RNA–Protein interactions for RNA: ENST00000452111.5

CTNS-204, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 3

Gene CTNS, Length 617 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-204ENST00000452111 TNRC18O15417 2968 aaPredicted RBP21.42■■□□□ 1.02
CTNS-204ENST00000452111 CNMDO75829 334 aa21.42■■□□□ 1.02
CTNS-204ENST00000452111 INHAP05111 366 aa21.42■■□□□ 1.02
CTNS-204ENST00000452111 CCL5P13501 91 aa21.42■■□□□ 1.02
CTNS-204ENST00000452111 RASA1P20936 1047 aa21.42■■□□□ 1.02
CTNS-204ENST00000452111 PXYLP1Q8TE99 480 aa21.42■■□□□ 1.02
CTNS-204ENST00000452111 VCPKMTQ9H867 229 aa21.42■■□□□ 1.02
CTNS-204ENST00000452111 KANSL2Q9H9L4 492 aa21.42■■□□□ 1.02
CTNS-204ENST00000452111 GJD2Q9UKL4 321 aa21.42■■□□□ 1.02
CTNS-204ENST00000452111 RABGAP1Q9Y3P9 1069 aa21.42■■□□□ 1.02
CTNS-204ENST00000452111 TRIM6-TRIM34B2RNG4 842 aa21.41■■□□□ 1.02
CTNS-204ENST00000452111 PRDM1O75626 825 aa21.41■■□□□ 1.02
CTNS-204ENST00000452111 MAPK4P31152 587 aa21.41■■□□□ 1.02
CTNS-204ENST00000452111 LPAR1Q92633 364 aa21.41■■□□□ 1.02
CTNS-204ENST00000452111 GNL3Q9BVP2 549 aaKnown RBP eCLIP21.41■■□□□ 1.02
CTNS-204ENST00000452111 RNF208Q9H0X6 261 aa21.41■■□□□ 1.02
CTNS-204ENST00000452111 CWC22Q9HCG8 908 aaKnown RBP21.41■■□□□ 1.02
CTNS-204ENST00000452111 LBX2Q6XYB7 198 aa21.4■■□□□ 1.02
CTNS-204ENST00000452111 RILPL2Q969X0 211 aa21.4■■□□□ 1.02
CTNS-204ENST00000452111 UNC93B1Q9H1C4 597 aa21.4■■□□□ 1.02
CTNS-204ENST00000452111 BTBD7Q9P203 1132 aa21.4■■□□□ 1.02
CTNS-204ENST00000452111 RBBP6Q7Z6E9 1792 aaKnown RBP21.39■■□□□ 1.01
CTNS-204ENST00000452111 RAD21O60216 631 aa21.39■■□□□ 1.01
CTNS-204ENST00000452111 CYP2B6P20813 491 aa21.39■■□□□ 1.01
CTNS-204ENST00000452111 CCNA1P78396 465 aa21.39■■□□□ 1.01
CTNS-204ENST00000452111 COG2Q14746 738 aa21.39■■□□□ 1.01
CTNS-204ENST00000452111 WDR78Q5VTH9 848 aa21.39■■□□□ 1.01
CTNS-204ENST00000452111 GPR142Q7Z601 462 aa21.39■■□□□ 1.01
CTNS-204ENST00000452111 PLEKHM2Q8IWE5 1019 aa21.39■■□□□ 1.01
CTNS-204ENST00000452111 SOCS4Q8WXH5 440 aa21.39■■□□□ 1.01
CTNS-204ENST00000452111 FAM227BQ96M60 508 aa21.39■■□□□ 1.01
CTNS-204ENST00000452111 NUDT12Q9BQG2 462 aa21.39■■□□□ 1.01
CTNS-204ENST00000452111 ZNF287Q9HBT7 754 aa21.39■■□□□ 1.01
CTNS-204ENST00000452111 MYH8P13535 1937 aa21.39■■□□□ 1.01
CTNS-204ENST00000452111 A0A0D9SFI3 127 aa21.38■■□□□ 1.01
CTNS-204ENST00000452111 FOXP2O15409 715 aa21.38■■□□□ 1.01
CTNS-204ENST00000452111 FLOT1O75955 427 aa21.38■■□□□ 1.01
CTNS-204ENST00000452111 PPARAQ07869 468 aa21.38■■□□□ 1.01
CTNS-204ENST00000452111 VPS53Q5VIR6 699 aa21.38■■□□□ 1.01
CTNS-204ENST00000452111 SAMD1Q6SPF0 538 aaPredicted RBP21.38■■□□□ 1.01
CTNS-204ENST00000452111 PLEKHH3Q7Z736 793 aa21.38■■□□□ 1.01
CTNS-204ENST00000452111 ZNF444Q8N0Y2 327 aaPredicted RBP21.38■■□□□ 1.01
CTNS-204ENST00000452111 GOPCQ9HD26 462 aa21.38■■□□□ 1.01
CTNS-204ENST00000452111 HELLSQ9NRZ9 838 aa21.38■■□□□ 1.01
CTNS-204ENST00000452111 WDR46O15213 610 aaKnown RBP21.37■■□□□ 1.01
CTNS-204ENST00000452111 HMGCRP04035 888 aa21.37■■□□□ 1.01
CTNS-204ENST00000452111 GJB1P08034 283 aa21.37■■□□□ 1.01
CTNS-204ENST00000452111 SLC3A2P08195 630 aaKnown RBP21.37■■□□□ 1.01
CTNS-204ENST00000452111 SHISA4Q96DD7 197 aa21.37■■□□□ 1.01
CTNS-204ENST00000452111 HOXC10Q9NYD6 342 aa21.37■■□□□ 1.01
CTNS-204ENST00000452111 PDE4BQ07343 736 aa21.36■■□□□ 1.01
CTNS-204ENST00000452111 NMIQ13287 307 aaPredicted RBP21.36■■□□□ 1.01
CTNS-204ENST00000452111 NKX2-3Q8TAU0 364 aa21.36■■□□□ 1.01
CTNS-204ENST00000452111 OSBPL3Q9H4L5 887 aa21.36■■□□□ 1.01
CTNS-204ENST00000452111 DOCK3Q8IZD9 2030 aa21.36■■□□□ 1.01
CTNS-204ENST00000452111 PDE4DIPQ5VU43 2346 aa21.35■■□□□ 1.01
CTNS-204ENST00000452111 DSG3P32926 999 aa21.35■■□□□ 1.01
CTNS-204ENST00000452111 GJA8P48165 433 aa21.35■■□□□ 1.01
CTNS-204ENST00000452111 TRIM32Q13049 653 aa21.35■■□□□ 1.01
CTNS-204ENST00000452111 MCMDC2Q4G0Z9 681 aa21.35■■□□□ 1.01
CTNS-204ENST00000452111 MORN1Q5T089 497 aa21.35■■□□□ 1.01
CTNS-204ENST00000452111 TRIB2Q92519 343 aa21.35■■□□□ 1.01
CTNS-204ENST00000452111 ATG4CQ96DT6 458 aa21.35■■□□□ 1.01
CTNS-204ENST00000452111 IGKV6D-41A0A0C4DH26 115 aa21.34■■□□□ 1.01
CTNS-204ENST00000452111 TSPY3P0CV98 308 aa21.34■■□□□ 1.01
CTNS-204ENST00000452111 TSPY8P0CW00 308 aa21.34■■□□□ 1.01
CTNS-204ENST00000452111 RGS2P41220 211 aa21.34■■□□□ 1.01
CTNS-204ENST00000452111 CTDSPL2Q05D32 466 aa21.34■■□□□ 1.01
CTNS-204ENST00000452111 FAM47AQ5JRC9 791 aa21.34■■□□□ 1.01
CTNS-204ENST00000452111 FAM83BQ5T0W9 1011 aa21.34■■□□□ 1.01
CTNS-204ENST00000452111 ZNF589Q86UQ0 364 aaPredicted RBP21.34■■□□□ 1.01
CTNS-204ENST00000452111 U2AF1L4Q8WU68 220 aaKnown RBP21.34■■□□□ 1.01
CTNS-204ENST00000452111 CEP95Q96GE4 821 aa21.34■■□□□ 1.01
CTNS-204ENST00000452111 FBXO28Q9NVF7 368 aa21.34■■□□□ 1.01
CTNS-204ENST00000452111 NYAP2Q9P242 653 aa21.34■■□□□ 1.01
CTNS-204ENST00000452111 CLIP2Q9UDT6 1046 aa21.34■■□□□ 1.01
CTNS-204ENST00000452111 ZKSCAN1P17029 563 aaPredicted RBP21.33■■□□□ 1.01
CTNS-204ENST00000452111 PLS1Q14651 629 aa21.33■■□□□ 1.01
CTNS-204ENST00000452111 TICAM2Q86XR7 235 aa21.33■■□□□ 1.01
CTNS-204ENST00000452111 MB21D1Q8N884 522 aa21.33■■□□□ 1.01
CTNS-204ENST00000452111 USP6NLQ92738 828 aa21.33■■□□□ 1.01
CTNS-204ENST00000452111 DEFB118Q96PH6 123 aa21.33■■□□□ 1.01
CTNS-204ENST00000452111 NUP88Q99567 741 aaPredicted RBP21.33■■□□□ 1.01
CTNS-204ENST00000452111 MOV10L1Q9BXT6 1211 aaKnown RBP21.33■■□□□ 1.01
CTNS-204ENST00000452111 SPATC1LQ9H0A9 340 aa21.33■■□□□ 1.01
CTNS-204ENST00000452111 IVNS1ABPQ9Y6Y0 642 aa21.33■■□□□ 1.01
CTNS-204ENST00000452111 GREB1LQ9C091 1923 aaPredicted RBP21.32■■□□□ 1
CTNS-204ENST00000452111 XRCC5P13010 732 aaKnown RBP21.32■■□□□ 1
CTNS-204ENST00000452111 SDSP20132 328 aa21.32■■□□□ 1
CTNS-204ENST00000452111 TFAP4Q01664 338 aa21.32■■□□□ 1
CTNS-204ENST00000452111 MAP2K5Q13163 448 aa21.32■■□□□ 1
CTNS-204ENST00000452111 PRPF38BQ5VTL8 546 aaKnown RBP21.32■■□□□ 1
CTNS-204ENST00000452111 APBA2Q99767 749 aa21.32■■□□□ 1
CTNS-204ENST00000452111 XRN2Q9H0D6 950 aaKnown RBP eCLIP21.32■■□□□ 1
CTNS-204ENST00000452111 PAK6Q9NQU5 681 aaPredicted RBP21.32■■□□□ 1
CTNS-204ENST00000452111 MTMR4Q9NYA4 1195 aa21.32■■□□□ 1
CTNS-204ENST00000452111 CCDC171Q6TFL3 1326 aa21.31■■□□□ 1
CTNS-204ENST00000452111 F5H6K3 240 aa21.31■■□□□ 1
CTNS-204ENST00000452111 SGPL1O95470 568 aa21.31■■□□□ 1
CTNS-204ENST00000452111 NDUFB10O96000 172 aa21.31■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms