RNA–Protein interactions for RNA: ENST00000465209.1

COL11A1-207, Transcript of collagen type XI alpha 1 chain, humanhuman

TSL 2

Gene COL11A1, Length 297 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-207ENST00000465209 MOV10L1Q9BXT6 1211 aaKnown RBP13.29□□□□□ -0.28
COL11A1-207ENST00000465209 DCP1AQ9NPI6 582 aaPredicted RBP13.29□□□□□ -0.28
COL11A1-207ENST00000465209 STXBP5LQ9Y2K9 1186 aa13.29□□□□□ -0.28
COL11A1-207ENST00000465209 SMCHD1A6NHR9 2005 aa13.29□□□□□ -0.28
COL11A1-207ENST00000465209 DNM1LO00429 736 aa13.28□□□□□ -0.28
COL11A1-207ENST00000465209 DLL1O00548 723 aa13.28□□□□□ -0.28
COL11A1-207ENST00000465209 MSCO60682 206 aa13.28□□□□□ -0.28
COL11A1-207ENST00000465209 GLRX3O76003 335 aaKnown RBP13.28□□□□□ -0.28
COL11A1-207ENST00000465209 MDM2Q00987 491 aaPredicted RBP13.28□□□□□ -0.28
COL11A1-207ENST00000465209 OLFML2BQ68BL8 750 aa13.28□□□□□ -0.28
COL11A1-207ENST00000465209 LCORLQ8N3X6 602 aa13.28□□□□□ -0.28
COL11A1-207ENST00000465209 SDR42E1Q8WUS8 393 aa13.28□□□□□ -0.28
COL11A1-207ENST00000465209 SENP6Q9GZR1 1112 aaPredicted RBP13.28□□□□□ -0.28
COL11A1-207ENST00000465209 IL1RAPL2Q9NP60 686 aa13.28□□□□□ -0.28
COL11A1-207ENST00000465209 CABP5Q9NP86 173 aa13.28□□□□□ -0.28
COL11A1-207ENST00000465209 ZNF532Q9HCE3 1301 aa13.28□□□□□ -0.28
COL11A1-207ENST00000465209 POTEB2H3BUK9 544 aa13.27□□□□□ -0.29
COL11A1-207ENST00000465209 SMIM22K7EJ46 135 aa13.27□□□□□ -0.29
COL11A1-207ENST00000465209 COBLO75128 1261 aa13.27□□□□□ -0.29
COL11A1-207ENST00000465209 CYP2D6P10635 497 aa13.27□□□□□ -0.29
COL11A1-207ENST00000465209 ADORA2AP29274 412 aa13.27□□□□□ -0.29
COL11A1-207ENST00000465209 COG2Q14746 738 aa13.27□□□□□ -0.29
COL11A1-207ENST00000465209 SNX17Q15036 470 aa13.27□□□□□ -0.29
COL11A1-207ENST00000465209 TTF1Q15361 905 aaPredicted RBP13.27□□□□□ -0.29
COL11A1-207ENST00000465209 SLC9C2Q5TAH2 1124 aa13.27□□□□□ -0.29
COL11A1-207ENST00000465209 WDR78Q5VTH9 848 aa13.27□□□□□ -0.29
COL11A1-207ENST00000465209 CLEC10AQ8IUN9 316 aa13.27□□□□□ -0.29
COL11A1-207ENST00000465209 SIRT2Q8IXJ6 389 aa13.27□□□□□ -0.29
COL11A1-207ENST00000465209 SHCBP1Q8NEM2 672 aa13.27□□□□□ -0.29
COL11A1-207ENST00000465209 PANK1Q8TE04 598 aa13.27□□□□□ -0.29
COL11A1-207ENST00000465209 CRNKL1Q9BZJ0 848 aaKnown RBP13.27□□□□□ -0.29
COL11A1-207ENST00000465209 SPATC1LQ9H0A9 340 aa13.27□□□□□ -0.29
COL11A1-207ENST00000465209 MCM9Q9NXL9 1143 aa13.27□□□□□ -0.29
COL11A1-207ENST00000465209 IVNS1ABPQ9Y6Y0 642 aa13.27□□□□□ -0.29
COL11A1-207ENST00000465209 POLR3DP05423 398 aaPredicted RBP13.26□□□□□ -0.29
COL11A1-207ENST00000465209 ERCC3P19447 782 aa13.26□□□□□ -0.29
COL11A1-207ENST00000465209 ATP2B2Q01814 1243 aa13.26□□□□□ -0.29
COL11A1-207ENST00000465209 SLFNL1Q499Z3 407 aa13.26□□□□□ -0.29
COL11A1-207ENST00000465209 TMEM179Q6ZVK1 233 aa13.26□□□□□ -0.29
COL11A1-207ENST00000465209 GUCD1Q96NT3 240 aa13.26□□□□□ -0.29
COL11A1-207ENST00000465209 CWC22Q9HCG8 908 aaKnown RBP13.26□□□□□ -0.29
COL11A1-207ENST00000465209 ZBED9Q6R2W3 1325 aa13.25□□□□□ -0.29
COL11A1-207ENST00000465209 GOLIM4O00461 696 aa13.25□□□□□ -0.29
COL11A1-207ENST00000465209 STRNO43815 780 aa13.25□□□□□ -0.29
COL11A1-207ENST00000465209 CHGBP05060 677 aa13.25□□□□□ -0.29
COL11A1-207ENST00000465209 AKR1B1P15121 316 aa13.25□□□□□ -0.29
COL11A1-207ENST00000465209 DSG3P32926 999 aa13.25□□□□□ -0.29
COL11A1-207ENST00000465209 ATN1P54259 1190 aaPredicted RBP13.25□□□□□ -0.29
COL11A1-207ENST00000465209 RTP1P59025 263 aa13.25□□□□□ -0.29
COL11A1-207ENST00000465209 HNRNPUQ00839 825 aaKnown RBP eCLIP13.25□□□□□ -0.29
COL11A1-207ENST00000465209 FAM109BQ6ICB4 259 aaPredicted RBP13.25□□□□□ -0.29
COL11A1-207ENST00000465209 DYNLL2Q96FJ2 89 aa13.25□□□□□ -0.29
COL11A1-207ENST00000465209 SWAP70Q9UH65 585 aa13.25□□□□□ -0.29
COL11A1-207ENST00000465209 TMX2Q9Y320 296 aa13.25□□□□□ -0.29
COL11A1-207ENST00000465209 ROBO3Q96MS0 1386 aa13.24□□□□□ -0.29
COL11A1-207ENST00000465209 SEPT4O43236 478 aa13.24□□□□□ -0.29
COL11A1-207ENST00000465209 PRKAB2O43741 272 aa13.24□□□□□ -0.29
COL11A1-207ENST00000465209 ADD2P35612 726 aa13.24□□□□□ -0.29
COL11A1-207ENST00000465209 HSP90AB4PQ58FF6 505 aa13.24□□□□□ -0.29
COL11A1-207ENST00000465209 GJC2Q5T442 439 aaPredicted RBP13.24□□□□□ -0.29
COL11A1-207ENST00000465209 ABRAQ8N0Z2 381 aa13.24□□□□□ -0.29
COL11A1-207ENST00000465209 MB21D1Q8N884 522 aa13.24□□□□□ -0.29
COL11A1-207ENST00000465209 ATG4CQ96DT6 458 aa13.24□□□□□ -0.29
COL11A1-207ENST00000465209 KIF1BPQ96EK5 621 aa13.24□□□□□ -0.29
COL11A1-207ENST00000465209 DNAJC2Q99543 621 aaKnown RBP13.24□□□□□ -0.29
COL11A1-207ENST00000465209 TANGO6Q9C0B7 1094 aa13.24□□□□□ -0.29
COL11A1-207ENST00000465209 VCPKMTQ9H867 229 aa13.24□□□□□ -0.29
COL11A1-207ENST00000465209 ARMT1Q9H993 441 aa13.24□□□□□ -0.29
COL11A1-207ENST00000465209 HOXC10Q9NYD6 342 aa13.24□□□□□ -0.29
COL11A1-207ENST00000465209 ADAMTS5Q9UNA0 930 aa13.24□□□□□ -0.29
COL11A1-207ENST00000465209 MPHOSPH10O00566 681 aaKnown RBP13.23□□□□□ -0.29
COL11A1-207ENST00000465209 CNGA1P29973 690 aa13.23□□□□□ -0.29
COL11A1-207ENST00000465209 ICA1Q05084 483 aa13.23□□□□□ -0.29
COL11A1-207ENST00000465209 DPP9Q86TI2 863 aa13.23□□□□□ -0.29
COL11A1-207ENST00000465209 CLASRPQ8N2M8 674 aaKnown RBP13.23□□□□□ -0.29
COL11A1-207ENST00000465209 MAML3Q96JK9 1138 aa13.23□□□□□ -0.29
COL11A1-207ENST00000465209 ZBTB40Q9NUA8 1239 aa13.23□□□□□ -0.29
COL11A1-207ENST00000465209 CYP2D7A0A087X1C5 515 aa13.22□□□□□ -0.29
COL11A1-207ENST00000465209 WDR46O15213 610 aaKnown RBP13.22□□□□□ -0.29
COL11A1-207ENST00000465209 MBD4O95243 580 aa13.22□□□□□ -0.29
COL11A1-207ENST00000465209 TMEM132BQ14DG7 1078 aa13.22□□□□□ -0.29
COL11A1-207ENST00000465209 FAM47AQ5JRC9 791 aa13.22□□□□□ -0.29
COL11A1-207ENST00000465209 C12orf60Q5U649 245 aa13.22□□□□□ -0.29
COL11A1-207ENST00000465209 C1orf53Q5VUE5 145 aa13.22□□□□□ -0.29
COL11A1-207ENST00000465209 ANO1Q5XXA6 986 aa13.22□□□□□ -0.29
COL11A1-207ENST00000465209 SLC39A5Q6ZMH5 540 aa13.22□□□□□ -0.29
COL11A1-207ENST00000465209 C16orf86Q6ZW13 317 aa13.22□□□□□ -0.29
COL11A1-207ENST00000465209 SPICE1Q8N0Z3 855 aa13.22□□□□□ -0.29
COL11A1-207ENST00000465209 REPS2Q8NFH8 660 aa13.22□□□□□ -0.29
COL11A1-207ENST00000465209 MROH8Q9H579 483 aa13.22□□□□□ -0.29
COL11A1-207ENST00000465209 PDLIM7Q9NR12 457 aa13.22□□□□□ -0.29
COL11A1-207ENST00000465209 ATP8A2Q9NTI2 1148 aa13.22□□□□□ -0.29
COL11A1-207ENST00000465209 PAG1Q9NWQ8 432 aa13.22□□□□□ -0.29
COL11A1-207ENST00000465209 MYH4Q9Y623 1939 aa13.21□□□□□ -0.29
COL11A1-207ENST00000465209 FLOT1O75955 427 aa13.21□□□□□ -0.29
COL11A1-207ENST00000465209 ATP5JP18859 108 aa13.21□□□□□ -0.29
COL11A1-207ENST00000465209 CDK8P49336 464 aa13.21□□□□□ -0.29
COL11A1-207ENST00000465209 LRRC41Q15345 812 aa13.21□□□□□ -0.29
COL11A1-207ENST00000465209 TRIM60Q495X7 471 aa13.21□□□□□ -0.29
COL11A1-207ENST00000465209 PRAMEF19Q5SWL8 479 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms