RNA–Protein interactions for RNA: ENST00000459750.5

MCF2L2-204, Transcript of MCF.2 cell line derived transforming sequence-like 2, humanhuman

TSL 1 (best)

Gene MCF2L2, Length 3,090 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L2-204ENST00000459750 SNAP25P60880 206 aa10.32□□□□□ -0.76
MCF2L2-204ENST00000459750 RC3H1Q5TC82 1133 aaKnown RBP10.32□□□□□ -0.76
MCF2L2-204ENST00000459750 RCSD1Q6JBY9 416 aa10.32□□□□□ -0.76
MCF2L2-204ENST00000459750 ZSCAN29Q8IWY8 852 aaPredicted RBP10.32□□□□□ -0.76
MCF2L2-204ENST00000459750 GPCPD1Q9NPB8 672 aa10.32□□□□□ -0.76
MCF2L2-204ENST00000459750 ATRNO75882 1429 aa10.31□□□□□ -0.76
MCF2L2-204ENST00000459750 DDX60Q8IY21 1712 aaKnown RBP10.31□□□□□ -0.76
MCF2L2-204ENST00000459750 TRIM75PA6NK02 468 aa10.31□□□□□ -0.76
MCF2L2-204ENST00000459750 PES1O00541 588 aaKnown RBP10.31□□□□□ -0.76
MCF2L2-204ENST00000459750 KRT2P35908 639 aa10.31□□□□□ -0.76
MCF2L2-204ENST00000459750 SLC16A2P36021 539 aa10.31□□□□□ -0.76
MCF2L2-204ENST00000459750 TERF1P54274 439 aa10.31□□□□□ -0.76
MCF2L2-204ENST00000459750 RBM43Q6ZSC3 357 aaKnown RBP10.31□□□□□ -0.76
MCF2L2-204ENST00000459750 JMYQ8N9B5 988 aa10.31□□□□□ -0.76
MCF2L2-204ENST00000459750 TBC1D16Q8TBP0 767 aa10.31□□□□□ -0.76
MCF2L2-204ENST00000459750 CERKQ8TCT0 537 aa10.31□□□□□ -0.76
MCF2L2-204ENST00000459750 SYMPKQ92797 1274 aaKnown RBP10.31□□□□□ -0.76
MCF2L2-204ENST00000459750 PPP1R1BQ9UD71 204 aaPredicted RBP10.31□□□□□ -0.76
MCF2L2-204ENST00000459750 ANKRD36CQ5JPF3 1778 aa10.31□□□□□ -0.76
MCF2L2-204ENST00000459750 PSEN1P49768 467 aa10.31□□□□□ -0.76
MCF2L2-204ENST00000459750 INF2Q27J81 1249 aa10.31□□□□□ -0.76
MCF2L2-204ENST00000459750 HS1BP3Q53T59 392 aa10.31□□□□□ -0.76
MCF2L2-204ENST00000459750 PLA2G4DQ86XP0 818 aa10.31□□□□□ -0.76
MCF2L2-204ENST00000459750 COL23A1Q86Y22 540 aaPredicted RBP10.31□□□□□ -0.76
MCF2L2-204ENST00000459750 FBXL16Q8N461 479 aa10.31□□□□□ -0.76
MCF2L2-204ENST00000459750 KIAA1524Q8TCG1 905 aa10.31□□□□□ -0.76
MCF2L2-204ENST00000459750 BRIP1Q9BX63 1249 aa10.31□□□□□ -0.76
MCF2L2-204ENST00000459750 TTF2Q9UNY4 1162 aaKnown RBP10.31□□□□□ -0.76
MCF2L2-204ENST00000459750 FAM205AQ6ZU69 1335 aa10.31□□□□□ -0.76
MCF2L2-204ENST00000459750 ZBTB22O15209 634 aa10.3□□□□□ -0.76
MCF2L2-204ENST00000459750 FMR1Q06787 632 aaKnown RBP eCLIP10.3□□□□□ -0.76
MCF2L2-204ENST00000459750 KRBA2Q6ZNG9 492 aa10.3□□□□□ -0.76
MCF2L2-204ENST00000459750 TMTC2Q8N394 836 aa10.3□□□□□ -0.76
MCF2L2-204ENST00000459750 WASF1Q92558 559 aa10.3□□□□□ -0.76
MCF2L2-204ENST00000459750 ZC3H12CQ9C0D7 883 aaKnown RBP10.3□□□□□ -0.76
MCF2L2-204ENST00000459750 NAT10Q9H0A0 1025 aaKnown RBP10.3□□□□□ -0.76
MCF2L2-204ENST00000459750 A0A1W2PQ27 194 aa10.3□□□□□ -0.76
MCF2L2-204ENST00000459750 A0A1W2PQ64 194 aa10.3□□□□□ -0.76
MCF2L2-204ENST00000459750 A0A1W2PQD8 194 aa10.3□□□□□ -0.76
MCF2L2-204ENST00000459750 CTAGE5O15320 804 aa10.3□□□□□ -0.76
MCF2L2-204ENST00000459750 BAG3O95817 575 aa10.3□□□□□ -0.76
MCF2L2-204ENST00000459750 C12orf60Q5U649 245 aa10.3□□□□□ -0.76
MCF2L2-204ENST00000459750 JAKMIP3Q5VZ66 844 aa10.3□□□□□ -0.76
MCF2L2-204ENST00000459750 TMTC3Q6ZXV5 915 aa10.3□□□□□ -0.76
MCF2L2-204ENST00000459750 CERS3Q8IU89 383 aa10.3□□□□□ -0.76
MCF2L2-204ENST00000459750 ZFPM1Q8IX07 1006 aa10.3□□□□□ -0.76
MCF2L2-204ENST00000459750 EYA3Q99504 573 aa10.3□□□□□ -0.76
MCF2L2-204ENST00000459750 SAMSN1Q9NSI8 373 aaKnown RBP10.3□□□□□ -0.76
MCF2L2-204ENST00000459750 FBXO2Q9UK22 296 aaPredicted RBP10.3□□□□□ -0.76
MCF2L2-204ENST00000459750 XBP1P17861 261 aa10.3□□□□□ -0.76
MCF2L2-204ENST00000459750 SLC35G1Q2M3R5 365 aa10.3□□□□□ -0.76
MCF2L2-204ENST00000459750 RESP18Q5W5W9 173 aa10.3□□□□□ -0.76
MCF2L2-204ENST00000459750 WDR66Q8TBY9 1149 aa10.3□□□□□ -0.76
MCF2L2-204ENST00000459750 CEP95Q96GE4 821 aa10.3□□□□□ -0.76
MCF2L2-204ENST00000459750 TMEM47Q9BQJ4 181 aa10.3□□□□□ -0.76
MCF2L2-204ENST00000459750 CYTH3O43739 400 aa10.29□□□□□ -0.76
MCF2L2-204ENST00000459750 FUT2Q10981 343 aa10.29□□□□□ -0.76
MCF2L2-204ENST00000459750 NFIAQ12857 509 aa10.29□□□□□ -0.76
MCF2L2-204ENST00000459750 TTC38Q5R3I4 469 aa10.29□□□□□ -0.76
MCF2L2-204ENST00000459750 AMOTL1Q8IY63 956 aa10.29□□□□□ -0.76
MCF2L2-204ENST00000459750 COA7Q96BR5 231 aa10.29□□□□□ -0.76
MCF2L2-204ENST00000459750 RBM17Q96I25 401 aaKnown RBP10.29□□□□□ -0.76
MCF2L2-204ENST00000459750 ATP8A2Q9NTI2 1148 aa10.29□□□□□ -0.76
MCF2L2-204ENST00000459750 RTL9Q8NET4 1388 aa10.29□□□□□ -0.76
MCF2L2-204ENST00000459750 USP17L5A8MUK1 530 aa10.29□□□□□ -0.76
MCF2L2-204ENST00000459750 SCG2P13521 617 aa10.29□□□□□ -0.76
MCF2L2-204ENST00000459750 CDK8P49336 464 aa10.29□□□□□ -0.76
MCF2L2-204ENST00000459750 UBASH3AP57075 661 aa10.29□□□□□ -0.76
MCF2L2-204ENST00000459750 NLRP12P59046 1061 aa10.29□□□□□ -0.76
MCF2L2-204ENST00000459750 FANCCQ00597 558 aa10.29□□□□□ -0.76
MCF2L2-204ENST00000459750 KARSQ15046 597 aaKnown RBP10.29□□□□□ -0.76
MCF2L2-204ENST00000459750 POSTNQ15063 836 aa10.29□□□□□ -0.76
MCF2L2-204ENST00000459750 CERS5Q8N5B7 392 aa10.29□□□□□ -0.76
MCF2L2-204ENST00000459750 BIN2Q9UBW5 565 aaPredicted RBP10.29□□□□□ -0.76
MCF2L2-204ENST00000459750 KLRF2D3W0D1 207 aa10.28□□□□□ -0.76
MCF2L2-204ENST00000459750 PPEF1O14829 653 aaPredicted RBP10.28□□□□□ -0.76
MCF2L2-204ENST00000459750 TNNT1P13805 278 aa10.28□□□□□ -0.76
MCF2L2-204ENST00000459750 LETM2Q2VYF4 491 aa10.28□□□□□ -0.76
MCF2L2-204ENST00000459750 RILPL1Q5EBL4 403 aa10.28□□□□□ -0.76
MCF2L2-204ENST00000459750 SPTY2D1Q68D10 685 aaPredicted RBP10.28□□□□□ -0.76
MCF2L2-204ENST00000459750 DPP8Q6V1X1 898 aaPredicted RBP10.28□□□□□ -0.76
MCF2L2-204ENST00000459750 LRRC8AQ8IWT6 810 aa10.28□□□□□ -0.76
MCF2L2-204ENST00000459750 DDX4Q9NQI0 724 aaKnown RBP10.28□□□□□ -0.76
MCF2L2-204ENST00000459750 TMEM260Q9NX78 707 aa10.28□□□□□ -0.76
MCF2L2-204ENST00000459750 NRAPQ86VF7 1730 aa10.28□□□□□ -0.76
MCF2L2-204ENST00000459750 WDR19Q8NEZ3 1342 aa10.28□□□□□ -0.76
MCF2L2-204ENST00000459750 CNTNAP5Q8WYK1 1306 aa10.28□□□□□ -0.76
MCF2L2-204ENST00000459750 POLRMTO00411 1230 aaKnown RBP10.28□□□□□ -0.76
MCF2L2-204ENST00000459750 RIOK3O14730 519 aaKnown RBP10.28□□□□□ -0.76
MCF2L2-204ENST00000459750 CUTAO60888 179 aa10.28□□□□□ -0.76
MCF2L2-204ENST00000459750 ADKP55263 362 aaKnown RBP10.28□□□□□ -0.76
MCF2L2-204ENST00000459750 KCTD1Q719H9 257 aa10.28□□□□□ -0.76
MCF2L2-204ENST00000459750 RTFDC1Q9BY42 306 aaPredicted RBP10.28□□□□□ -0.76
MCF2L2-204ENST00000459750 RNF26Q9BY78 433 aaPredicted RBP10.28□□□□□ -0.76
MCF2L2-204ENST00000459750 ARPP21Q9UBL0 812 aaPredicted RBP10.28□□□□□ -0.76
MCF2L2-204ENST00000459750 MAN1B1Q9UKM7 699 aa10.28□□□□□ -0.76
MCF2L2-204ENST00000459750 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.28□□□□□ -0.76
MCF2L2-204ENST00000459750 NFE2L3Q9Y4A8 694 aa10.28□□□□□ -0.76
MCF2L2-204ENST00000459750 RASA1P20936 1047 aa10.27□□□□□ -0.76
MCF2L2-204ENST00000459750 CCT6AP40227 531 aaKnown RBP10.27□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms