RNA–Protein interactions for RNA: ENST00000456847.7

CPSF6-203, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 5 BASIC

Gene CPSF6, Length 1,915 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-203ENST00000456847 PLXNB2O15031 1838 aa19.35■□□□□ 0.69
CPSF6-203ENST00000456847 MYH4Q9Y623 1939 aa19.35■□□□□ 0.69
CPSF6-203ENST00000456847 SLC3A2P08195 630 aaKnown RBP19.34■□□□□ 0.69
CPSF6-203ENST00000456847 MAPK4P31152 587 aa19.34■□□□□ 0.69
CPSF6-203ENST00000456847 MTFR1Q15390 333 aa19.34■□□□□ 0.69
CPSF6-203ENST00000456847 SPICE1Q8N0Z3 855 aa19.34■□□□□ 0.69
CPSF6-203ENST00000456847 VCPKMTQ9H867 229 aa19.34■□□□□ 0.69
CPSF6-203ENST00000456847 HELLSQ9NRZ9 838 aa19.34■□□□□ 0.69
CPSF6-203ENST00000456847 RABGAP1Q9Y3P9 1069 aa19.34■□□□□ 0.69
CPSF6-203ENST00000456847 KIAA0100Q14667 2235 aaKnown RBP19.34■□□□□ 0.69
CPSF6-203ENST00000456847 PRDM1O75626 825 aa19.33■□□□□ 0.69
CPSF6-203ENST00000456847 CCNA1P78396 465 aa19.33■□□□□ 0.69
CPSF6-203ENST00000456847 PLEKHM2Q8IWE5 1019 aa19.33■□□□□ 0.69
CPSF6-203ENST00000456847 ZNF444Q8N0Y2 327 aaPredicted RBP19.33■□□□□ 0.69
CPSF6-203ENST00000456847 PARP14Q460N5 1801 aa19.33■□□□□ 0.68
CPSF6-203ENST00000456847 A0A0G2JMZ2 1700 aa19.33■□□□□ 0.68
CPSF6-203ENST00000456847 SPDYE16A6NNV3 312 aaPredicted RBP19.33■□□□□ 0.68
CPSF6-203ENST00000456847 Q3C1V9 767 aa19.33■□□□□ 0.68
CPSF6-203ENST00000456847 WDR78Q5VTH9 848 aa19.33■□□□□ 0.68
CPSF6-203ENST00000456847 SAMD1Q6SPF0 538 aaPredicted RBP19.33■□□□□ 0.68
CPSF6-203ENST00000456847 SIAH1Q8IUQ4 282 aa19.33■□□□□ 0.68
CPSF6-203ENST00000456847 PXYLP1Q8TE99 480 aa19.33■□□□□ 0.68
CPSF6-203ENST00000456847 GOPCQ9HD26 462 aa19.33■□□□□ 0.68
CPSF6-203ENST00000456847 INHAP05111 366 aa19.32■□□□□ 0.68
CPSF6-203ENST00000456847 CCL5P13501 91 aa19.32■□□□□ 0.68
CPSF6-203ENST00000456847 PDE4BQ07343 736 aa19.32■□□□□ 0.68
CPSF6-203ENST00000456847 PPARAQ07869 468 aa19.32■□□□□ 0.68
CPSF6-203ENST00000456847 KIAA1755Q5JYT7 1200 aa19.32■□□□□ 0.68
CPSF6-203ENST00000456847 SOCS4Q8WXH5 440 aa19.32■□□□□ 0.68
CPSF6-203ENST00000456847 FAM227BQ96M60 508 aa19.32■□□□□ 0.68
CPSF6-203ENST00000456847 PORCNQ9H237 461 aa19.32■□□□□ 0.68
CPSF6-203ENST00000456847 A0A0D9SFI3 127 aa19.31■□□□□ 0.68
CPSF6-203ENST00000456847 WDR46O15213 610 aaKnown RBP19.31■□□□□ 0.68
CPSF6-203ENST00000456847 CNMDO75829 334 aa19.31■□□□□ 0.68
CPSF6-203ENST00000456847 NMIQ13287 307 aaPredicted RBP19.31■□□□□ 0.68
CPSF6-203ENST00000456847 COG2Q14746 738 aa19.31■□□□□ 0.68
CPSF6-203ENST00000456847 LBX2Q6XYB7 198 aa19.31■□□□□ 0.68
CPSF6-203ENST00000456847 NUDT12Q9BQG2 462 aa19.31■□□□□ 0.68
CPSF6-203ENST00000456847 RNF208Q9H0X6 261 aa19.31■□□□□ 0.68
CPSF6-203ENST00000456847 RLFQ13129 1914 aa19.31■□□□□ 0.68
CPSF6-203ENST00000456847 FLOT1O75955 427 aa19.31■□□□□ 0.68
CPSF6-203ENST00000456847 MCMDC2Q4G0Z9 681 aa19.31■□□□□ 0.68
CPSF6-203ENST00000456847 POTEEQ6S8J3 1075 aa19.31■□□□□ 0.68
CPSF6-203ENST00000456847 OSBPL3Q9H4L5 887 aa19.31■□□□□ 0.68
CPSF6-203ENST00000456847 HOXC10Q9NYD6 342 aa19.31■□□□□ 0.68
CPSF6-203ENST00000456847 CYP2B6P20813 491 aa19.3■□□□□ 0.68
CPSF6-203ENST00000456847 VPS53Q5VIR6 699 aa19.3■□□□□ 0.68
CPSF6-203ENST00000456847 GPR142Q7Z601 462 aa19.3■□□□□ 0.68
CPSF6-203ENST00000456847 PLEKHH3Q7Z736 793 aa19.3■□□□□ 0.68
CPSF6-203ENST00000456847 TICAM2Q86XR7 235 aa19.3■□□□□ 0.68
CPSF6-203ENST00000456847 GNL3Q9BVP2 549 aaKnown RBP eCLIP19.3■□□□□ 0.68
CPSF6-203ENST00000456847 BTBD7Q9P203 1132 aa19.3■□□□□ 0.68
CPSF6-203ENST00000456847 GJD2Q9UKL4 321 aa19.3■□□□□ 0.68
CPSF6-203ENST00000456847 TSPY3P0CV98 308 aa19.29■□□□□ 0.68
CPSF6-203ENST00000456847 TSPY8P0CW00 308 aa19.29■□□□□ 0.68
CPSF6-203ENST00000456847 UNC93B1Q9H1C4 597 aa19.29■□□□□ 0.68
CPSF6-203ENST00000456847 COL11A1P12107 1806 aaPredicted RBP19.29■□□□□ 0.68
CPSF6-203ENST00000456847 HMGCRP04035 888 aa19.29■□□□□ 0.68
CPSF6-203ENST00000456847 NKX2-3Q8TAU0 364 aa19.29■□□□□ 0.68
CPSF6-203ENST00000456847 NYAP2Q9P242 653 aa19.29■□□□□ 0.68
CPSF6-203ENST00000456847 FOXP2O15409 715 aa19.28■□□□□ 0.68
CPSF6-203ENST00000456847 DSG3P32926 999 aa19.28■□□□□ 0.68
CPSF6-203ENST00000456847 CTDSPL2Q05D32 466 aa19.28■□□□□ 0.68
CPSF6-203ENST00000456847 IVNS1ABPQ9Y6Y0 642 aa19.28■□□□□ 0.68
CPSF6-203ENST00000456847 CCDC171Q6TFL3 1326 aa19.28■□□□□ 0.68
CPSF6-203ENST00000456847 SDSP20132 328 aa19.27■□□□□ 0.68
CPSF6-203ENST00000456847 RGS2P41220 211 aa19.27■□□□□ 0.68
CPSF6-203ENST00000456847 PLS1Q14651 629 aa19.27■□□□□ 0.68
CPSF6-203ENST00000456847 MB21D1Q8N884 522 aa19.27■□□□□ 0.68
CPSF6-203ENST00000456847 ATG4CQ96DT6 458 aa19.27■□□□□ 0.68
CPSF6-203ENST00000456847 DIAPH3Q9NSV4 1193 aa19.27■□□□□ 0.68
CPSF6-203ENST00000456847 CLIP2Q9UDT6 1046 aa19.27■□□□□ 0.68
CPSF6-203ENST00000456847 GJB1P08034 283 aa19.27■□□□□ 0.67
CPSF6-203ENST00000456847 MFAP1P55081 439 aaKnown RBP19.27■□□□□ 0.67
CPSF6-203ENST00000456847 FAM47AQ5JRC9 791 aa19.27■□□□□ 0.67
CPSF6-203ENST00000456847 FAM83BQ5T0W9 1011 aa19.27■□□□□ 0.67
CPSF6-203ENST00000456847 ZNF589Q86UQ0 364 aaPredicted RBP19.27■□□□□ 0.67
CPSF6-203ENST00000456847 CEP95Q96GE4 821 aa19.27■□□□□ 0.67
CPSF6-203ENST00000456847 PLIN4Q96Q06 1357 aa19.27■□□□□ 0.67
CPSF6-203ENST00000456847 IGKV6D-41A0A0C4DH26 115 aa19.26■□□□□ 0.67
CPSF6-203ENST00000456847 ZKSCAN1P17029 563 aaPredicted RBP19.26■□□□□ 0.67
CPSF6-203ENST00000456847 TFAP4Q01664 338 aa19.26■□□□□ 0.67
CPSF6-203ENST00000456847 TTLL1O95922 423 aa19.25■□□□□ 0.67
CPSF6-203ENST00000456847 MORN1Q5T089 497 aa19.25■□□□□ 0.67
CPSF6-203ENST00000456847 NEDD1Q8NHV4 660 aa19.25■□□□□ 0.67
CPSF6-203ENST00000456847 TRIB2Q92519 343 aa19.25■□□□□ 0.67
CPSF6-203ENST00000456847 SHISA4Q96DD7 197 aa19.25■□□□□ 0.67
CPSF6-203ENST00000456847 APBA2Q99767 749 aa19.25■□□□□ 0.67
CPSF6-203ENST00000456847 SPATC1LQ9H0A9 340 aa19.25■□□□□ 0.67
CPSF6-203ENST00000456847 TOMM22Q9NS69 142 aa19.25■□□□□ 0.67
CPSF6-203ENST00000456847 CENPFP49454 3210 aa19.25■□□□□ 0.67
CPSF6-203ENST00000456847 TSPY2A6NKD2 308 aa19.25■□□□□ 0.67
CPSF6-203ENST00000456847 HIP1O00291 1037 aa19.25■□□□□ 0.67
CPSF6-203ENST00000456847 HSPD1P10809 573 aaKnown RBP19.25■□□□□ 0.67
CPSF6-203ENST00000456847 GJA8P48165 433 aa19.25■□□□□ 0.67
CPSF6-203ENST00000456847 MAP2K5Q13163 448 aa19.25■□□□□ 0.67
CPSF6-203ENST00000456847 ALX1Q15699 326 aa19.25■□□□□ 0.67
CPSF6-203ENST00000456847 TRMT44Q8IYL2 757 aaKnown RBP19.25■□□□□ 0.67
CPSF6-203ENST00000456847 LRRC47Q8N1G4 583 aaKnown RBP19.25■□□□□ 0.67
CPSF6-203ENST00000456847 NUP88Q99567 741 aaPredicted RBP19.25■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms