RNA–Protein interactions for RNA: ENST00000463631.1

HMGN1-209, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 583 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-209ENST00000463631 POLR3DP05423 398 aaPredicted RBP20.97■□□□□ 0.95
HMGN1-209ENST00000463631 PDE6AP16499 860 aa20.97■□□□□ 0.95
HMGN1-209ENST00000463631 MB21D1Q8N884 522 aa20.97■□□□□ 0.95
HMGN1-209ENST00000463631 HOXC10Q9NYD6 342 aa20.97■□□□□ 0.95
HMGN1-209ENST00000463631 EXOC6BQ9Y2D4 811 aa20.97■□□□□ 0.95
HMGN1-209ENST00000463631 POTEB2H3BUK9 544 aa20.96■□□□□ 0.95
HMGN1-209ENST00000463631 ADORA2AP29274 412 aa20.96■□□□□ 0.95
HMGN1-209ENST00000463631 CNGA1P29973 690 aa20.96■□□□□ 0.95
HMGN1-209ENST00000463631 SPATC1LQ9H0A9 340 aa20.96■□□□□ 0.95
HMGN1-209ENST00000463631 MCM9Q9NXL9 1143 aa20.96■□□□□ 0.95
HMGN1-209ENST00000463631 RTP1P59025 263 aa20.95■□□□□ 0.94
HMGN1-209ENST00000463631 HSP90AB4PQ58FF6 505 aa20.95■□□□□ 0.94
HMGN1-209ENST00000463631 SLC9C2Q5TAH2 1124 aa20.95■□□□□ 0.94
HMGN1-209ENST00000463631 TMEM179Q6ZVK1 233 aa20.95■□□□□ 0.94
HMGN1-209ENST00000463631 DPP9Q86TI2 863 aa20.95■□□□□ 0.94
HMGN1-209ENST00000463631 ABRAQ8N0Z2 381 aa20.95■□□□□ 0.94
HMGN1-209ENST00000463631 ARRDC4Q8NCT1 418 aa20.95■□□□□ 0.94
HMGN1-209ENST00000463631 PPIL4Q8WUA2 492 aaKnown RBP eCLIP20.95■□□□□ 0.94
HMGN1-209ENST00000463631 TANGO6Q9C0B7 1094 aa20.95■□□□□ 0.94
HMGN1-209ENST00000463631 DCP1AQ9NPI6 582 aaPredicted RBP20.95■□□□□ 0.94
HMGN1-209ENST00000463631 EVX2Q03828 476 aa20.94■□□□□ 0.94
HMGN1-209ENST00000463631 SNX17Q15036 470 aa20.94■□□□□ 0.94
HMGN1-209ENST00000463631 MROH8Q9H579 483 aa20.94■□□□□ 0.94
HMGN1-209ENST00000463631 PRKAG2Q9UGJ0 569 aa20.94■□□□□ 0.94
HMGN1-209ENST00000463631 SWAP70Q9UH65 585 aa20.94■□□□□ 0.94
HMGN1-209ENST00000463631 TCRBV5S4A2TA0A5A2 114 aa20.93■□□□□ 0.94
HMGN1-209ENST00000463631 MPHOSPH10O00566 681 aaKnown RBP20.93■□□□□ 0.94
HMGN1-209ENST00000463631 SEPT4O43236 478 aa20.93■□□□□ 0.94
HMGN1-209ENST00000463631 ERCC3P19447 782 aa20.93■□□□□ 0.94
HMGN1-209ENST00000463631 ATN1P54259 1190 aaPredicted RBP20.93■□□□□ 0.94
HMGN1-209ENST00000463631 RHPN1Q8TCX5 695 aa20.93■□□□□ 0.94
HMGN1-209ENST00000463631 GUCD1Q96NT3 240 aa20.93■□□□□ 0.94
HMGN1-209ENST00000463631 SLC5A4Q9NY91 659 aa20.93■□□□□ 0.94
HMGN1-209ENST00000463631 ZNF532Q9HCE3 1301 aa20.93■□□□□ 0.94
HMGN1-209ENST00000463631 SDR42E1Q8WUS8 393 aa20.92■□□□□ 0.94
HMGN1-209ENST00000463631 SH2D4AQ9H788 454 aa20.92■□□□□ 0.94
HMGN1-209ENST00000463631 IL1RAPL2Q9NP60 686 aa20.92■□□□□ 0.94
HMGN1-209ENST00000463631 KBTBD13C9JR72 458 aa20.91■□□□□ 0.94
HMGN1-209ENST00000463631 COBLO75128 1261 aa20.91■□□□□ 0.94
HMGN1-209ENST00000463631 DSG3P32926 999 aa20.91■□□□□ 0.94
HMGN1-209ENST00000463631 KIAA1755Q5JYT7 1200 aa20.91■□□□□ 0.94
HMGN1-209ENST00000463631 GJC2Q5T442 439 aaPredicted RBP20.91■□□□□ 0.94
HMGN1-209ENST00000463631 C1orf53Q5VUE5 145 aa20.91■□□□□ 0.94
HMGN1-209ENST00000463631 LCORLQ8N3X6 602 aa20.91■□□□□ 0.94
HMGN1-209ENST00000463631 ROBO3Q96MS0 1386 aa20.91■□□□□ 0.94
HMGN1-209ENST00000463631 TMX2Q9Y320 296 aa20.91■□□□□ 0.94
HMGN1-209ENST00000463631 BAZ2AQ9UIF9 1905 aaKnown RBP20.9■□□□□ 0.94
HMGN1-209ENST00000463631 SLC39A5Q6ZMH5 540 aa20.9■□□□□ 0.94
HMGN1-209ENST00000463631 SIAH1Q8IUQ4 282 aa20.9■□□□□ 0.94
HMGN1-209ENST00000463631 CLASRPQ8N2M8 674 aaKnown RBP20.9■□□□□ 0.94
HMGN1-209ENST00000463631 SLC44A5Q8NCS7 719 aa20.9■□□□□ 0.94
HMGN1-209ENST00000463631 VCPKMTQ9H867 229 aa20.9■□□□□ 0.94
HMGN1-209ENST00000463631 ARHGEF10LQ9HCE6 1279 aa20.9■□□□□ 0.94
HMGN1-209ENST00000463631 NRBP1Q9UHY1 535 aa20.9■□□□□ 0.94
HMGN1-209ENST00000463631 ATP11BQ9Y2G3 1177 aa20.9■□□□□ 0.94
HMGN1-209ENST00000463631 COL11A1P12107 1806 aaPredicted RBP20.9■□□□□ 0.94
HMGN1-209ENST00000463631 GOLIM4O00461 696 aa20.89■□□□□ 0.93
HMGN1-209ENST00000463631 WDR46O15213 610 aaKnown RBP20.89■□□□□ 0.93
HMGN1-209ENST00000463631 FLOT1O75955 427 aa20.89■□□□□ 0.93
HMGN1-209ENST00000463631 CYP2D6P10635 497 aa20.89■□□□□ 0.93
HMGN1-209ENST00000463631 ICA1Q05084 483 aa20.89■□□□□ 0.93
HMGN1-209ENST00000463631 ATG4CQ96DT6 458 aa20.89■□□□□ 0.93
HMGN1-209ENST00000463631 KIF1BPQ96EK5 621 aa20.89■□□□□ 0.93
HMGN1-209ENST00000463631 MAML3Q96JK9 1138 aa20.89■□□□□ 0.93
HMGN1-209ENST00000463631 ATP8A2Q9NTI2 1148 aa20.89■□□□□ 0.93
HMGN1-209ENST00000463631 MYH7P12883 1935 aa20.88■□□□□ 0.93
HMGN1-209ENST00000463631 ZNFX1Q9P2E3 1918 aaKnown RBP20.88■□□□□ 0.93
HMGN1-209ENST00000463631 CCDC17Q96LX7 622 aa20.88■□□□□ 0.93
HMGN1-209ENST00000463631 ADAMTS5Q9UNA0 930 aa20.88■□□□□ 0.93
HMGN1-209ENST00000463631 TTC28Q96AY4 2481 aa20.88■□□□□ 0.93
HMGN1-209ENST00000463631 FCER1AP12319 257 aa20.87■□□□□ 0.93
HMGN1-209ENST00000463631 AKR1B1P15121 316 aa20.87■□□□□ 0.93
HMGN1-209ENST00000463631 LRRC41Q15345 812 aa20.87■□□□□ 0.93
HMGN1-209ENST00000463631 ZNF697Q5TEC3 545 aa20.87■□□□□ 0.93
HMGN1-209ENST00000463631 NCAPG2Q86XI2 1143 aa20.87■□□□□ 0.93
HMGN1-209ENST00000463631 CLEC10AQ8IUN9 316 aa20.87■□□□□ 0.93
HMGN1-209ENST00000463631 PHF6Q8IWS0 365 aaKnown RBP eCLIP20.87■□□□□ 0.93
HMGN1-209ENST00000463631 DYNLL2Q96FJ2 89 aa20.87■□□□□ 0.93
HMGN1-209ENST00000463631 DNAJC2Q99543 621 aaKnown RBP20.87■□□□□ 0.93
HMGN1-209ENST00000463631 ARMT1Q9H993 441 aa20.87■□□□□ 0.93
HMGN1-209ENST00000463631 PDLIM7Q9NR12 457 aa20.87■□□□□ 0.93
HMGN1-209ENST00000463631 PLXNA1Q9UIW2 1896 aa20.87■□□□□ 0.93
HMGN1-209ENST00000463631 GREB1LQ9C091 1923 aaPredicted RBP20.86■□□□□ 0.93
HMGN1-209ENST00000463631 SLC25A27O95847 323 aa20.86■□□□□ 0.93
HMGN1-209ENST00000463631 ADD2P35612 726 aa20.86■□□□□ 0.93
HMGN1-209ENST00000463631 HNRNPUQ00839 825 aaKnown RBP eCLIP20.86■□□□□ 0.93
HMGN1-209ENST00000463631 PLS1Q14651 629 aa20.86■□□□□ 0.93
HMGN1-209ENST00000463631 TRIM60Q495X7 471 aa20.86■□□□□ 0.93
HMGN1-209ENST00000463631 FAM47AQ5JRC9 791 aa20.86■□□□□ 0.93
HMGN1-209ENST00000463631 ANO1Q5XXA6 986 aa20.86■□□□□ 0.93
HMGN1-209ENST00000463631 SPICE1Q8N0Z3 855 aa20.86■□□□□ 0.93
HMGN1-209ENST00000463631 PANK1Q8TE04 598 aa20.86■□□□□ 0.93
HMGN1-209ENST00000463631 MBD4O95243 580 aa20.85■□□□□ 0.93
HMGN1-209ENST00000463631 IFIT2P09913 472 aaKnown RBP20.85■□□□□ 0.93
HMGN1-209ENST00000463631 ADCYAP1R1P41586 468 aa20.85■□□□□ 0.93
HMGN1-209ENST00000463631 TMEM132BQ14DG7 1078 aa20.85■□□□□ 0.93
HMGN1-209ENST00000463631 SHHQ15465 462 aa20.85■□□□□ 0.93
HMGN1-209ENST00000463631 C12orf60Q5U649 245 aa20.85■□□□□ 0.93
HMGN1-209ENST00000463631 RPAP2Q8IXW5 612 aaPredicted RBP20.85■□□□□ 0.93
HMGN1-209ENST00000463631 PAG1Q9NWQ8 432 aa20.85■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms