000468117 KLHL40Q2TBA0 621 aa23.85■■□□□ 1.41
TMEM53-207ENST00000468117 SAMD7Q7Z3H4 446 aa23.85■■□□□ 1.41
TMEM53-207ENST00000468117 TMEM39BQ9GZU3 492 aa23.85■■□□□ 1.41
TMEM53-207ENST00000468117 KIF28PB7ZC32 967 aa23.84■■□□□ 1.41
TMEM53-207ENST00000468117 TTLL1O95922 423 aa23.84■■□□□ 1.41
TMEM53-207ENST00000468117 KIF23Q02241 960 aaPredicted RBP23.84■■□□□ 1.41
TMEM53-207ENST00000468117 CDAN1Q8IWY9 1227 aa23.84■■□□□ 1.41
TMEM53-207ENST00000468117 LRRC47Q8N1G4 583 aaKnown RBP23.84■■□□□ 1.41
TMEM53-207ENST00000468117 CLIP2Q9UDT6 1046 aa23.84■■□□□ 1.41
TMEM53-207ENST00000468117 SCAF8Q9UPN6 1271 aaKnown RBP23.84■■□□□ 1.41
TMEM53-207ENST00000468117 GDF11O95390 407 aa23.83■■□□□ 1.41
TMEM53-207ENST00000468117 GOLGA8HP0CJ92 632 aa23.83■■□□□ 1.41
TMEM53-207ENST00000468117 YBX3P16989 372 aaKnown RBP eCLIP23.83■■□□□ 1.41
TMEM53-207ENST00000468117 TBC1D10BQ4KMP7 808 aaPredicted RBP23.83■■□□□ 1.41
TMEM53-207ENST00000468117 FAM83AQ86UY5 434 aa23.83■■□□□ 1.41
TMEM53-207ENST00000468117 PIBF1Q8WXW3 757 aa23.83■■□□□ 1.41
TMEM53-207ENST00000468117 KCNJ14Q9UNX9 436 aa23.83■■□□□ 1.41
TMEM53-207ENST00000468117 PALM3A6NDB9 673 aaPredicted RBP23.83■■□□□ 1.4
TMEM53-207ENST00000468117 XPO5Q9HAV4 1204 aaKnown RBP eCLIP23.83■■□□□ 1.4
TMEM53-207ENST00000468117 ATP2B2Q01814 1243 aa23.82■■□□□ 1.4
TMEM53-207ENST00000468117 CSPP1Q1MSJ5 1256 aa23.82■■□□□ 1.4
TMEM53-207ENST00000468117 TPRNQ4KMQ1 711 aa23.82■■□□□ 1.4
TMEM53-207ENST00000468117 USP17L2Q6R6M4 530 aa23.82■■□□□ 1.4
TMEM53-207ENST00000468117 HERC5Q9UII4 1024 aaKnown RBP23.82■■□□□ 1.4
TMEM53-207ENST00000468117 PARP1P09874 1014 aaKnown RBP23.81■■□□□ 1.4
TMEM53-207ENST00000468117 GNAQP50148 359 aa23.81■■□□□ 1.4
TMEM53-207ENST00000468117 CEBPZQ03701 1054 aaKnown RBP23.81■■□□□ 1.4
TMEM53-207ENST00000468117 SHISA4Q96DD7 197 aa23.81■■□□□ 1.4
TMEM53-207ENST00000468117 FTOQ9C0B1 505 aaKnown RBP eCLIP23.81■■□□□ 1.4
TMEM53-207ENST00000468117 SCAND2PQ9GZW5 306 aaPredicted RBP23.81■■□□□ 1.4
TMEM53-207ENST00000468117 USP17L5A8MUK1 530 aa23.81■■□□□ 1.4
TMEM53-207ENST00000468117 MMP1P03956 469 aa23.81■■□□□ 1.4
TMEM53-207ENST00000468117 RRP1BQ14684 758 aaKnown RBP23.81■■□□□ 1.4
TMEM53-207ENST00000468117 ABCB5Q2M3G0 1257 aa23.81■■□□□ 1.4
TMEM53-207ENST00000468117 BRAPQ7Z569 592 aa23.81■■□□□ 1.4
TMEM53-207ENST00000468117 SPATA32Q96LK8 384 aa23.81■■□□□ 1.4
TMEM53-207ENST00000468117 VPS54Q9P1Q0 977 aa23.81■■□□□ 1.4
TMEM53-207ENST00000468117 ASTN2O75129 1339 aaPredicted RBP23.8■■□□□ 1.4
TMEM53-207ENST00000468117 KLRF2D3W0D1 207 aa23.8■■□□□ 1.4
TMEM53-207ENST00000468117 SEPT2Q15019 361 aa23.8■■□□□ 1.4
TMEM53-207ENST00000468117 SLC35G1Q2M3R5 365 aa23.8■■□□□ 1.4
TMEM53-207ENST00000468117 CFAP45Q9UL16 551 aa23.8■■□□□ 1.4
TMEM53-207ENST00000468117 CYTH3O43739 400 aa23.79■■□□□ 1.4
TMEM53-207ENST00000468117 PDHBP11177 359 aa23.79■■□□□ 1.4
TMEM53-207ENST00000468117 JAG1P78504 1218 aa23.79■■□□□ 1.4
TMEM53-207ENST00000468117 GNL2Q13823 731 aaKnown RBP23.79■■□□□ 1.4
TMEM53-207ENST00000468117 KIF4BQ2VIQ3 1234 aa23.79■■□□□ 1.4
TMEM53-207ENST00000468117 LEO1Q8WVC0 666 aaPredicted RBP23.79■■□□□ 1.4
TMEM53-207ENST00000468117 USP28Q96RU2 1077 aa23.79■■□□□ 1.4
TMEM53-207ENST00000468117 CPVLQ9H3G5 476 aa23.79■■□□□ 1.4
TMEM53-207ENST00000468117 TMEM179Q6ZVK1 233 aa23.79■■□□□ 1.4
TMEM53-207ENST00000468117 GPC2Q8N158 579 aa23.79■■□□□ 1.4
TMEM53-207ENST00000468117 KANSL2Q9H9L4 492 aa23.79■■□□□ 1.4
TMEM53-207ENST00000468117 PGAP2Q9UHJ9 254 aa23.79■■□□□ 1.4
TMEM53-207ENST00000468117 MBD3O95983 291 aa23.78■■□□□ 1.4
TMEM53-207ENST00000468117 EEF2P13639 858 aaKnown RBP23.78■■□□□ 1.4
TMEM53-207ENST00000468117 VEGFAP15692 232 aaPredicted RBP23.78■■□□□ 1.4
TMEM53-207ENST00000468117 XBP1P17861 261 aa23.78■■□□□ 1.4
TMEM53-207ENST00000468117 U2AF2P26368 475 aaKnown RBP eCLIP23.78■■□□□ 1.4
TMEM53-207ENST00000468117 TNNI2P48788 182 aa23.78■■□□□ 1.4
TMEM53-207ENST00000468117 UBE2HP62256 183 aa23.78■■□□□ 1.4
TMEM53-207ENST00000468117 RASA3Q14644 834 aa23.78■■□□□ 1.4
TMEM53-207ENST00000468117 MYSM1Q5VVJ2 828 aa23.78■■□□□ 1.4
TMEM53-207ENST00000468117 MIGA2Q7L4E1 593 aa23.78■■□□□ 1.4
TMEM53-207ENST00000468117 DIS3L2Q8IYB7 885 aaKnown RBP23.78■■□□□ 1.4
TMEM53-207ENST00000468117 ZNF396Q96N95 335 aaPredicted RBP23.78■■□□□ 1.4
TMEM53-207ENST00000468117 ELP1O95163 1332 aa23.78■■□□□ 1.4
TMEM53-207ENST00000468117 BTBD18B2RXH4 712 aa23.77■■□□□ 1.4
TMEM53-207ENST00000468117 H7C1D1 291 aa23.77■■□□□ 1.4
TMEM53-207ENST00000468117 GH2P01242 217 aa23.77■■□□□ 1.4
TMEM53-207ENST00000468117 SCG2P13521 617 aa23.77■■□□□ 1.4
TMEM53-207ENST00000468117 SAFBQ15424 915 aaKnown RBP eCLIP23.77■■□□□ 1.4
TMEM53-207ENST00000468117 PFKFB3Q16875 520 aaPredicted RBP23.77■■□□□ 1.4
TMEM53-207ENST00000468117 CAVIN1Q6NZI2 390 aaKnown RBP23.77■■□□□ 1.4
TMEM53-207ENST00000468117 FRMPD2Q68DX3 1309 aaPredicted RBP23.77■■□□□ 1.4
TMEM53-207ENST00000468117 ICA1Q05084 483 aa23.77■■□□□ 1.4
TMEM53-207ENST00000468117 PPP4R3BQ5MIZ7 849 aa23.77■■□□□ 1.4
TMEM53-207ENST00000468117 LZTS2Q9BRK4 669 aa23.77■■□□□ 1.4
TMEM53-207ENST00000468117 GPRC5DQ9NZD1 345 aa23.77■■□□□ 1.4
TMEM53-207ENST00000468117 RNF181Q9P0P0 153 aa23.77■■□□□ 1.4
TMEM53-207ENST00000468117 RBM27Q9P2N5 1060 aaKnown RBP23.77■■□□□ 1.4
TMEM53-207ENST00000468117 HACL1Q9UJ83 578 aa23.77■■□□□ 1.4
TMEM53-207ENST00000468117 SNHG28P0DPA3 235 aa23.76■■□□□ 1.39
TMEM53-207ENST00000468117 TNFAIP1Q13829 316 aa23.76■■□□□ 1.39
TMEM53-207ENST00000468117 GSE1Q14687 1217 aa23.76■■□□□ 1.39
TMEM53-207ENST00000468117 ATL3Q6DD88 541 aa23.76■■□□□ 1.39
TMEM53-207ENST00000468117 SIAH1Q8IUQ4 282 aa23.76■■□□□ 1.39
TMEM53-207ENST00000468117 NYAP2Q9P242 653 aa23.76■■□□□ 1.39
TMEM53-207ENST00000468117 PHF20Q9BVI0 1012 aa23.76■■□□□ 1.39
TMEM53-207ENST00000468117 CABP5Q9NP86 173 aa23.76■■□□□ 1.39
TMEM53-207ENST00000468117 OXER1Q8TDS5 423 aa23.75■■□□□ 1.39
TMEM53-207ENST00000468117 MKL1Q969V6 931 aa23.75■■□□□ 1.39
TMEM53-207ENST00000468117 SPZ1Q9BXG8 430 aa23.75■■□□□ 1.39
TMEM53-207ENST00000468117 TBC1D12O60347 775 aa23.74■■□□□ 1.39
TMEM53-207ENST00000468117 NR5A1Q13285 461 aa23.74■■□□□ 1.39
TMEM53-207ENST00000468117 ASPRV1Q53RT3 343 aa23.74■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms