RNA–Protein interactions for RNA: ENST00000460715.2

TROVE2-209, Transcript of TROVE domain family member 2, humanhuman

TSL 3

Gene TROVE2, Length 1,474 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROVE2-209ENST00000460715 SHTN1A0MZ66 631 aa17.51■□□□□ 0.39
TROVE2-209ENST00000460715 MPHOSPH10O00566 681 aaKnown RBP17.51■□□□□ 0.39
TROVE2-209ENST00000460715 XBP1P17861 261 aa17.51■□□□□ 0.39
TROVE2-209ENST00000460715 KIF23Q02241 960 aaPredicted RBP17.51■□□□□ 0.39
TROVE2-209ENST00000460715 NBPF9Q3BBW0 867 aa17.51■□□□□ 0.39
TROVE2-209ENST00000460715 OTUD7BQ6GQQ9 843 aa17.51■□□□□ 0.39
TROVE2-209ENST00000460715 TMEM179Q6ZVK1 233 aa17.51■□□□□ 0.39
TROVE2-209ENST00000460715 USP48Q86UV5 1035 aa17.51■□□□□ 0.39
TROVE2-209ENST00000460715 CMTR1Q8N1G2 835 aaKnown RBP17.51■□□□□ 0.39
TROVE2-209ENST00000460715 CCDC82Q8N4S0 544 aa17.51■□□□□ 0.39
TROVE2-209ENST00000460715 ZNF396Q96N95 335 aaPredicted RBP17.51■□□□□ 0.39
TROVE2-209ENST00000460715 MAD2L2Q9UI95 211 aa17.51■□□□□ 0.39
TROVE2-209ENST00000460715 CNOT7Q9UIV1 285 aaKnown RBP17.51■□□□□ 0.39
TROVE2-209ENST00000460715 DDX49Q9Y6V7 483 aaKnown RBP17.51■□□□□ 0.39
TROVE2-209ENST00000460715 ELP1O95163 1332 aa17.51■□□□□ 0.39
TROVE2-209ENST00000460715 PALM3A6NDB9 673 aaPredicted RBP17.5■□□□□ 0.39
TROVE2-209ENST00000460715 FAM196BA6NMK8 535 aa17.5■□□□□ 0.39
TROVE2-209ENST00000460715 PARP1P09874 1014 aaKnown RBP17.5■□□□□ 0.39
TROVE2-209ENST00000460715 GUCY1A2P33402 732 aa17.5■□□□□ 0.39
TROVE2-209ENST00000460715 GPC2Q8N158 579 aa17.5■□□□□ 0.39
TROVE2-209ENST00000460715 KANSL2Q9H9L4 492 aa17.5■□□□□ 0.39
TROVE2-209ENST00000460715 GDPD2Q9HCC8 539 aa17.5■□□□□ 0.39
TROVE2-209ENST00000460715 CFAP45Q9UL16 551 aa17.5■□□□□ 0.39
TROVE2-209ENST00000460715 TBC1D12O60347 775 aa17.5■□□□□ 0.39
TROVE2-209ENST00000460715 SAFBQ15424 915 aaKnown RBP eCLIP17.5■□□□□ 0.39
TROVE2-209ENST00000460715 PKN1Q16512 942 aa17.5■□□□□ 0.39
TROVE2-209ENST00000460715 ABCB5Q2M3G0 1257 aa17.5■□□□□ 0.39
TROVE2-209ENST00000460715 KIF4BQ2VIQ3 1234 aa17.5■□□□□ 0.39
TROVE2-209ENST00000460715 FAM173BQ6P4H8 233 aa17.5■□□□□ 0.39
TROVE2-209ENST00000460715 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.5■□□□□ 0.39
TROVE2-209ENST00000460715 GJB4Q9NTQ9 266 aa17.5■□□□□ 0.39
TROVE2-209ENST00000460715 NYAP2Q9P242 653 aa17.5■□□□□ 0.39
TROVE2-209ENST00000460715 V9GY48 417 aaPredicted RBP17.5■□□□□ 0.39
TROVE2-209ENST00000460715 UBE2Q2LH0YL09 131 aa17.49■□□□□ 0.39
TROVE2-209ENST00000460715 H7C1D1 291 aa17.49■□□□□ 0.39
TROVE2-209ENST00000460715 MMP1P03956 469 aa17.49■□□□□ 0.39
TROVE2-209ENST00000460715 SMARCA1P28370 1054 aa17.49■□□□□ 0.39
TROVE2-209ENST00000460715 ASPRV1Q53RT3 343 aa17.49■□□□□ 0.39
TROVE2-209ENST00000460715 SPZ1Q9BXG8 430 aa17.49■□□□□ 0.39
TROVE2-209ENST00000460715 CLIP2Q9UDT6 1046 aa17.49■□□□□ 0.39
TROVE2-209ENST00000460715 SLURP2P0DP57 97 aa17.48■□□□□ 0.39
TROVE2-209ENST00000460715 SNHG28P0DPA3 235 aa17.48■□□□□ 0.39
TROVE2-209ENST00000460715 PDHBP11177 359 aa17.48■□□□□ 0.39
TROVE2-209ENST00000460715 SCG2P13521 617 aa17.48■□□□□ 0.39
TROVE2-209ENST00000460715 UBE2HP62256 183 aa17.48■□□□□ 0.39
TROVE2-209ENST00000460715 GNL2Q13823 731 aaKnown RBP17.48■□□□□ 0.39
TROVE2-209ENST00000460715 PFKFB3Q16875 520 aaPredicted RBP17.48■□□□□ 0.39
TROVE2-209ENST00000460715 RBM26Q5T8P6 1007 aaKnown RBP17.48■□□□□ 0.39
TROVE2-209ENST00000460715 FAM177A1Q8N128 213 aaPredicted RBP17.48■□□□□ 0.39
TROVE2-209ENST00000460715 LRRC47Q8N1G4 583 aaKnown RBP17.48■□□□□ 0.39
TROVE2-209ENST00000460715 STAG2Q8N3U4 1231 aa17.48■□□□□ 0.39
TROVE2-209ENST00000460715 SPATA32Q96LK8 384 aa17.48■□□□□ 0.39
TROVE2-209ENST00000460715 TMEM39BQ9GZU3 492 aa17.48■□□□□ 0.39
TROVE2-209ENST00000460715 CABP5Q9NP86 173 aa17.48■□□□□ 0.39
TROVE2-209ENST00000460715 GPRC5DQ9NZD1 345 aa17.48■□□□□ 0.39
TROVE2-209ENST00000460715 KIF28PB7ZC32 967 aa17.47■□□□□ 0.39
TROVE2-209ENST00000460715 KLRF2D3W0D1 207 aa17.47■□□□□ 0.39
TROVE2-209ENST00000460715 EGFRP00533 1210 aa17.47■□□□□ 0.39
TROVE2-209ENST00000460715 YBX3P16989 372 aaKnown RBP eCLIP17.47■□□□□ 0.391e-7■□□□□ 9.9
TROVE2-209ENST00000460715 U2AF2P26368 475 aaKnown RBP eCLIP17.47■□□□□ 0.39
TROVE2-209ENST00000460715 ICA1Q05084 483 aa17.47■□□□□ 0.39
TROVE2-209ENST00000460715 TBC1D10BQ4KMP7 808 aaPredicted RBP17.47■□□□□ 0.39
TROVE2-209ENST00000460715 SAMD7Q7Z3H4 446 aa17.47■□□□□ 0.39
TROVE2-209ENST00000460715 CLEC10AQ8IUN9 316 aa17.47■□□□□ 0.39
TROVE2-209ENST00000460715 LEO1Q8WVC0 666 aaPredicted RBP17.47■□□□□ 0.39
TROVE2-209ENST00000460715 MKL1Q969V6 931 aa17.47■□□□□ 0.39
TROVE2-209ENST00000460715 FOXP1Q9H334 677 aaPredicted RBP17.47■□□□□ 0.39
TROVE2-209ENST00000460715 PGAP2Q9UHJ9 254 aa17.47■□□□□ 0.39
TROVE2-209ENST00000460715 SYNPO2Q9UMS6 1093 aa17.47■□□□□ 0.39
TROVE2-209ENST00000460715 MTMR7Q9Y216 660 aa17.47■□□□□ 0.39
TROVE2-209ENST00000460715 GOLGB1Q14789 3259 aaKnown RBP17.46■□□□□ 0.39
TROVE2-209ENST00000460715 GDF11O95390 407 aa17.46■□□□□ 0.39
TROVE2-209ENST00000460715 SEPT2Q15019 361 aa17.46■□□□□ 0.39
TROVE2-209ENST00000460715 MYSM1Q5VVJ2 828 aa17.46■□□□□ 0.39
TROVE2-209ENST00000460715 GPT2Q8TD30 523 aa17.46■□□□□ 0.39
TROVE2-209ENST00000460715 SH3GLB2Q9NR46 395 aa17.46■□□□□ 0.39
TROVE2-209ENST00000460715 RNF181Q9P0P0 153 aa17.46■□□□□ 0.39
TROVE2-209ENST00000460715 TFIP11Q9UBB9 837 aaKnown RBP17.46■□□□□ 0.39
TROVE2-209ENST00000460715 USP17L5A8MUK1 530 aa17.45■□□□□ 0.38
TROVE2-209ENST00000460715 ATP2B2Q01814 1243 aa17.45■□□□□ 0.38
TROVE2-209ENST00000460715 MAP3K10Q02779 954 aa17.45■□□□□ 0.38
TROVE2-209ENST00000460715 RASA3Q14644 834 aa17.45■□□□□ 0.38
TROVE2-209ENST00000460715 GPATCH4Q5T3I0 446 aaKnown RBP17.45■□□□□ 0.38
TROVE2-209ENST00000460715 USP17L2Q6R6M4 530 aa17.45■□□□□ 0.38
TROVE2-209ENST00000460715 DIS3L2Q8IYB7 885 aaKnown RBP17.45■□□□□ 0.38
TROVE2-209ENST00000460715 PHF20Q9BVI0 1012 aa17.45■□□□□ 0.38
TROVE2-209ENST00000460715 BRMS1Q9HCU9 246 aa17.45■□□□□ 0.38
TROVE2-209ENST00000460715 VPS54Q9P1Q0 977 aa17.45■□□□□ 0.38
TROVE2-209ENST00000460715 BAZ2BQ9UIF8 2168 aaKnown RBP17.45■□□□□ 0.38
TROVE2-209ENST00000460715 hCG_1642624A0A1W2PR95 340 aa17.44■□□□□ 0.38
TROVE2-209ENST00000460715 GH2P01242 217 aa17.44■□□□□ 0.38
TROVE2-209ENST00000460715 GOLGA8HP0CJ92 632 aa17.44■□□□□ 0.38
TROVE2-209ENST00000460715 EEF2P13639 858 aaKnown RBP17.44■□□□□ 0.38
TROVE2-209ENST00000460715 ZNF543Q08ER8 600 aa17.44■□□□□ 0.38
TROVE2-209ENST00000460715 SLC35G1Q2M3R5 365 aa17.44■□□□□ 0.38
TROVE2-209ENST00000460715 APOBEC3FQ8IUX4 373 aaKnown RBP17.44■□□□□ 0.38
TROVE2-209ENST00000460715 NOSTRINQ8IVI9 506 aa17.44■□□□□ 0.38
TROVE2-209ENST00000460715 DCAF4Q8WV16 495 aa17.44■□□□□ 0.38
TROVE2-209ENST00000460715 USP28Q96RU2 1077 aa17.44■□□□□ 0.38
TROVE2-209ENST00000460715 RTEL1Q9NZ71 1219 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms