RNA–Protein interactions for RNA: ENST00000455111.1

GPC1-206, Transcript of glypican 1, humanhuman

TSL 3

Gene GPC1, Length 841 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-206ENST00000455111 APBA2Q99767 749 aa19.4■□□□□ 0.7
GPC1-206ENST00000455111 ZNFX1Q9P2E3 1918 aaKnown RBP19.4■□□□□ 0.7
GPC1-206ENST00000455111 LAMA3Q16787 3333 aa19.4■□□□□ 0.7
GPC1-206ENST00000455111 EVI5O60447 810 aa19.39■□□□□ 0.69
GPC1-206ENST00000455111 COL6A1P12109 1028 aa19.39■□□□□ 0.69
GPC1-206ENST00000455111 ZKSCAN1P17029 563 aaPredicted RBP19.39■□□□□ 0.69
GPC1-206ENST00000455111 RGS2P41220 211 aa19.39■□□□□ 0.69
GPC1-206ENST00000455111 GRB14Q14449 540 aa19.39■□□□□ 0.69
GPC1-206ENST00000455111 UBE3CQ15386 1083 aa19.39■□□□□ 0.69
GPC1-206ENST00000455111 GNL3Q9BVP2 549 aaKnown RBP eCLIP19.39■□□□□ 0.69
GPC1-206ENST00000455111 STAP2Q9UGK3 403 aa19.39■□□□□ 0.69
GPC1-206ENST00000455111 USP17L12C9JPN9 530 aa19.38■□□□□ 0.69
GPC1-206ENST00000455111 USP17L21D6R901 530 aa19.38■□□□□ 0.69
GPC1-206ENST00000455111 MPHOSPH10O00566 681 aaKnown RBP19.38■□□□□ 0.69
GPC1-206ENST00000455111 CAPN2P17655 700 aa19.38■□□□□ 0.69
GPC1-206ENST00000455111 CDK8P49336 464 aa19.38■□□□□ 0.69
GPC1-206ENST00000455111 CTR9Q6PD62 1173 aa19.38■□□□□ 0.69
GPC1-206ENST00000455111 MOV10L1Q9BXT6 1211 aaKnown RBP19.38■□□□□ 0.69
GPC1-206ENST00000455111 LRRCC1Q9C099 1032 aa19.38■□□□□ 0.69
GPC1-206ENST00000455111 ATP8A2Q9NTI2 1148 aa19.38■□□□□ 0.69
GPC1-206ENST00000455111 DNAH12Q6ZR08 3092 aa19.38■□□□□ 0.69
GPC1-206ENST00000455111 HOXC6P09630 235 aa19.37■□□□□ 0.69
GPC1-206ENST00000455111 TMEM179Q6ZVK1 233 aa19.37■□□□□ 0.69
GPC1-206ENST00000455111 C16orf86Q6ZW13 317 aa19.37■□□□□ 0.69
GPC1-206ENST00000455111 C7orf61Q8IZ16 206 aa19.37■□□□□ 0.69
GPC1-206ENST00000455111 NBPF3Q9H094 633 aa19.37■□□□□ 0.69
GPC1-206ENST00000455111 C11orf49Q9H6J7 331 aa19.37■□□□□ 0.69
GPC1-206ENST00000455111 DCTPP1Q9H773 170 aa19.37■□□□□ 0.69
GPC1-206ENST00000455111 ZMYND8Q9ULU4 1186 aaPredicted RBP19.37■□□□□ 0.69
GPC1-206ENST00000455111 NR2E3Q9Y5X4 410 aa19.37■□□□□ 0.69
GPC1-206ENST00000455111 SLC15A5A6NIM6 579 aa19.36■□□□□ 0.69
GPC1-206ENST00000455111 SPICE1Q8N0Z3 855 aa19.36■□□□□ 0.69
GPC1-206ENST00000455111 GDF15Q99988 308 aa19.36■□□□□ 0.69
GPC1-206ENST00000455111 SWAP70Q9UH65 585 aa19.36■□□□□ 0.69
GPC1-206ENST00000455111 TMX2Q9Y320 296 aa19.36■□□□□ 0.69
GPC1-206ENST00000455111 PLXNA1Q9UIW2 1896 aa19.36■□□□□ 0.69
GPC1-206ENST00000455111 COBLO75128 1261 aa19.35■□□□□ 0.69
GPC1-206ENST00000455111 DSG3P32926 999 aa19.35■□□□□ 0.69
GPC1-206ENST00000455111 COG2Q14746 738 aa19.35■□□□□ 0.69
GPC1-206ENST00000455111 OSBP2Q969R2 916 aa19.35■□□□□ 0.69
GPC1-206ENST00000455111 ATG4CQ96DT6 458 aa19.35■□□□□ 0.69
GPC1-206ENST00000455111 STRBPQ96SI9 672 aaKnown RBP19.35■□□□□ 0.69
GPC1-206ENST00000455111 VCPKMTQ9H867 229 aa19.35■□□□□ 0.69
GPC1-206ENST00000455111 PCDHB15Q9Y5E8 787 aa19.35■□□□□ 0.69
GPC1-206ENST00000455111 SLC4A4Q9Y6R1 1079 aa19.35■□□□□ 0.69
GPC1-206ENST00000455111 GSG1L2A8MUP6 293 aa19.34■□□□□ 0.69
GPC1-206ENST00000455111 SYN1P17600 705 aa19.34■□□□□ 0.69
GPC1-206ENST00000455111 CYP2C19P33261 490 aa19.34■□□□□ 0.69
GPC1-206ENST00000455111 ICA1Q05084 483 aa19.34■□□□□ 0.69
GPC1-206ENST00000455111 LRRC26Q2I0M4 334 aa19.34■□□□□ 0.69
GPC1-206ENST00000455111 WDR78Q5VTH9 848 aa19.34■□□□□ 0.69
GPC1-206ENST00000455111 TRMT44Q8IYL2 757 aaKnown RBP19.34■□□□□ 0.69
GPC1-206ENST00000455111 OTUD7AQ8TE49 926 aaPredicted RBP19.34■□□□□ 0.69
GPC1-206ENST00000455111 SPATC1LQ9H0A9 340 aa19.34■□□□□ 0.69
GPC1-206ENST00000455111 EPB41L4AQ9HCS5 686 aaPredicted RBP19.34■□□□□ 0.69
GPC1-206ENST00000455111 ECHDC1Q9NTX5 307 aa19.34■□□□□ 0.69
GPC1-206ENST00000455111 FBXO28Q9NVF7 368 aa19.34■□□□□ 0.69
GPC1-206ENST00000455111 LTBP2Q14767 1821 aa19.34■□□□□ 0.69
GPC1-206ENST00000455111 MYH4Q9Y623 1939 aa19.33■□□□□ 0.69
GPC1-206ENST00000455111 EEF2P13639 858 aaKnown RBP19.33■□□□□ 0.68
GPC1-206ENST00000455111 ERCC3P19447 782 aa19.33■□□□□ 0.68
GPC1-206ENST00000455111 CCNA1P78396 465 aa19.33■□□□□ 0.68
GPC1-206ENST00000455111 LRCH3Q96II8 777 aa19.33■□□□□ 0.68
GPC1-206ENST00000455111 TANGO6Q9C0B7 1094 aa19.33■□□□□ 0.68
GPC1-206ENST00000455111 DDX24Q9GZR7 859 aaKnown RBP eCLIP19.33■□□□□ 0.68
GPC1-206ENST00000455111 ADAMTS5Q9UNA0 930 aa19.33■□□□□ 0.68
GPC1-206ENST00000455111 CYBAP13498 195 aa19.32■□□□□ 0.68
GPC1-206ENST00000455111 TMEM132BQ14DG7 1078 aa19.32■□□□□ 0.68
GPC1-206ENST00000455111 CCAR1Q8IX12 1150 aaKnown RBP19.32■□□□□ 0.68
GPC1-206ENST00000455111 KBTBD3Q8NAB2 608 aa19.32■□□□□ 0.68
GPC1-206ENST00000455111 REPS2Q8NFH8 660 aa19.32■□□□□ 0.68
GPC1-206ENST00000455111 M0R2C6 588 aa19.31■□□□□ 0.68
GPC1-206ENST00000455111 ADORA2AP29274 412 aa19.31■□□□□ 0.68
GPC1-206ENST00000455111 CHMP4BQ9H444 224 aaKnown RBP19.31■□□□□ 0.68
GPC1-206ENST00000455111 ROBO3Q96MS0 1386 aa19.31■□□□□ 0.68
GPC1-206ENST00000455111 RASA1P20936 1047 aa19.3■□□□□ 0.68
GPC1-206ENST00000455111 MAGEA10P43363 369 aaPredicted RBP19.3■□□□□ 0.68
GPC1-206ENST00000455111 SBK1Q52WX2 424 aa19.3■□□□□ 0.68
GPC1-206ENST00000455111 STK11IPQ8N1F8 1099 aa19.3■□□□□ 0.68
GPC1-206ENST00000455111 SHCBP1Q8NEM2 672 aa19.3■□□□□ 0.68
GPC1-206ENST00000455111 PI4K2BQ8TCG2 481 aa19.3■□□□□ 0.68
GPC1-206ENST00000455111 LPAR1Q92633 364 aa19.3■□□□□ 0.68
GPC1-206ENST00000455111 CCDC17Q96LX7 622 aa19.3■□□□□ 0.68
GPC1-206ENST00000455111 SEC62Q99442 399 aaKnown RBP19.3■□□□□ 0.68
GPC1-206ENST00000455111 HOXC10Q9NYD6 342 aa19.3■□□□□ 0.68
GPC1-206ENST00000455111 DDX20Q9UHI6 824 aaKnown RBP19.3■□□□□ 0.68
GPC1-206ENST00000455111 SMCHD1A6NHR9 2005 aa19.29■□□□□ 0.68
GPC1-206ENST00000455111 WDR46O15213 610 aaKnown RBP19.29■□□□□ 0.68
GPC1-206ENST00000455111 FLOT1O75955 427 aa19.29■□□□□ 0.68
GPC1-206ENST00000455111 BMP8BP34820 402 aa19.29■□□□□ 0.68
GPC1-206ENST00000455111 PRAMEF19Q5SWL8 479 aa19.29■□□□□ 0.68
GPC1-206ENST00000455111 ARHGEF10LQ9HCE6 1279 aa19.29■□□□□ 0.68
GPC1-206ENST00000455111 SALL3Q9BXA9 1300 aa19.28■□□□□ 0.68
GPC1-206ENST00000455111 IGKV6D-41A0A0C4DH26 115 aa19.28■□□□□ 0.68
GPC1-206ENST00000455111 A0A1W2PPC1 479 aa19.28■□□□□ 0.68
GPC1-206ENST00000455111 GLRX3O76003 335 aaKnown RBP19.28■□□□□ 0.68
GPC1-206ENST00000455111 ATP2B2Q01814 1243 aa19.28■□□□□ 0.68
GPC1-206ENST00000455111 MFSD14CQ5VZR4 134 aa19.28■□□□□ 0.68
GPC1-206ENST00000455111 ANO1Q5XXA6 986 aa19.28■□□□□ 0.68
GPC1-206ENST00000455111 APPBP2Q92624 585 aa19.28■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms