RNA–Protein interactions for RNA: ENST00000436324.5

HMGN1-207, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 1,045 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-207ENST00000436324 KANSL2Q9H9L4 492 aa21.86■■□□□ 1.09
HMGN1-207ENST00000436324 CWC22Q9HCG8 908 aaKnown RBP21.86■■□□□ 1.09
HMGN1-207ENST00000436324 GJD2Q9UKL4 321 aa21.86■■□□□ 1.09
HMGN1-207ENST00000436324 TMX2Q9Y320 296 aa21.86■■□□□ 1.09
HMGN1-207ENST00000436324 RABGAP1Q9Y3P9 1069 aa21.86■■□□□ 1.09
HMGN1-207ENST00000436324 RAD21O60216 631 aa21.85■■□□□ 1.09
HMGN1-207ENST00000436324 INHAP05111 366 aa21.85■■□□□ 1.09
HMGN1-207ENST00000436324 PLEKHM2Q8IWE5 1019 aa21.85■■□□□ 1.09
HMGN1-207ENST00000436324 GNL3Q9BVP2 549 aaKnown RBP eCLIP21.85■■□□□ 1.09
HMGN1-207ENST00000436324 RNF208Q9H0X6 261 aa21.85■■□□□ 1.09
HMGN1-207ENST00000436324 VCPKMTQ9H867 229 aa21.85■■□□□ 1.09
HMGN1-207ENST00000436324 SPDYE16A6NNV3 312 aaPredicted RBP21.84■■□□□ 1.09
HMGN1-207ENST00000436324 CYP2B6P20813 491 aa21.84■■□□□ 1.09
HMGN1-207ENST00000436324 MAPK4P31152 587 aa21.84■■□□□ 1.09
HMGN1-207ENST00000436324 COG2Q14746 738 aa21.84■■□□□ 1.09
HMGN1-207ENST00000436324 WDR78Q5VTH9 848 aa21.84■■□□□ 1.09
HMGN1-207ENST00000436324 ZNF444Q8N0Y2 327 aaPredicted RBP21.84■■□□□ 1.09
HMGN1-207ENST00000436324 PXYLP1Q8TE99 480 aa21.84■■□□□ 1.09
HMGN1-207ENST00000436324 FAM227BQ96M60 508 aa21.84■■□□□ 1.09
HMGN1-207ENST00000436324 UNC93B1Q9H1C4 597 aa21.84■■□□□ 1.09
HMGN1-207ENST00000436324 BTBD7Q9P203 1132 aa21.84■■□□□ 1.09
HMGN1-207ENST00000436324 ROBO3Q96MS0 1386 aa21.84■■□□□ 1.09
HMGN1-207ENST00000436324 KIAA0100Q14667 2235 aaKnown RBP21.83■■□□□ 1.09
HMGN1-207ENST00000436324 MYH8P13535 1937 aa21.83■■□□□ 1.09
HMGN1-207ENST00000436324 LPAR1Q92633 364 aa21.83■■□□□ 1.09
HMGN1-207ENST00000436324 HTTP42858 3142 aa21.83■■□□□ 1.08
HMGN1-207ENST00000436324 A0A0D9SFI3 127 aa21.82■■□□□ 1.08
HMGN1-207ENST00000436324 CCNA1P78396 465 aa21.82■■□□□ 1.08
HMGN1-207ENST00000436324 PPARAQ07869 468 aa21.82■■□□□ 1.08
HMGN1-207ENST00000436324 VPS53Q5VIR6 699 aa21.82■■□□□ 1.08
HMGN1-207ENST00000436324 GPR142Q7Z601 462 aa21.82■■□□□ 1.08
HMGN1-207ENST00000436324 PLEKHH3Q7Z736 793 aa21.82■■□□□ 1.08
HMGN1-207ENST00000436324 NUDT12Q9BQG2 462 aa21.82■■□□□ 1.08
HMGN1-207ENST00000436324 ZNF287Q9HBT7 754 aa21.82■■□□□ 1.08
HMGN1-207ENST00000436324 HELLSQ9NRZ9 838 aa21.82■■□□□ 1.08
HMGN1-207ENST00000436324 HOXC10Q9NYD6 342 aa21.82■■□□□ 1.08
HMGN1-207ENST00000436324 DOCK3Q8IZD9 2030 aa21.82■■□□□ 1.08
HMGN1-207ENST00000436324 FOXP2O15409 715 aa21.81■■□□□ 1.08
HMGN1-207ENST00000436324 FLOT1O75955 427 aa21.81■■□□□ 1.08
HMGN1-207ENST00000436324 NMIQ13287 307 aaPredicted RBP21.81■■□□□ 1.08
HMGN1-207ENST00000436324 LBX2Q6XYB7 198 aa21.81■■□□□ 1.08
HMGN1-207ENST00000436324 GOPCQ9HD26 462 aa21.81■■□□□ 1.08
HMGN1-207ENST00000436324 WDR46O15213 610 aaKnown RBP21.8■■□□□ 1.08
HMGN1-207ENST00000436324 SLC3A2P08195 630 aaKnown RBP21.8■■□□□ 1.08
HMGN1-207ENST00000436324 CTDSPL2Q05D32 466 aa21.8■■□□□ 1.08
HMGN1-207ENST00000436324 PDE4BQ07343 736 aa21.8■■□□□ 1.08
HMGN1-207ENST00000436324 TRIM32Q13049 653 aa21.8■■□□□ 1.08
HMGN1-207ENST00000436324 MCMDC2Q4G0Z9 681 aa21.8■■□□□ 1.08
HMGN1-207ENST00000436324 FAM47AQ5JRC9 791 aa21.8■■□□□ 1.08
HMGN1-207ENST00000436324 CLIP2Q9UDT6 1046 aa21.8■■□□□ 1.08
HMGN1-207ENST00000436324 GJB1P08034 283 aa21.79■■□□□ 1.08
HMGN1-207ENST00000436324 DSG3P32926 999 aa21.79■■□□□ 1.08
HMGN1-207ENST00000436324 SOCS4Q8WXH5 440 aa21.79■■□□□ 1.08
HMGN1-207ENST00000436324 SHISA4Q96DD7 197 aa21.79■■□□□ 1.08
HMGN1-207ENST00000436324 ATG4CQ96DT6 458 aa21.79■■□□□ 1.08
HMGN1-207ENST00000436324 OSBPL3Q9H4L5 887 aa21.79■■□□□ 1.08
HMGN1-207ENST00000436324 INCENPQ9NQS7 918 aa21.79■■□□□ 1.08
HMGN1-207ENST00000436324 FBXO28Q9NVF7 368 aa21.79■■□□□ 1.08
HMGN1-207ENST00000436324 NYAP2Q9P242 653 aa21.79■■□□□ 1.08
HMGN1-207ENST00000436324 HMGCRP04035 888 aa21.78■■□□□ 1.08
HMGN1-207ENST00000436324 PLS1Q14651 629 aa21.78■■□□□ 1.08
HMGN1-207ENST00000436324 MORN1Q5T089 497 aa21.78■■□□□ 1.08
HMGN1-207ENST00000436324 FAM83BQ5T0W9 1011 aa21.78■■□□□ 1.08
HMGN1-207ENST00000436324 ZNF589Q86UQ0 364 aaPredicted RBP21.78■■□□□ 1.08
HMGN1-207ENST00000436324 NUP88Q99567 741 aaPredicted RBP21.78■■□□□ 1.08
HMGN1-207ENST00000436324 RBBP6Q7Z6E9 1792 aaKnown RBP21.78■■□□□ 1.08
HMGN1-207ENST00000436324 IGKV6D-41A0A0C4DH26 115 aa21.77■■□□□ 1.08
HMGN1-207ENST00000436324 TSPY3P0CV98 308 aa21.77■■□□□ 1.08
HMGN1-207ENST00000436324 TSPY8P0CW00 308 aa21.77■■□□□ 1.08
HMGN1-207ENST00000436324 SDSP20132 328 aa21.77■■□□□ 1.08
HMGN1-207ENST00000436324 GJA8P48165 433 aa21.77■■□□□ 1.08
HMGN1-207ENST00000436324 TFAP4Q01664 338 aa21.77■■□□□ 1.08
HMGN1-207ENST00000436324 NKX2-3Q8TAU0 364 aa21.77■■□□□ 1.08
HMGN1-207ENST00000436324 U2AF1L4Q8WU68 220 aaKnown RBP21.77■■□□□ 1.08
HMGN1-207ENST00000436324 TRIB2Q92519 343 aa21.77■■□□□ 1.08
HMGN1-207ENST00000436324 USP6NLQ92738 828 aa21.77■■□□□ 1.08
HMGN1-207ENST00000436324 CEP95Q96GE4 821 aa21.77■■□□□ 1.08
HMGN1-207ENST00000436324 DEFB118Q96PH6 123 aa21.77■■□□□ 1.08
HMGN1-207ENST00000436324 MOV10L1Q9BXT6 1211 aaKnown RBP21.77■■□□□ 1.08
HMGN1-207ENST00000436324 RGS2P41220 211 aa21.76■■□□□ 1.07
HMGN1-207ENST00000436324 CCL14Q16627 93 aa21.76■■□□□ 1.07
HMGN1-207ENST00000436324 SPATC1LQ9H0A9 340 aa21.76■■□□□ 1.07
HMGN1-207ENST00000436324 MTMR4Q9NYA4 1195 aa21.76■■□□□ 1.07
HMGN1-207ENST00000436324 IVNS1ABPQ9Y6Y0 642 aa21.76■■□□□ 1.07
HMGN1-207ENST00000436324 F5H6K3 240 aa21.75■■□□□ 1.07
HMGN1-207ENST00000436324 SGPL1O95470 568 aa21.75■■□□□ 1.07
HMGN1-207ENST00000436324 NDUFB10O96000 172 aa21.75■■□□□ 1.07
HMGN1-207ENST00000436324 TFRCP02786 760 aaKnown RBP21.75■■□□□ 1.07
HMGN1-207ENST00000436324 ZKSCAN1P17029 563 aaPredicted RBP21.75■■□□□ 1.07
HMGN1-207ENST00000436324 PTPREP23469 700 aa21.75■■□□□ 1.07
HMGN1-207ENST00000436324 PDE4AP27815 886 aa21.75■■□□□ 1.07
HMGN1-207ENST00000436324 KLRC3Q07444 240 aa21.75■■□□□ 1.07
HMGN1-207ENST00000436324 MAP2K5Q13163 448 aa21.75■■□□□ 1.07
HMGN1-207ENST00000436324 ALX1Q15699 326 aa21.75■■□□□ 1.07
HMGN1-207ENST00000436324 LRRC47Q8N1G4 583 aaKnown RBP21.75■■□□□ 1.07
HMGN1-207ENST00000436324 MB21D1Q8N884 522 aa21.75■■□□□ 1.07
HMGN1-207ENST00000436324 NEDD1Q8NHV4 660 aa21.75■■□□□ 1.07
HMGN1-207ENST00000436324 XRN2Q9H0D6 950 aaKnown RBP eCLIP21.75■■□□□ 1.074e-10■■■■□ 24
HMGN1-207ENST00000436324 TACC3Q9Y6A5 838 aa21.75■■□□□ 1.07
HMGN1-207ENST00000436324 PLXNB2O15031 1838 aa21.74■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms