RNA–Protein interactions for RNA: ENST00000462658.1

UBE4B-204, Transcript of ubiquitination factor E4B, humanhuman

TSL 3

Gene UBE4B, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-204ENST00000462658 METTL5Q9NRN9 209 aaKnown RBP9.87□□□□□ -0.83
UBE4B-204ENST00000462658 TPSG1Q9NRR2 321 aa9.87□□□□□ -0.83
UBE4B-204ENST00000462658 PCDHA4Q9UN74 947 aa9.87□□□□□ -0.83
UBE4B-204ENST00000462658 TECPR2O15040 1411 aa9.87□□□□□ -0.83
UBE4B-204ENST00000462658 FAM135BQ49AJ0 1406 aa9.87□□□□□ -0.83
UBE4B-204ENST00000462658 CDK8P49336 464 aa9.86□□□□□ -0.83
UBE4B-204ENST00000462658 CNGB1Q14028 1251 aaPredicted RBP9.86□□□□□ -0.83
UBE4B-204ENST00000462658 DIP2AQ14689 1571 aa9.86□□□□□ -0.83
UBE4B-204ENST00000462658 ZNF394Q53GI3 561 aa9.86□□□□□ -0.83
UBE4B-204ENST00000462658 DYMQ7RTS9 669 aa9.86□□□□□ -0.83
UBE4B-204ENST00000462658 METTL16Q86W50 562 aaKnown RBP9.86□□□□□ -0.83
UBE4B-204ENST00000462658 XRN1Q8IZH2 1706 aaKnown RBP9.86□□□□□ -0.83
UBE4B-204ENST00000462658 C2CD4AQ8NCU7 369 aaPredicted RBP9.86□□□□□ -0.83
UBE4B-204ENST00000462658 JARID2Q92833 1246 aaPredicted RBP9.86□□□□□ -0.83
UBE4B-204ENST00000462658 TP53INP1Q96A56 240 aa9.86□□□□□ -0.83
UBE4B-204ENST00000462658 RHOVQ96L33 236 aa9.86□□□□□ -0.83
UBE4B-204ENST00000462658 CDK19Q9BWU1 502 aa9.86□□□□□ -0.83
UBE4B-204ENST00000462658 PCDHGC5Q9Y5F6 944 aa9.86□□□□□ -0.83
UBE4B-204ENST00000462658 PCDHGB7Q9Y5F8 929 aa9.86□□□□□ -0.83
UBE4B-204ENST00000462658 CSADQ9Y600 493 aa9.86□□□□□ -0.83
UBE4B-204ENST00000462658 PIK3R4Q99570 1358 aa9.86□□□□□ -0.83
UBE4B-204ENST00000462658 MSTNO14793 375 aa9.85□□□□□ -0.83
UBE4B-204ENST00000462658 TMPRSS2O15393 492 aa9.85□□□□□ -0.83
UBE4B-204ENST00000462658 SLFN14P0C7P3 912 aa9.85□□□□□ -0.83
UBE4B-204ENST00000462658 CAMK2GQ13555 558 aaPredicted RBP9.85□□□□□ -0.83
UBE4B-204ENST00000462658 ARMC10Q8N2F6 343 aa9.85□□□□□ -0.83
UBE4B-204ENST00000462658 MIR1-1HGQ9H1L0 117 aa9.85□□□□□ -0.83
UBE4B-204ENST00000462658 SLC12A5Q9H2X9 1139 aa9.85□□□□□ -0.83
UBE4B-204ENST00000462658 KNSTRNQ9Y448 316 aa9.85□□□□□ -0.83
UBE4B-204ENST00000462658 ACTL7BQ9Y614 415 aa9.85□□□□□ -0.83
UBE4B-204ENST00000462658 TULP4Q9NRJ4 1543 aa9.85□□□□□ -0.83
UBE4B-204ENST00000462658 ROBO2Q9HCK4 1378 aa9.85□□□□□ -0.83
UBE4B-204ENST00000462658 GAS2O43903 313 aaKnown RBP9.84□□□□□ -0.83
UBE4B-204ENST00000462658 ID3Q02535 119 aa9.84□□□□□ -0.83
UBE4B-204ENST00000462658 PWP1Q13610 501 aa9.84□□□□□ -0.83
UBE4B-204ENST00000462658 INPP5AQ14642 412 aa9.84□□□□□ -0.83
UBE4B-204ENST00000462658 BNC2Q6ZN30 1099 aaPredicted RBP9.84□□□□□ -0.83
UBE4B-204ENST00000462658 UTP4Q969X6 686 aaKnown RBP9.84□□□□□ -0.83
UBE4B-204ENST00000462658 KNDC1Q76NI1 1749 aa9.83□□□□□ -0.84
UBE4B-204ENST00000462658 DCDC2CA8MYV0 355 aa9.83□□□□□ -0.84
UBE4B-204ENST00000462658 LMNB2Q03252 620 aa9.83□□□□□ -0.84
UBE4B-204ENST00000462658 RALBP1Q15311 655 aa9.83□□□□□ -0.84
UBE4B-204ENST00000462658 USP48Q86UV5 1035 aa9.83□□□□□ -0.84
UBE4B-204ENST00000462658 C12orf40Q86WS4 652 aa9.83□□□□□ -0.84
UBE4B-204ENST00000462658 TRIM42Q8IWZ5 723 aa9.83□□□□□ -0.84
UBE4B-204ENST00000462658 CRIM1Q9NZV1 1036 aa9.83□□□□□ -0.84
UBE4B-204ENST00000462658 BMP3P12645 472 aa9.82□□□□□ -0.84
UBE4B-204ENST00000462658 KCNA6P17658 529 aa9.82□□□□□ -0.84
UBE4B-204ENST00000462658 SGO2Q562F6 1265 aa9.82□□□□□ -0.84
UBE4B-204ENST00000462658 ZC3H12AQ5D1E8 599 aaKnown RBP9.82□□□□□ -0.84
UBE4B-204ENST00000462658 CC2D1BQ5T0F9 858 aaKnown RBP9.82□□□□□ -0.84
UBE4B-204ENST00000462658 CDPF1Q6NVV7 123 aa9.82□□□□□ -0.84
UBE4B-204ENST00000462658 LRFN4Q6PJG9 635 aa9.82□□□□□ -0.84
UBE4B-204ENST00000462658 MYRFLQ96LU7 910 aa9.82□□□□□ -0.84
UBE4B-204ENST00000462658 FANCD2OSQ96PS1 177 aa9.82□□□□□ -0.84
UBE4B-204ENST00000462658 FAM105AQ9NUU6 356 aa9.82□□□□□ -0.84
UBE4B-204ENST00000462658 ADAMTS1Q9UHI8 967 aa9.82□□□□□ -0.84
UBE4B-204ENST00000462658 TMEM94Q12767 1356 aa9.82□□□□□ -0.84
UBE4B-204ENST00000462658 KTN1Q86UP2 1357 aaKnown RBP9.82□□□□□ -0.84
UBE4B-204ENST00000462658 NKTRP30414 1462 aaKnown RBP9.82□□□□□ -0.84
UBE4B-204ENST00000462658 PTCH1Q13635 1447 aa9.82□□□□□ -0.84
UBE4B-204ENST00000462658 NINLQ9Y2I6 1382 aa9.81□□□□□ -0.84
UBE4B-204ENST00000462658 F13A1P00488 732 aa9.81□□□□□ -0.84
UBE4B-204ENST00000462658 TCF3P15923 654 aa9.81□□□□□ -0.84
UBE4B-204ENST00000462658 GARTP22102 1010 aa9.81□□□□□ -0.84
UBE4B-204ENST00000462658 EIF4A3P38919 411 aaKnown RBP9.81□□□□□ -0.84
UBE4B-204ENST00000462658 ASPAP45381 313 aa9.81□□□□□ -0.84
UBE4B-204ENST00000462658 USP11P51784 963 aa9.81□□□□□ -0.84
UBE4B-204ENST00000462658 RACK1P63244 317 aaKnown RBP9.81□□□□□ -0.84
UBE4B-204ENST00000462658 HNRNPUQ00839 825 aaKnown RBP eCLIP9.81□□□□□ -0.84
UBE4B-204ENST00000462658 SNAP47Q5SQN1 464 aa9.81□□□□□ -0.84
UBE4B-204ENST00000462658 SCARA3Q6AZY7 606 aa9.81□□□□□ -0.84
UBE4B-204ENST00000462658 FBXL19Q6PCT2 694 aa9.81□□□□□ -0.84
UBE4B-204ENST00000462658 PPP1R3FQ6ZSY5 799 aaPredicted RBP9.81□□□□□ -0.84
UBE4B-204ENST00000462658 NT5DC4Q86YG4 428 aa9.81□□□□□ -0.84
UBE4B-204ENST00000462658 GOLM1Q8NBJ4 401 aa9.81□□□□□ -0.84
UBE4B-204ENST00000462658 FBLIM1Q8WUP2 373 aa9.81□□□□□ -0.84
UBE4B-204ENST00000462658 PLPPR2Q96GM1 343 aa9.81□□□□□ -0.84
UBE4B-204ENST00000462658 YTHDC1Q96MU7 727 aaKnown RBP9.81□□□□□ -0.84
UBE4B-204ENST00000462658 DISC1Q9NRI5 854 aa9.81□□□□□ -0.84
UBE4B-204ENST00000462658 SYNGAP1Q96PV0 1343 aa9.81□□□□□ -0.84
UBE4B-204ENST00000462658 MYOM1P52179 1685 aa9.8□□□□□ -0.84
UBE4B-204ENST00000462658 RAB6AP20340 208 aa9.8□□□□□ -0.84
UBE4B-204ENST00000462658 PPM1JQ5JR12 505 aa9.8□□□□□ -0.84
UBE4B-204ENST00000462658 WIPI1Q5MNZ9 446 aaPredicted RBP9.8□□□□□ -0.84
UBE4B-204ENST00000462658 ELMO3Q96BJ8 720 aa9.8□□□□□ -0.84
UBE4B-204ENST00000462658 SIPA1L2Q9P2F8 1722 aaPredicted RBP9.79□□□□□ -0.84
UBE4B-204ENST00000462658 TTLL4Q14679 1199 aa9.79□□□□□ -0.84
UBE4B-204ENST00000462658 UVSSAQ2YD98 709 aa9.79□□□□□ -0.84
UBE4B-204ENST00000462658 CCDC184Q52MB2 194 aa9.79□□□□□ -0.84
UBE4B-204ENST00000462658 FAM20CQ8IXL6 584 aa9.79□□□□□ -0.84
UBE4B-204ENST00000462658 FBXO27Q8NI29 283 aa9.79□□□□□ -0.84
UBE4B-204ENST00000462658 ZNF296Q8WUU4 475 aaPredicted RBP9.79□□□□□ -0.84
UBE4B-204ENST00000462658 KCNF1Q9H3M0 494 aa9.79□□□□□ -0.84
UBE4B-204ENST00000462658 GSX1Q9H4S2 264 aaPredicted RBP9.79□□□□□ -0.84
UBE4B-204ENST00000462658 TERF2IPQ9NYB0 399 aa9.79□□□□□ -0.84
UBE4B-204ENST00000462658 HIF3AQ9Y2N7 669 aa9.79□□□□□ -0.84
UBE4B-204ENST00000462658 MYBBP1AQ9BQG0 1328 aaKnown RBP9.79□□□□□ -0.84
UBE4B-204ENST00000462658 NALCNQ8IZF0 1738 aa9.79□□□□□ -0.84
UBE4B-204ENST00000462658 ANKRD36BQ8N2N9 1353 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms