RNA–Protein interactions for RNA: ENST00000466544.5

RNFT1-202, Transcript of ring finger protein, transmembrane 1, humanhuman

TSL 2

Gene RNFT1, Length 1,809 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNFT1-202ENST00000466544 PHKBQ93100 1093 aa16.12■□□□□ 0.17
RNFT1-202ENST00000466544 CPVLQ9H3G5 476 aa16.12■□□□□ 0.17
RNFT1-202ENST00000466544 CTNND1O60716 968 aaKnown RBP16.12■□□□□ 0.17
RNFT1-202ENST00000466544 GJB2P29033 226 aa16.12■□□□□ 0.17
RNFT1-202ENST00000466544 DGKZQ13574 1117 aa16.12■□□□□ 0.17
RNFT1-202ENST00000466544 ZYXQ15942 572 aaKnown RBP16.12■□□□□ 0.17
RNFT1-202ENST00000466544 KIAA1755Q5JYT7 1200 aa16.12■□□□□ 0.17
RNFT1-202ENST00000466544 NYAP2Q9P242 653 aa16.12■□□□□ 0.17
RNFT1-202ENST00000466544 SMC3Q9UQE7 1217 aa16.12■□□□□ 0.17
RNFT1-202ENST00000466544 FRMPD2Q68DX3 1309 aaPredicted RBP16.11■□□□□ 0.17
RNFT1-202ENST00000466544 hCG_1642624A0A1W2PR95 340 aa16.11■□□□□ 0.17
RNFT1-202ENST00000466544 DDAH1O94760 285 aa16.11■□□□□ 0.17
RNFT1-202ENST00000466544 FOSBP53539 338 aa16.11■□□□□ 0.17
RNFT1-202ENST00000466544 TTLL12Q14166 644 aaPredicted RBP16.11■□□□□ 0.17
RNFT1-202ENST00000466544 NTRK3Q16288 839 aa16.11■□□□□ 0.17
RNFT1-202ENST00000466544 NBPF11Q86T75 865 aa16.11■□□□□ 0.17
RNFT1-202ENST00000466544 LDHDQ86WU2 507 aa16.11■□□□□ 0.17
RNFT1-202ENST00000466544 PIBF1Q8WXW3 757 aa16.11■□□□□ 0.17
RNFT1-202ENST00000466544 INTS4Q96HW7 963 aaKnown RBP16.11■□□□□ 0.17
RNFT1-202ENST00000466544 PTPDC1A2A3K4 754 aa16.1■□□□□ 0.17
RNFT1-202ENST00000466544 CPLX1O14810 134 aa16.1■□□□□ 0.17
RNFT1-202ENST00000466544 ASNSP08243 561 aa16.1■□□□□ 0.17
RNFT1-202ENST00000466544 PKP1Q13835 747 aa16.1■□□□□ 0.17
RNFT1-202ENST00000466544 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.1■□□□□ 0.17
RNFT1-202ENST00000466544 SPICE1Q8N0Z3 855 aa16.1■□□□□ 0.17
RNFT1-202ENST00000466544 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.1■□□□□ 0.17
RNFT1-202ENST00000466544 MKL1Q969V6 931 aa16.1■□□□□ 0.17
RNFT1-202ENST00000466544 HOOK2Q96ED9 719 aa16.1■□□□□ 0.17
RNFT1-202ENST00000466544 NUP88Q99567 741 aaPredicted RBP16.1■□□□□ 0.17
RNFT1-202ENST00000466544 MAD2L2Q9UI95 211 aa16.1■□□□□ 0.17
RNFT1-202ENST00000466544 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.1■□□□□ 0.17
RNFT1-202ENST00000466544 FDPSP14324 419 aaKnown RBP16.1■□□□□ 0.17
RNFT1-202ENST00000466544 DDIT3P35638 169 aa16.1■□□□□ 0.17
RNFT1-202ENST00000466544 SLC35G1Q2M3R5 365 aa16.1■□□□□ 0.17
RNFT1-202ENST00000466544 SRBD1Q8N5C6 995 aaKnown RBP16.1■□□□□ 0.17
RNFT1-202ENST00000466544 CNKSR2Q8WXI2 1034 aa16.1■□□□□ 0.17
RNFT1-202ENST00000466544 CLMNQ96JQ2 1002 aa16.1■□□□□ 0.17
RNFT1-202ENST00000466544 GPCPD1Q9NPB8 672 aa16.1■□□□□ 0.17
RNFT1-202ENST00000466544 PDHBP11177 359 aa16.09■□□□□ 0.17
RNFT1-202ENST00000466544 MAP3K9P80192 1104 aa16.09■□□□□ 0.17
RNFT1-202ENST00000466544 VGLL4Q14135 290 aa16.09■□□□□ 0.17
RNFT1-202ENST00000466544 GRM4Q14833 912 aa16.09■□□□□ 0.17
RNFT1-202ENST00000466544 KCTD1Q719H9 257 aa16.09■□□□□ 0.17
RNFT1-202ENST00000466544 SCYL3Q8IZE3 742 aa16.09■□□□□ 0.17
RNFT1-202ENST00000466544 CTCFLQ8NI51 663 aaPredicted RBP16.09■□□□□ 0.17
RNFT1-202ENST00000466544 SMARCC2Q8TAQ2 1214 aa16.09■□□□□ 0.17
RNFT1-202ENST00000466544 UBA5Q9GZZ9 404 aa16.09■□□□□ 0.17
RNFT1-202ENST00000466544 MYH4Q9Y623 1939 aa16.09■□□□□ 0.17
RNFT1-202ENST00000466544 BAZ2BQ9UIF8 2168 aaKnown RBP16.09■□□□□ 0.17
RNFT1-202ENST00000466544 F5H6K3 240 aa16.08■□□□□ 0.17
RNFT1-202ENST00000466544 PPP1R12BO60237 982 aaPredicted RBP16.08■□□□□ 0.17
RNFT1-202ENST00000466544 CALM1P0DP23 149 aa16.08■□□□□ 0.17
RNFT1-202ENST00000466544 CALM2P0DP24 149 aa16.08■□□□□ 0.17
RNFT1-202ENST00000466544 CALM3P0DP25 149 aa16.08■□□□□ 0.17
RNFT1-202ENST00000466544 PTPRAP18433 802 aa16.08■□□□□ 0.17
RNFT1-202ENST00000466544 KLRC3Q07444 240 aa16.08■□□□□ 0.17
RNFT1-202ENST00000466544 FOXD4L5Q5VV16 416 aaPredicted RBP16.08■□□□□ 0.17
RNFT1-202ENST00000466544 SLFN13Q68D06 897 aa16.08■□□□□ 0.17
RNFT1-202ENST00000466544 TTBK2Q6IQ55 1244 aa16.08■□□□□ 0.17
RNFT1-202ENST00000466544 FOXD4L4Q8WXT5 416 aaPredicted RBP16.08■□□□□ 0.17
RNFT1-202ENST00000466544 AIFM3Q96NN9 605 aa16.08■□□□□ 0.17
RNFT1-202ENST00000466544 SLC26A6Q9BXS9 759 aa16.08■□□□□ 0.17
RNFT1-202ENST00000466544 GPBP1L1Q9HC44 474 aaPredicted RBP16.08■□□□□ 0.17
RNFT1-202ENST00000466544 ISY1Q9ULR0 285 aaKnown RBP16.08■□□□□ 0.17
RNFT1-202ENST00000466544 NID2Q14112 1375 aa16.08■□□□□ 0.16
RNFT1-202ENST00000466544 ATAD5Q96QE3 1844 aa16.08■□□□□ 0.16
RNFT1-202ENST00000466544 PALM3A6NDB9 673 aaPredicted RBP16.08■□□□□ 0.16
RNFT1-202ENST00000466544 NDUFB10O96000 172 aa16.08■□□□□ 0.16
RNFT1-202ENST00000466544 NF2P35240 595 aa16.08■□□□□ 0.16
RNFT1-202ENST00000466544 FUT2Q10981 343 aa16.08■□□□□ 0.16
RNFT1-202ENST00000466544 TMTC3Q6ZXV5 915 aa16.08■□□□□ 0.16
RNFT1-202ENST00000466544 ARHGEF10LQ9HCE6 1279 aa16.08■□□□□ 0.16
RNFT1-202ENST00000466544 PICK1Q9NRD5 415 aa16.08■□□□□ 0.16
RNFT1-202ENST00000466544 GJB4Q9NTQ9 266 aa16.08■□□□□ 0.16
RNFT1-202ENST00000466544 SNCAIPQ9Y6H5 919 aa16.08■□□□□ 0.16
RNFT1-202ENST00000466544 ZHX2Q9Y6X8 837 aa16.08■□□□□ 0.16
RNFT1-202ENST00000466544 DHX16O60231 1041 aaKnown RBP16.07■□□□□ 0.16
RNFT1-202ENST00000466544 PARP1P09874 1014 aaKnown RBP16.07■□□□□ 0.16
RNFT1-202ENST00000466544 RCAN1P53805 252 aa16.07■□□□□ 0.16
RNFT1-202ENST00000466544 SPP2Q13103 211 aa16.07■□□□□ 0.16
RNFT1-202ENST00000466544 CCDC96Q2M329 555 aa16.07■□□□□ 0.16
RNFT1-202ENST00000466544 LLPHQ9BRT6 129 aaKnown RBP16.07■□□□□ 0.16
RNFT1-202ENST00000466544 ELP3Q9H9T3 547 aa16.07■□□□□ 0.16
RNFT1-202ENST00000466544 VAT1LQ9HCJ6 419 aa16.07■□□□□ 0.16
RNFT1-202ENST00000466544 ORC3Q9UBD5 711 aaPredicted RBP16.07■□□□□ 0.16
RNFT1-202ENST00000466544 TMX2Q9Y320 296 aa16.07■□□□□ 0.16
RNFT1-202ENST00000466544 TRIM75PA6NK02 468 aa16.06■□□□□ 0.16
RNFT1-202ENST00000466544 KLRF2D3W0D1 207 aa16.06■□□□□ 0.16
RNFT1-202ENST00000466544 CYTH3O43739 400 aa16.06■□□□□ 0.16
RNFT1-202ENST00000466544 ITGBL1O95965 494 aaPredicted RBP16.06■□□□□ 0.16
RNFT1-202ENST00000466544 SNHG28P0DPA3 235 aa16.06■□□□□ 0.16
RNFT1-202ENST00000466544 IFNAR1P17181 557 aa16.06■□□□□ 0.16
RNFT1-202ENST00000466544 SLC16A2P36021 539 aa16.06■□□□□ 0.16
RNFT1-202ENST00000466544 IREB2P48200 963 aaKnown RBP16.06■□□□□ 0.16
RNFT1-202ENST00000466544 OTUD7BQ6GQQ9 843 aa16.06■□□□□ 0.16
RNFT1-202ENST00000466544 CHADLQ6NUI6 762 aa16.06■□□□□ 0.16
RNFT1-202ENST00000466544 RBM28Q9NW13 759 aaKnown RBP16.06■□□□□ 0.16
RNFT1-202ENST00000466544 V9GY48 417 aaPredicted RBP16.06■□□□□ 0.16
RNFT1-202ENST00000466544 CCDC196A0A1B0GTZ2 297 aa16.05■□□□□ 0.16
RNFT1-202ENST00000466544 CELF2O95319 508 aaKnown RBP16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms