RNA–Protein interactions for RNA: ENST00000465628.1

SCAP-209, Transcript of SREBF chaperone, humanhuman

TSL 2

Gene SCAP, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAP-209ENST00000465628 MAPK4P31152 587 aa18.56■□□□□ 0.56
SCAP-209ENST00000465628 NUCB1Q02818 461 aa18.56■□□□□ 0.56
SCAP-209ENST00000465628 MTFR1Q15390 333 aa18.56■□□□□ 0.56
SCAP-209ENST00000465628 SOCS4Q8WXH5 440 aa18.56■□□□□ 0.56
SCAP-209ENST00000465628 KANSL2Q9H9L4 492 aa18.56■□□□□ 0.56
SCAP-209ENST00000465628 GOPCQ9HD26 462 aa18.56■□□□□ 0.56
SCAP-209ENST00000465628 RABGAP1Q9Y3P9 1069 aa18.56■□□□□ 0.56
SCAP-209ENST00000465628 PRDM1O75626 825 aa18.55■□□□□ 0.56
SCAP-209ENST00000465628 FLOT1O75955 427 aa18.55■□□□□ 0.56
SCAP-209ENST00000465628 CCL5P13501 91 aa18.55■□□□□ 0.56
SCAP-209ENST00000465628 EEF2P13639 858 aaKnown RBP18.55■□□□□ 0.56
SCAP-209ENST00000465628 PDE4BQ07343 736 aa18.55■□□□□ 0.56
SCAP-209ENST00000465628 IRF5Q13568 498 aa18.55■□□□□ 0.56
SCAP-209ENST00000465628 ZNF444Q8N0Y2 327 aaPredicted RBP18.55■□□□□ 0.56
SCAP-209ENST00000465628 RNF208Q9H0X6 261 aa18.55■□□□□ 0.56
SCAP-209ENST00000465628 VCPKMTQ9H867 229 aa18.55■□□□□ 0.56
SCAP-209ENST00000465628 RBPJLQ9UBG7 517 aa18.55■□□□□ 0.56
SCAP-209ENST00000465628 PDE4DIPQ5VU43 2346 aa18.55■□□□□ 0.56
SCAP-209ENST00000465628 BRCA2P51587 3418 aa18.54■□□□□ 0.56
SCAP-209ENST00000465628 SPDYE16A6NNV3 312 aaPredicted RBP18.54■□□□□ 0.56
SCAP-209ENST00000465628 CYP2B6P20813 491 aa18.54■□□□□ 0.56
SCAP-209ENST00000465628 RASA1P20936 1047 aa18.54■□□□□ 0.56
SCAP-209ENST00000465628 PPARAQ07869 468 aa18.54■□□□□ 0.56
SCAP-209ENST00000465628 PXYLP1Q8TE99 480 aa18.54■□□□□ 0.56
SCAP-209ENST00000465628 NUDT12Q9BQG2 462 aa18.54■□□□□ 0.56
SCAP-209ENST00000465628 PORCNQ9H237 461 aa18.54■□□□□ 0.56
SCAP-209ENST00000465628 TMX2Q9Y320 296 aa18.54■□□□□ 0.56
SCAP-209ENST00000465628 IVNS1ABPQ9Y6Y0 642 aa18.54■□□□□ 0.56
SCAP-209ENST00000465628 WDR46O15213 610 aaKnown RBP18.53■□□□□ 0.56
SCAP-209ENST00000465628 TSPY3P0CV98 308 aa18.53■□□□□ 0.56
SCAP-209ENST00000465628 TSPY8P0CW00 308 aa18.53■□□□□ 0.56
SCAP-209ENST00000465628 GPR142Q7Z601 462 aa18.53■□□□□ 0.56
SCAP-209ENST00000465628 PLEKHH3Q7Z736 793 aa18.53■□□□□ 0.56
SCAP-209ENST00000465628 FAM227BQ96M60 508 aa18.53■□□□□ 0.56
SCAP-209ENST00000465628 HELLSQ9NRZ9 838 aa18.53■□□□□ 0.56
SCAP-209ENST00000465628 ISY1Q9ULR0 285 aaKnown RBP18.53■□□□□ 0.56
SCAP-209ENST00000465628 TNRC18O15417 2968 aaPredicted RBP18.53■□□□□ 0.56
SCAP-209ENST00000465628 GREB1LQ9C091 1923 aaPredicted RBP18.53■□□□□ 0.56
SCAP-209ENST00000465628 MYH4Q9Y623 1939 aa18.53■□□□□ 0.56
SCAP-209ENST00000465628 A0A0D9SFI3 127 aa18.52■□□□□ 0.56
SCAP-209ENST00000465628 HMGCRP04035 888 aa18.52■□□□□ 0.56
SCAP-209ENST00000465628 PLS1Q14651 629 aa18.52■□□□□ 0.56
SCAP-209ENST00000465628 COG2Q14746 738 aa18.52■□□□□ 0.56
SCAP-209ENST00000465628 UNC93B1Q9H1C4 597 aa18.52■□□□□ 0.56
SCAP-209ENST00000465628 DIAPH3Q9NSV4 1193 aa18.52■□□□□ 0.56
SCAP-209ENST00000465628 HOXC10Q9NYD6 342 aa18.52■□□□□ 0.56
SCAP-209ENST00000465628 A0A0G2JMZ2 1700 aa18.52■□□□□ 0.55
SCAP-209ENST00000465628 ZKSCAN1P17029 563 aaPredicted RBP18.51■□□□□ 0.55
SCAP-209ENST00000465628 RGS2P41220 211 aa18.51■□□□□ 0.55
SCAP-209ENST00000465628 NMIQ13287 307 aaPredicted RBP18.51■□□□□ 0.55
SCAP-209ENST00000465628 Q3C1V9 767 aa18.51■□□□□ 0.55
SCAP-209ENST00000465628 MCMDC2Q4G0Z9 681 aa18.51■□□□□ 0.55
SCAP-209ENST00000465628 KIAA1755Q5JYT7 1200 aa18.51■□□□□ 0.55
SCAP-209ENST00000465628 PLEKHM2Q8IWE5 1019 aa18.51■□□□□ 0.55
SCAP-209ENST00000465628 NKX2-3Q8TAU0 364 aa18.51■□□□□ 0.55
SCAP-209ENST00000465628 TOMM22Q9NS69 142 aa18.51■□□□□ 0.55
SCAP-209ENST00000465628 PLXNB2O15031 1838 aa18.51■□□□□ 0.55
SCAP-209ENST00000465628 CNMDO75829 334 aa18.5■□□□□ 0.55
SCAP-209ENST00000465628 FAM83BQ5T0W9 1011 aa18.5■□□□□ 0.55
SCAP-209ENST00000465628 VPS53Q5VIR6 699 aa18.5■□□□□ 0.55
SCAP-209ENST00000465628 LBX2Q6XYB7 198 aa18.5■□□□□ 0.55
SCAP-209ENST00000465628 SIAH1Q8IUQ4 282 aa18.5■□□□□ 0.55
SCAP-209ENST00000465628 BTBD7Q9P203 1132 aa18.5■□□□□ 0.55
SCAP-209ENST00000465628 CCDC171Q6TFL3 1326 aa18.49■□□□□ 0.55
SCAP-209ENST00000465628 GJB1P08034 283 aa18.49■□□□□ 0.55
SCAP-209ENST00000465628 MFAP1P55081 439 aaKnown RBP18.49■□□□□ 0.55
SCAP-209ENST00000465628 CTDSPL2Q05D32 466 aa18.49■□□□□ 0.55
SCAP-209ENST00000465628 FAM47AQ5JRC9 791 aa18.49■□□□□ 0.55
SCAP-209ENST00000465628 LRRC47Q8N1G4 583 aaKnown RBP18.49■□□□□ 0.55
SCAP-209ENST00000465628 MB21D1Q8N884 522 aa18.49■□□□□ 0.55
SCAP-209ENST00000465628 ATG4CQ96DT6 458 aa18.49■□□□□ 0.55
SCAP-209ENST00000465628 CEP95Q96GE4 821 aa18.49■□□□□ 0.55
SCAP-209ENST00000465628 APBA2Q99767 749 aa18.49■□□□□ 0.55
SCAP-209ENST00000465628 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.49■□□□□ 0.55
SCAP-209ENST00000465628 CLIP2Q9UDT6 1046 aa18.49■□□□□ 0.55
SCAP-209ENST00000465628 PARP14Q460N5 1801 aa18.49■□□□□ 0.55
SCAP-209ENST00000465628 TSPY2A6NKD2 308 aa18.48■□□□□ 0.55
SCAP-209ENST00000465628 DSG3P32926 999 aa18.48■□□□□ 0.55
SCAP-209ENST00000465628 POTEEQ6S8J3 1075 aa18.48■□□□□ 0.55
SCAP-209ENST00000465628 U2AF1L4Q8WU68 220 aaKnown RBP18.48■□□□□ 0.55
SCAP-209ENST00000465628 TRIB2Q92519 343 aa18.48■□□□□ 0.55
SCAP-209ENST00000465628 DEFB118Q96PH6 123 aa18.48■□□□□ 0.55
SCAP-209ENST00000465628 NUP88Q99567 741 aaPredicted RBP18.48■□□□□ 0.55
SCAP-209ENST00000465628 SPATC1LQ9H0A9 340 aa18.48■□□□□ 0.55
SCAP-209ENST00000465628 NYAP2Q9P242 653 aa18.48■□□□□ 0.55
SCAP-209ENST00000465628 GJD2Q9UKL4 321 aa18.48■□□□□ 0.55
SCAP-209ENST00000465628 PLIN4Q96Q06 1357 aa18.47■□□□□ 0.55
SCAP-209ENST00000465628 RANBP6O60518 1105 aaKnown RBP18.47■□□□□ 0.55
SCAP-209ENST00000465628 TTLL1O95922 423 aa18.47■□□□□ 0.55
SCAP-209ENST00000465628 SDSP20132 328 aa18.47■□□□□ 0.55
SCAP-209ENST00000465628 GJA8P48165 433 aa18.47■□□□□ 0.55
SCAP-209ENST00000465628 TFAP4Q01664 338 aa18.47■□□□□ 0.55
SCAP-209ENST00000465628 RRP12Q5JTH9 1297 aaKnown RBP18.47■□□□□ 0.55
SCAP-209ENST00000465628 CWC27Q6UX04 472 aaKnown RBP18.47■□□□□ 0.55
SCAP-209ENST00000465628 ZNF589Q86UQ0 364 aaPredicted RBP18.47■□□□□ 0.55
SCAP-209ENST00000465628 NCAPG2Q86XI2 1143 aa18.47■□□□□ 0.55
SCAP-209ENST00000465628 TICAM2Q86XR7 235 aa18.47■□□□□ 0.55
SCAP-209ENST00000465628 TRMT44Q8IYL2 757 aaKnown RBP18.47■□□□□ 0.55
SCAP-209ENST00000465628 SHISA4Q96DD7 197 aa18.47■□□□□ 0.55
SCAP-209ENST00000465628 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.47■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms