RNA–Protein interactions for RNA: ENST00000428413.5

SCAP-206, Transcript of SREBF chaperone, humanhuman

TSL 5 BASIC

Gene SCAP, Length 3,749 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAP-206ENST00000428413 KCTD19Q17RG1 926 aaPredicted RBP17.01■□□□□ 0.31
SCAP-206ENST00000428413 NBPF11Q86T75 865 aa17.01■□□□□ 0.31
SCAP-206ENST00000428413 LRRC47Q8N1G4 583 aaKnown RBP17.01■□□□□ 0.31
SCAP-206ENST00000428413 PNMA1Q8ND90 353 aa17.01■□□□□ 0.31
SCAP-206ENST00000428413 RGS22Q8NE09 1264 aa17.01■□□□□ 0.31
SCAP-206ENST00000428413 TCP11L1Q9NUJ3 509 aa17.01■□□□□ 0.31
SCAP-206ENST00000428413 KIF2AO00139 706 aaPredicted RBP17■□□□□ 0.31
SCAP-206ENST00000428413 UFL1O94874 794 aa17■□□□□ 0.31
SCAP-206ENST00000428413 TECP42680 631 aa17■□□□□ 0.31
SCAP-206ENST00000428413 CACNB1Q02641 598 aaPredicted RBP17■□□□□ 0.31
SCAP-206ENST00000428413 SRRTQ9BXP5 876 aaKnown RBP17■□□□□ 0.31
SCAP-206ENST00000428413 PPP1R1BQ9UD71 204 aaPredicted RBP17■□□□□ 0.31
SCAP-206ENST00000428413 RTCBQ9Y3I0 505 aaKnown RBP17■□□□□ 0.31
SCAP-206ENST00000428413 A0A0U1RQJ8 604 aa17■□□□□ 0.31
SCAP-206ENST00000428413 KIF5BP33176 963 aa17■□□□□ 0.31
SCAP-206ENST00000428413 TBC1D9BQ66K14 1250 aa17■□□□□ 0.31
SCAP-206ENST00000428413 ATRIPQ8WXE1 791 aa17■□□□□ 0.31
SCAP-206ENST00000428413 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17■□□□□ 0.318e-7■■■■■ 58.6
SCAP-206ENST00000428413 CUL4BQ13620 913 aa17■□□□□ 0.31
SCAP-206ENST00000428413 NELFBQ8WX92 580 aa17■□□□□ 0.31
SCAP-206ENST00000428413 KANSL2Q9H9L4 492 aa17■□□□□ 0.31
SCAP-206ENST00000428413 TNS3Q68CZ2 1445 aa17■□□□□ 0.31
SCAP-206ENST00000428413 GJA10Q969M2 543 aa16.99■□□□□ 0.31
SCAP-206ENST00000428413 ARID4AP29374 1257 aaPredicted RBP16.99■□□□□ 0.31
SCAP-206ENST00000428413 BMS1Q14692 1282 aaKnown RBP16.99■□□□□ 0.31
SCAP-206ENST00000428413 TEX11Q8IYF3 940 aa16.99■□□□□ 0.31
SCAP-206ENST00000428413 NEK11Q8NG66 645 aa16.99■□□□□ 0.31
SCAP-206ENST00000428413 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.99■□□□□ 0.31
SCAP-206ENST00000428413 MINPP1Q9UNW1 487 aa16.99■□□□□ 0.31
SCAP-206ENST00000428413 FAM196BA6NMK8 535 aa16.99■□□□□ 0.31
SCAP-206ENST00000428413 TOB1P50616 345 aaPredicted RBP16.99■□□□□ 0.31
SCAP-206ENST00000428413 ALDH8A1Q9H2A2 487 aaPredicted RBP16.98■□□□□ 0.31
SCAP-206ENST00000428413 FAM207AQ9NSI2 230 aaPredicted RBP16.98■□□□□ 0.31
SCAP-206ENST00000428413 SLURP2P0DP57 97 aa16.98■□□□□ 0.31
SCAP-206ENST00000428413 MLKLQ8NB16 471 aa16.98■□□□□ 0.31
SCAP-206ENST00000428413 CRACR2AQ9BSW2 395 aa16.98■□□□□ 0.31
SCAP-206ENST00000428413 CPDO75976 1380 aa16.98■□□□□ 0.31
SCAP-206ENST00000428413 PDE4DQ08499 809 aa16.98■□□□□ 0.31
SCAP-206ENST00000428413 TCERG1LQ5VWI1 586 aa16.98■□□□□ 0.31
SCAP-206ENST00000428413 RESP18Q5W5W9 173 aa16.98■□□□□ 0.31
SCAP-206ENST00000428413 ARFGAP3Q9NP61 516 aa16.98■□□□□ 0.31
SCAP-206ENST00000428413 REREQ9P2R6 1566 aa16.98■□□□□ 0.31
SCAP-206ENST00000428413 UBAP1LF5GYI3 381 aa16.97■□□□□ 0.31
SCAP-206ENST00000428413 LRRC41Q15345 812 aa16.97■□□□□ 0.31
SCAP-206ENST00000428413 DOK7Q18PE1 504 aa16.97■□□□□ 0.31
SCAP-206ENST00000428413 KANK3Q6NY19 840 aa16.97■□□□□ 0.31
SCAP-206ENST00000428413 CACNA2D4Q7Z3S7 1137 aa16.97■□□□□ 0.31
SCAP-206ENST00000428413 SLC39A2Q9NP94 309 aa16.97■□□□□ 0.31
SCAP-206ENST00000428413 FAM217BQ9NTX9 383 aaPredicted RBP16.97■□□□□ 0.31
SCAP-206ENST00000428413 WNT7AO00755 349 aa16.97■□□□□ 0.31
SCAP-206ENST00000428413 ARHGAP6O43182 974 aa16.97■□□□□ 0.31
SCAP-206ENST00000428413 BAG3O95817 575 aa16.97■□□□□ 0.31
SCAP-206ENST00000428413 SLC16A2P36021 539 aa16.97■□□□□ 0.31
SCAP-206ENST00000428413 CLCN6P51797 869 aa16.97■□□□□ 0.31
SCAP-206ENST00000428413 CACNB3P54284 484 aa16.97■□□□□ 0.31
SCAP-206ENST00000428413 CYP27A1Q02318 531 aa16.97■□□□□ 0.31
SCAP-206ENST00000428413 PARP10Q53GL7 1025 aa16.97■□□□□ 0.31
SCAP-206ENST00000428413 FAM84BQ96KN1 310 aaPredicted RBP16.97■□□□□ 0.31
SCAP-206ENST00000428413 SF3A3Q12874 501 aaKnown RBP eCLIP16.97■□□□□ 0.312e-8■■■■■ 52.3
SCAP-206ENST00000428413 NELFCDQ8IXH7 590 aa16.97■□□□□ 0.31
SCAP-206ENST00000428413 MARCH10Q8NA82 808 aaPredicted RBP16.97■□□□□ 0.31
SCAP-206ENST00000428413 SEPT11Q9NVA2 429 aaKnown RBP16.97■□□□□ 0.31
SCAP-206ENST00000428413 GTF2IP78347 998 aa16.96■□□□□ 0.31
SCAP-206ENST00000428413 TBC1D8BQ0IIM8 1120 aa16.96■□□□□ 0.31
SCAP-206ENST00000428413 IMPACTQ9P2X3 320 aa16.96■□□□□ 0.31
SCAP-206ENST00000428413 ANKRD65E5RJM6 399 aa16.96■□□□□ 0.31
SCAP-206ENST00000428413 PPP6R2O75170 966 aa16.96■□□□□ 0.31
SCAP-206ENST00000428413 SCG2P13521 617 aa16.96■□□□□ 0.31
SCAP-206ENST00000428413 GTF2A1P52655 376 aaPredicted RBP16.96■□□□□ 0.31
SCAP-206ENST00000428413 SNAP25P60880 206 aa16.96■□□□□ 0.31
SCAP-206ENST00000428413 SRBD1Q8N5C6 995 aaKnown RBP16.96■□□□□ 0.31
SCAP-206ENST00000428413 COA7Q96BR5 231 aa16.96■□□□□ 0.31
SCAP-206ENST00000428413 PAGE5Q96GU1 130 aa16.96■□□□□ 0.31
SCAP-206ENST00000428413 EXOC1Q9NV70 894 aa16.96■□□□□ 0.31
SCAP-206ENST00000428413 AKR1B10O60218 316 aa16.96■□□□□ 0.31
SCAP-206ENST00000428413 PTPREP23469 700 aa16.96■□□□□ 0.31
SCAP-206ENST00000428413 LIFRP42702 1097 aa16.96■□□□□ 0.31
SCAP-206ENST00000428413 CCDC122Q5T0U0 273 aa16.96■□□□□ 0.31
SCAP-206ENST00000428413 SARM1Q6SZW1 724 aa16.96■□□□□ 0.31
SCAP-206ENST00000428413 VSTM4Q8IW00 320 aa16.96■□□□□ 0.31
SCAP-206ENST00000428413 NLRC4Q9NPP4 1024 aa16.96■□□□□ 0.31
SCAP-206ENST00000428413 VPS18Q9P253 973 aa16.96■□□□□ 0.31
SCAP-206ENST00000428413 TACC3Q9Y6A5 838 aa16.96■□□□□ 0.31
SCAP-206ENST00000428413 LMTK3Q96Q04 1460 aa16.96■□□□□ 0.3
SCAP-206ENST00000428413 IBSPP21815 317 aaPredicted RBP16.95■□□□□ 0.3
SCAP-206ENST00000428413 CSGALNACT2Q8N6G5 542 aa16.95■□□□□ 0.3
SCAP-206ENST00000428413 GPATCH11Q8N954 259 aa16.95■□□□□ 0.3
SCAP-206ENST00000428413 SRGAP2O75044 1071 aa16.95■□□□□ 0.3
SCAP-206ENST00000428413 GPS2Q13227 327 aa16.95■□□□□ 0.3
SCAP-206ENST00000428413 NCAPHQ15003 741 aa16.95■□□□□ 0.3
SCAP-206ENST00000428413 CCDC181Q5TID7 509 aa16.95■□□□□ 0.3
SCAP-206ENST00000428413 NWD1Q149M9 1564 aa16.95■□□□□ 0.3
SCAP-206ENST00000428413 KLRF2D3W0D1 207 aa16.95■□□□□ 0.3
SCAP-206ENST00000428413 PAK1Q13153 545 aa16.95■□□□□ 0.3
SCAP-206ENST00000428413 PLS1Q14651 629 aa16.95■□□□□ 0.3
SCAP-206ENST00000428413 PTPAQ15257 358 aa16.95■□□□□ 0.3
SCAP-206ENST00000428413 MSL1Q68DK7 614 aa16.95■□□□□ 0.3
SCAP-206ENST00000428413 CTR9Q6PD62 1173 aa16.95■□□□□ 0.3
SCAP-206ENST00000428413 SLC35F6Q8N357 371 aa16.95■□□□□ 0.3
SCAP-206ENST00000428413 SH3RF3Q8TEJ3 882 aaPredicted RBP16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 83.1 ms