RNA–Protein interactions for RNA: ENST00000460110.5

NUDCD3-203, Transcript of NudC domain containing 3, humanhuman

TSL 1 (best)

Gene NUDCD3, Length 3,641 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-203ENST00000460110 SHROOM1Q2M3G4 852 aaPredicted RBP10.71□□□□□ -0.7
NUDCD3-203ENST00000460110 TMC4Q7Z404 712 aa10.71□□□□□ -0.7
NUDCD3-203ENST00000460110 COA7Q96BR5 231 aa10.71□□□□□ -0.7
NUDCD3-203ENST00000460110 PIGSQ96S52 555 aa10.71□□□□□ -0.7
NUDCD3-203ENST00000460110 BIN2Q9UBW5 565 aaPredicted RBP10.71□□□□□ -0.7
NUDCD3-203ENST00000460110 STX1AQ16623 288 aa10.7□□□□□ -0.7
NUDCD3-203ENST00000460110 EARS2Q5JPH6 523 aaKnown RBP10.7□□□□□ -0.7
NUDCD3-203ENST00000460110 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.7□□□□□ -0.7
NUDCD3-203ENST00000460110 SPEF2Q9C093 1822 aa10.7□□□□□ -0.7
NUDCD3-203ENST00000460110 FOXN1O15353 648 aa10.7□□□□□ -0.7
NUDCD3-203ENST00000460110 DDAH1O94760 285 aa10.7□□□□□ -0.7
NUDCD3-203ENST00000460110 TNNI2P48788 182 aa10.7□□□□□ -0.7
NUDCD3-203ENST00000460110 PTGDRQ13258 359 aa10.7□□□□□ -0.7
NUDCD3-203ENST00000460110 TTC38Q5R3I4 469 aa10.7□□□□□ -0.7
NUDCD3-203ENST00000460110 JDP2Q8WYK2 163 aa10.7□□□□□ -0.7
NUDCD3-203ENST00000460110 RRP36Q96EU6 259 aaKnown RBP10.7□□□□□ -0.7
NUDCD3-203ENST00000460110 EPSTI1Q96J88 318 aa10.7□□□□□ -0.7
NUDCD3-203ENST00000460110 NAT10Q9H0A0 1025 aaKnown RBP10.7□□□□□ -0.7
NUDCD3-203ENST00000460110 CEP131Q9UPN4 1083 aa10.7□□□□□ -0.7
NUDCD3-203ENST00000460110 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.7□□□□□ -0.7
NUDCD3-203ENST00000460110 POLD1P28340 1107 aa10.7□□□□□ -0.7
NUDCD3-203ENST00000460110 GNAQP50148 359 aa10.7□□□□□ -0.7
NUDCD3-203ENST00000460110 RHBDL3P58872 404 aa10.7□□□□□ -0.7
NUDCD3-203ENST00000460110 PPP4CP60510 307 aa10.7□□□□□ -0.7
NUDCD3-203ENST00000460110 CFAP100Q494V2 611 aa10.7□□□□□ -0.7
NUDCD3-203ENST00000460110 SBK1Q52WX2 424 aa10.7□□□□□ -0.7
NUDCD3-203ENST00000460110 RCSD1Q6JBY9 416 aa10.7□□□□□ -0.7
NUDCD3-203ENST00000460110 CCDC39Q9UFE4 941 aa10.7□□□□□ -0.7
NUDCD3-203ENST00000460110 AKAP11Q9UKA4 1901 aa10.7□□□□□ -0.7
NUDCD3-203ENST00000460110 CTAGE5O15320 804 aa10.69□□□□□ -0.7
NUDCD3-203ENST00000460110 COBLO75128 1261 aa10.69□□□□□ -0.7
NUDCD3-203ENST00000460110 DLGAP5Q15398 846 aa10.69□□□□□ -0.7
NUDCD3-203ENST00000460110 ATL3Q6DD88 541 aa10.69□□□□□ -0.7
NUDCD3-203ENST00000460110 CSRNP1Q96S65 589 aa10.69□□□□□ -0.7
NUDCD3-203ENST00000460110 CSRNP2Q9H175 543 aa10.69□□□□□ -0.7
NUDCD3-203ENST00000460110 PRPF3O43395 683 aaKnown RBP10.69□□□□□ -0.7
NUDCD3-203ENST00000460110 TPD52L1Q16890 204 aaPredicted RBP10.69□□□□□ -0.7
NUDCD3-203ENST00000460110 DPCR1Q3MIW9 517 aa10.69□□□□□ -0.7
NUDCD3-203ENST00000460110 LONRF3Q496Y0 759 aa10.69□□□□□ -0.7
NUDCD3-203ENST00000460110 CERKLQ49MI3 558 aaPredicted RBP10.69□□□□□ -0.7
NUDCD3-203ENST00000460110 TTBK2Q6IQ55 1244 aa10.69□□□□□ -0.7
NUDCD3-203ENST00000460110 TRMT1LQ7Z2T5 733 aaKnown RBP10.69□□□□□ -0.7
NUDCD3-203ENST00000460110 DGKHQ86XP1 1220 aa10.69□□□□□ -0.7
NUDCD3-203ENST00000460110 NUP88Q99567 741 aaPredicted RBP10.69□□□□□ -0.7
NUDCD3-203ENST00000460110 SERTAD1Q9UHV2 236 aa10.69□□□□□ -0.7
NUDCD3-203ENST00000460110 SMCO2A6NFE2 343 aa10.69□□□□□ -0.7
NUDCD3-203ENST00000460110 PCP11498 1178 aaKnown RBP10.69□□□□□ -0.7
NUDCD3-203ENST00000460110 STX17P56962 302 aa10.69□□□□□ -0.7
NUDCD3-203ENST00000460110 TPM4P67936 248 aa10.69□□□□□ -0.7
NUDCD3-203ENST00000460110 CCDC84Q86UT8 332 aaPredicted RBP10.69□□□□□ -0.7
NUDCD3-203ENST00000460110 ZSCAN30Q86W11 494 aa10.69□□□□□ -0.7
NUDCD3-203ENST00000460110 FBXL16Q8N461 479 aa10.69□□□□□ -0.7
NUDCD3-203ENST00000460110 CCDC34Q96HJ3 373 aa10.69□□□□□ -0.7
NUDCD3-203ENST00000460110 HOOK1Q9UJC3 728 aaKnown RBP10.69□□□□□ -0.7
NUDCD3-203ENST00000460110 MAPK8IP1Q9UQF2 711 aa10.69□□□□□ -0.7
NUDCD3-203ENST00000460110 TUBGCP6Q96RT7 1819 aa10.68□□□□□ -0.7
NUDCD3-203ENST00000460110 C4BP0C0L5 1744 aa10.68□□□□□ -0.7
NUDCD3-203ENST00000460110 SSBP05455 408 aaKnown RBP eCLIP10.68□□□□□ -0.7
NUDCD3-203ENST00000460110 SLC1A4P43007 532 aa10.68□□□□□ -0.7
NUDCD3-203ENST00000460110 USH1GQ495M9 461 aa10.68□□□□□ -0.7
NUDCD3-203ENST00000460110 SHC4Q6S5L8 630 aa10.68□□□□□ -0.7
NUDCD3-203ENST00000460110 BLIDQ8IZY5 108 aa10.68□□□□□ -0.7
NUDCD3-203ENST00000460110 PRMT6Q96LA8 375 aaPredicted RBP10.68□□□□□ -0.7
NUDCD3-203ENST00000460110 GOLGA6L6A8MZA4 724 aa10.68□□□□□ -0.7
NUDCD3-203ENST00000460110 SERPINC1P01008 464 aa10.68□□□□□ -0.7
NUDCD3-203ENST00000460110 TOP1P11387 765 aaKnown RBP10.68□□□□□ -0.7
NUDCD3-203ENST00000460110 CMA1P23946 247 aa10.68□□□□□ -0.7
NUDCD3-203ENST00000460110 TOB1P50616 345 aaPredicted RBP10.68□□□□□ -0.7
NUDCD3-203ENST00000460110 PRKG1Q13976 671 aa10.68□□□□□ -0.7
NUDCD3-203ENST00000460110 PKN1Q16512 942 aa10.68□□□□□ -0.7
NUDCD3-203ENST00000460110 NIM1KQ8IY84 436 aa10.68□□□□□ -0.7
NUDCD3-203ENST00000460110 DDTLA6NHG4 134 aaPredicted RBP10.67□□□□□ -0.7
NUDCD3-203ENST00000460110 SNW1Q13573 536 aaKnown RBP10.67□□□□□ -0.7
NUDCD3-203ENST00000460110 SEPT2Q15019 361 aa10.67□□□□□ -0.7
NUDCD3-203ENST00000460110 PPP2R5BQ15173 497 aa10.67□□□□□ -0.7
NUDCD3-203ENST00000460110 CCDC186Q7Z3E2 898 aa10.67□□□□□ -0.7
NUDCD3-203ENST00000460110 CAMKK2Q96RR4 588 aa10.67□□□□□ -0.7
NUDCD3-203ENST00000460110 BLZF1Q9H2G9 400 aa10.67□□□□□ -0.7
NUDCD3-203ENST00000460110 FOXP1Q9H334 677 aaPredicted RBP10.67□□□□□ -0.7
NUDCD3-203ENST00000460110 KIAA1468Q9P260 1216 aa10.67□□□□□ -0.7
NUDCD3-203ENST00000460110 BAZ2AQ9UIF9 1905 aaKnown RBP10.67□□□□□ -0.7
NUDCD3-203ENST00000460110 CCDC93Q567U6 631 aa10.67□□□□□ -0.7
NUDCD3-203ENST00000460110 APOBEC3HQ6NTF7 200 aaKnown RBP10.67□□□□□ -0.7
NUDCD3-203ENST00000460110 FMR1NBQ8N0W7 255 aaPredicted RBP10.67□□□□□ -0.7
NUDCD3-203ENST00000460110 HDAC9Q9UKV0 1011 aa10.67□□□□□ -0.7
NUDCD3-203ENST00000460110 ADAMTS3O15072 1205 aa10.67□□□□□ -0.7
NUDCD3-203ENST00000460110 CCNT1O60563 726 aaKnown RBP10.67□□□□□ -0.7
NUDCD3-203ENST00000460110 CUTAO60888 179 aa10.67□□□□□ -0.7
NUDCD3-203ENST00000460110 CALML3P27482 149 aa10.67□□□□□ -0.7
NUDCD3-203ENST00000460110 UBA7P41226 1012 aa10.67□□□□□ -0.7
NUDCD3-203ENST00000460110 TRMT44Q8IYL2 757 aaKnown RBP10.67□□□□□ -0.7
NUDCD3-203ENST00000460110 NEDD1Q8NHV4 660 aa10.67□□□□□ -0.7
NUDCD3-203ENST00000460110 OSBPL5Q9H0X9 879 aaPredicted RBP10.67□□□□□ -0.7
NUDCD3-203ENST00000460110 WNT7AO00755 349 aa10.66□□□□□ -0.7
NUDCD3-203ENST00000460110 PTGS1P23219 599 aa10.66□□□□□ -0.7
NUDCD3-203ENST00000460110 U2AF2P26368 475 aaKnown RBP eCLIP10.66□□□□□ -0.71e-6■■■■■ 28.5
NUDCD3-203ENST00000460110 AXDND1Q5T1B0 1012 aaPredicted RBP10.66□□□□□ -0.7
NUDCD3-203ENST00000460110 EEF2KMTQ96G04 330 aa10.66□□□□□ -0.7
NUDCD3-203ENST00000460110 FEZ1Q99689 392 aa10.66□□□□□ -0.7
NUDCD3-203ENST00000460110 NRBP1Q9UHY1 535 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms