RNA–Protein interactions for RNA: ENST00000460160.5

HOXB3-202, Transcript of homeobox B3, humanhuman

TSL 5 BASIC

Gene HOXB3, Length 1,525 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-202ENST00000460160 FOXP2O15409 715 aa28.28■■■□□ 2.12
HOXB3-202ENST00000460160 CNMDO75829 334 aa28.28■■■□□ 2.12
HOXB3-202ENST00000460160 LBX2Q6XYB7 198 aa28.28■■■□□ 2.12
HOXB3-202ENST00000460160 PLEKHM2Q8IWE5 1019 aa28.28■■■□□ 2.12
HOXB3-202ENST00000460160 PXYLP1Q8TE99 480 aa28.28■■■□□ 2.12
HOXB3-202ENST00000460160 SH2D4AQ9H788 454 aa28.28■■■□□ 2.12
HOXB3-202ENST00000460160 KANSL2Q9H9L4 492 aa28.28■■■□□ 2.12
HOXB3-202ENST00000460160 BIN2Q9UBW5 565 aaPredicted RBP28.28■■■□□ 2.12
HOXB3-202ENST00000460160 PARP14Q460N5 1801 aa28.28■■■□□ 2.12
HOXB3-202ENST00000460160 SPDYE16A6NNV3 312 aaPredicted RBP28.28■■■□□ 2.12
HOXB3-202ENST00000460160 EEF2P13639 858 aaKnown RBP28.28■■■□□ 2.12
HOXB3-202ENST00000460160 LPAR1Q92633 364 aa28.28■■■□□ 2.12
HOXB3-202ENST00000460160 PORCNQ9H237 461 aa28.28■■■□□ 2.12
HOXB3-202ENST00000460160 MKNK2Q9HBH9 465 aa28.28■■■□□ 2.12
HOXB3-202ENST00000460160 VCPKMTQ9H867 229 aa28.27■■■□□ 2.12
HOXB3-202ENST00000460160 TICAM2Q86XR7 235 aa28.26■■■□□ 2.11
HOXB3-202ENST00000460160 SPICE1Q8N0Z3 855 aa28.26■■■□□ 2.11
HOXB3-202ENST00000460160 TANGO6Q9C0B7 1094 aa28.26■■■□□ 2.11
HOXB3-202ENST00000460160 NAPBQ9H115 298 aa28.26■■■□□ 2.11
HOXB3-202ENST00000460160 OSBPL3Q9H4L5 887 aa28.26■■■□□ 2.11
HOXB3-202ENST00000460160 CCL5P13501 91 aa28.25■■■□□ 2.11
HOXB3-202ENST00000460160 MAPK4P31152 587 aa28.25■■■□□ 2.11
HOXB3-202ENST00000460160 UBXN2AP68543 259 aa28.25■■■□□ 2.11
HOXB3-202ENST00000460160 ATP2B2Q01814 1243 aa28.25■■■□□ 2.11
HOXB3-202ENST00000460160 HELLSQ9NRZ9 838 aa28.25■■■□□ 2.11
HOXB3-202ENST00000460160 MYH4Q9Y623 1939 aa28.25■■■□□ 2.11
HOXB3-202ENST00000460160 A0A0G2JMZ2 1700 aa28.25■■■□□ 2.11
HOXB3-202ENST00000460160 A0A0D9SFI3 127 aa28.24■■■□□ 2.11
HOXB3-202ENST00000460160 PRDM1O75626 825 aa28.24■■■□□ 2.11
HOXB3-202ENST00000460160 COG2Q14746 738 aa28.24■■■□□ 2.11
HOXB3-202ENST00000460160 FAM227BQ96M60 508 aa28.24■■■□□ 2.11
HOXB3-202ENST00000460160 BTBD7Q9P203 1132 aa28.24■■■□□ 2.11
HOXB3-202ENST00000460160 CEP290O15078 2479 aa28.24■■■□□ 2.11
HOXB3-202ENST00000460160 TRIM6-TRIM34B2RNG4 842 aa28.23■■■□□ 2.11
HOXB3-202ENST00000460160 INHAP05111 366 aa28.23■■■□□ 2.11
HOXB3-202ENST00000460160 VPS53Q5VIR6 699 aa28.23■■■□□ 2.11
HOXB3-202ENST00000460160 PPARAQ07869 468 aa28.23■■■□□ 2.11
HOXB3-202ENST00000460160 ZNF287Q9HBT7 754 aa28.23■■■□□ 2.11
HOXB3-202ENST00000460160 HOXC10Q9NYD6 342 aa28.23■■■□□ 2.11
HOXB3-202ENST00000460160 WDR46O15213 610 aaKnown RBP28.22■■■□□ 2.11
HOXB3-202ENST00000460160 GPR142Q7Z601 462 aa28.22■■■□□ 2.11
HOXB3-202ENST00000460160 CCAR1Q8IX12 1150 aaKnown RBP28.22■■■□□ 2.11
HOXB3-202ENST00000460160 RILPL2Q969X0 211 aa28.22■■■□□ 2.11
HOXB3-202ENST00000460160 RNF208Q9H0X6 261 aa28.22■■■□□ 2.11
HOXB3-202ENST00000460160 UNC93B1Q9H1C4 597 aa28.22■■■□□ 2.11
HOXB3-202ENST00000460160 IGKV6D-41A0A0C4DH26 115 aa28.21■■■□□ 2.11
HOXB3-202ENST00000460160 CCNA1P78396 465 aa28.21■■■□□ 2.11
HOXB3-202ENST00000460160 PLEKHH3Q7Z736 793 aa28.21■■■□□ 2.11
HOXB3-202ENST00000460160 SOCS4Q8WXH5 440 aa28.21■■■□□ 2.11
HOXB3-202ENST00000460160 NUDT12Q9BQG2 462 aa28.21■■■□□ 2.11
HOXB3-202ENST00000460160 GJB1P08034 283 aa28.2■■■□□ 2.1
HOXB3-202ENST00000460160 NMIQ13287 307 aaPredicted RBP28.2■■■□□ 2.1
HOXB3-202ENST00000460160 MCMDC2Q4G0Z9 681 aa28.2■■■□□ 2.1
HOXB3-202ENST00000460160 ZNF444Q8N0Y2 327 aaPredicted RBP28.2■■■□□ 2.1
HOXB3-202ENST00000460160 SHISA4Q96DD7 197 aa28.2■■■□□ 2.1
HOXB3-202ENST00000460160 GOPCQ9HD26 462 aa28.2■■■□□ 2.1
HOXB3-202ENST00000460160 NYAP2Q9P242 653 aa28.2■■■□□ 2.1
HOXB3-202ENST00000460160 FLOT1O75955 427 aa28.19■■■□□ 2.1
HOXB3-202ENST00000460160 CYP2B6P20813 491 aa28.19■■■□□ 2.1
HOXB3-202ENST00000460160 PDE4BQ07343 736 aa28.19■■■□□ 2.1
HOXB3-202ENST00000460160 USP6NLQ92738 828 aa28.19■■■□□ 2.1
HOXB3-202ENST00000460160 COL11A1P12107 1806 aaPredicted RBP28.19■■■□□ 2.1
HOXB3-202ENST00000460160 HMGCRP04035 888 aa28.18■■■□□ 2.1
HOXB3-202ENST00000460160 SLC3A2P08195 630 aaKnown RBP28.18■■■□□ 2.1
HOXB3-202ENST00000460160 DSG3P32926 999 aa28.18■■■□□ 2.1
HOXB3-202ENST00000460160 MORN1Q5T089 497 aa28.18■■■□□ 2.1
HOXB3-202ENST00000460160 ZNF589Q86UQ0 364 aaPredicted RBP28.18■■■□□ 2.1
HOXB3-202ENST00000460160 PLIN4Q96Q06 1357 aa28.18■■■□□ 2.1
HOXB3-202ENST00000460160 XRCC5P13010 732 aaKnown RBP28.18■■■□□ 2.1
HOXB3-202ENST00000460160 GJA8P48165 433 aa28.18■■■□□ 2.1
HOXB3-202ENST00000460160 ALX1Q15699 326 aa28.18■■■□□ 2.1
HOXB3-202ENST00000460160 TRIB2Q92519 343 aa28.18■■■□□ 2.1
HOXB3-202ENST00000460160 ATG4CQ96DT6 458 aa28.17■■■□□ 2.1
HOXB3-202ENST00000460160 CEP95Q96GE4 821 aa28.17■■■□□ 2.1
HOXB3-202ENST00000460160 SDSP20132 328 aa28.16■■■□□ 2.1
HOXB3-202ENST00000460160 CTDSPL2Q05D32 466 aa28.16■■■□□ 2.1
HOXB3-202ENST00000460160 TRIM32Q13049 653 aa28.16■■■□□ 2.1
HOXB3-202ENST00000460160 MB21D1Q8N884 522 aa28.16■■■□□ 2.1
HOXB3-202ENST00000460160 NEDD1Q8NHV4 660 aa28.16■■■□□ 2.1
HOXB3-202ENST00000460160 NKX2-3Q8TAU0 364 aa28.16■■■□□ 2.1
HOXB3-202ENST00000460160 CWC22Q9HCG8 908 aaKnown RBP28.16■■■□□ 2.1
HOXB3-202ENST00000460160 FBXO28Q9NVF7 368 aa28.16■■■□□ 2.1
HOXB3-202ENST00000460160 MTMR4Q9NYA4 1195 aa28.16■■■□□ 2.1
HOXB3-202ENST00000460160 DDX52Q9Y2R4 599 aaKnown RBP eCLIP28.16■■■□□ 2.1
HOXB3-202ENST00000460160 RAD21O60216 631 aa28.15■■■□□ 2.1
HOXB3-202ENST00000460160 PDE4AP27815 886 aa28.15■■■□□ 2.1
HOXB3-202ENST00000460160 FAM47AQ5JRC9 791 aa28.15■■■□□ 2.1
HOXB3-202ENST00000460160 FAM83BQ5T0W9 1011 aa28.15■■■□□ 2.1
HOXB3-202ENST00000460160 WDR78Q5VTH9 848 aa28.15■■■□□ 2.1
HOXB3-202ENST00000460160 MOV10L1Q9BXT6 1211 aaKnown RBP28.15■■■□□ 2.1
HOXB3-202ENST00000460160 SPATC1LQ9H0A9 340 aa28.15■■■□□ 2.1
HOXB3-202ENST00000460160 PAK6Q9NQU5 681 aaPredicted RBP28.15■■■□□ 2.1
HOXB3-202ENST00000460160 CLIP2Q9UDT6 1046 aa28.15■■■□□ 2.1
HOXB3-202ENST00000460160 ANAPC4Q9UJX5 808 aa28.15■■■□□ 2.1
HOXB3-202ENST00000460160 TSPY3P0CV98 308 aa28.14■■■□□ 2.1
HOXB3-202ENST00000460160 TSPY8P0CW00 308 aa28.14■■■□□ 2.1
HOXB3-202ENST00000460160 HSPD1P10809 573 aaKnown RBP28.14■■■□□ 2.1
HOXB3-202ENST00000460160 RGS2P41220 211 aa28.14■■■□□ 2.1
HOXB3-202ENST00000460160 CCDC171Q6TFL3 1326 aa28.14■■■□□ 2.1
HOXB3-202ENST00000460160 U2AF1L4Q8WU68 220 aaKnown RBP28.14■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms