RNA–Protein interactions for RNA: ENST00000427563.1

COL9A2-204, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 3

Gene COL9A2, Length 548 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-204ENST00000427563 LBX2Q6XYB7 198 aa22.92■■□□□ 1.26
COL9A2-204ENST00000427563 SLAIN1Q8ND83 568 aa22.92■■□□□ 1.26
COL9A2-204ENST00000427563 COA7Q96BR5 231 aa22.92■■□□□ 1.26
COL9A2-204ENST00000427563 FAM227BQ96M60 508 aa22.92■■□□□ 1.26
COL9A2-204ENST00000427563 PAGR1Q9BTK6 254 aa22.92■■□□□ 1.26
COL9A2-204ENST00000427563 BTBD7Q9P203 1132 aa22.92■■□□□ 1.26
COL9A2-204ENST00000427563 TACC3Q9Y6A5 838 aa22.92■■□□□ 1.26
COL9A2-204ENST00000427563 MYH4Q9Y623 1939 aa22.92■■□□□ 1.26
COL9A2-204ENST00000427563 A0A0D9SFI3 127 aa22.91■■□□□ 1.26
COL9A2-204ENST00000427563 APPP05067 770 aa22.91■■□□□ 1.26
COL9A2-204ENST00000427563 OSBPL3Q9H4L5 887 aa22.91■■□□□ 1.26
COL9A2-204ENST00000427563 VCPKMTQ9H867 229 aa22.91■■□□□ 1.26
COL9A2-204ENST00000427563 RABGAP1Q9Y3P9 1069 aa22.91■■□□□ 1.26
COL9A2-204ENST00000427563 IGKV6D-41A0A0C4DH26 115 aa22.9■■□□□ 1.26
COL9A2-204ENST00000427563 PRDM1O75626 825 aa22.9■■□□□ 1.26
COL9A2-204ENST00000427563 SPICE1Q8N0Z3 855 aa22.9■■□□□ 1.26
COL9A2-204ENST00000427563 PXYLP1Q8TE99 480 aa22.9■■□□□ 1.26
COL9A2-204ENST00000427563 GTF3C2Q8WUA4 911 aaPredicted RBP22.9■■□□□ 1.26
COL9A2-204ENST00000427563 SHISA4Q96DD7 197 aa22.9■■□□□ 1.26
COL9A2-204ENST00000427563 TMEM106CQ9BVX2 250 aa22.9■■□□□ 1.26
COL9A2-204ENST00000427563 ARHGEF10LQ9HCE6 1279 aa22.9■■□□□ 1.26
COL9A2-204ENST00000427563 COL11A1P12107 1806 aaPredicted RBP22.89■■□□□ 1.26
COL9A2-204ENST00000427563 CCL5P13501 91 aa22.89■■□□□ 1.25
COL9A2-204ENST00000427563 PDE4AP27815 886 aa22.89■■□□□ 1.25
COL9A2-204ENST00000427563 KANSL2Q9H9L4 492 aa22.89■■□□□ 1.25
COL9A2-204ENST00000427563 INHAP05111 366 aa22.88■■□□□ 1.25
COL9A2-204ENST00000427563 ZNF589Q86UQ0 364 aaPredicted RBP22.88■■□□□ 1.25
COL9A2-204ENST00000427563 USP6NLQ92738 828 aa22.88■■□□□ 1.25
COL9A2-204ENST00000427563 UNC93B1Q9H1C4 597 aa22.88■■□□□ 1.25
COL9A2-204ENST00000427563 HELLSQ9NRZ9 838 aa22.88■■□□□ 1.25
COL9A2-204ENST00000427563 PPARAQ07869 468 aa22.87■■□□□ 1.25
COL9A2-204ENST00000427563 TRIM32Q13049 653 aa22.87■■□□□ 1.25
COL9A2-204ENST00000427563 NMIQ13287 307 aaPredicted RBP22.87■■□□□ 1.25
COL9A2-204ENST00000427563 GPR142Q7Z601 462 aa22.87■■□□□ 1.25
COL9A2-204ENST00000427563 LPAR1Q92633 364 aa22.87■■□□□ 1.25
COL9A2-204ENST00000427563 NAPBQ9H115 298 aa22.87■■□□□ 1.25
COL9A2-204ENST00000427563 MKNK2Q9HBH9 465 aa22.87■■□□□ 1.25
COL9A2-204ENST00000427563 INCENPQ9NQS7 918 aa22.87■■□□□ 1.25
COL9A2-204ENST00000427563 TRIM6-TRIM34B2RNG4 842 aa22.86■■□□□ 1.25
COL9A2-204ENST00000427563 ATP2B2Q01814 1243 aa22.86■■□□□ 1.25
COL9A2-204ENST00000427563 COG2Q14746 738 aa22.86■■□□□ 1.25
COL9A2-204ENST00000427563 MORN1Q5T089 497 aa22.86■■□□□ 1.25
COL9A2-204ENST00000427563 TRIB2Q92519 343 aa22.86■■□□□ 1.25
COL9A2-204ENST00000427563 RILPL2Q969X0 211 aa22.86■■□□□ 1.25
COL9A2-204ENST00000427563 NACAP1Q9BZK3 213 aa22.86■■□□□ 1.25
COL9A2-204ENST00000427563 TANGO6Q9C0B7 1094 aa22.86■■□□□ 1.25
COL9A2-204ENST00000427563 DDX52Q9Y2R4 599 aaKnown RBP eCLIP22.86■■□□□ 1.25
COL9A2-204ENST00000427563 MAPK4P31152 587 aa22.85■■□□□ 1.25
COL9A2-204ENST00000427563 DSG3P32926 999 aa22.85■■□□□ 1.25
COL9A2-204ENST00000427563 MCMDC2Q4G0Z9 681 aa22.85■■□□□ 1.25
COL9A2-204ENST00000427563 NYAP2Q9P242 653 aa22.85■■□□□ 1.25
COL9A2-204ENST00000427563 BIN2Q9UBW5 565 aaPredicted RBP22.85■■□□□ 1.25
COL9A2-204ENST00000427563 PLIN4Q96Q06 1357 aa22.85■■□□□ 1.25
COL9A2-204ENST00000427563 WDR46O15213 610 aaKnown RBP22.84■■□□□ 1.25
COL9A2-204ENST00000427563 CYP2B6P20813 491 aa22.84■■□□□ 1.25
COL9A2-204ENST00000427563 UBXN2AP68543 259 aa22.84■■□□□ 1.25
COL9A2-204ENST00000427563 CTDSPL2Q05D32 466 aa22.84■■□□□ 1.25
COL9A2-204ENST00000427563 PLEKHH3Q7Z736 793 aa22.84■■□□□ 1.25
COL9A2-204ENST00000427563 TICAM2Q86XR7 235 aa22.84■■□□□ 1.25
COL9A2-204ENST00000427563 ATG4CQ96DT6 458 aa22.84■■□□□ 1.25
COL9A2-204ENST00000427563 RNF208Q9H0X6 261 aa22.84■■□□□ 1.25
COL9A2-204ENST00000427563 SH2D4AQ9H788 454 aa22.84■■□□□ 1.25
COL9A2-204ENST00000427563 FBXO28Q9NVF7 368 aa22.84■■□□□ 1.25
COL9A2-204ENST00000427563 GJB1P08034 283 aa22.83■■□□□ 1.25
COL9A2-204ENST00000427563 SDSP20132 328 aa22.83■■□□□ 1.25
COL9A2-204ENST00000427563 GJA8P48165 433 aa22.83■■□□□ 1.25
COL9A2-204ENST00000427563 ALX1Q15699 326 aa22.83■■□□□ 1.25
COL9A2-204ENST00000427563 FAM47AQ5JRC9 791 aa22.83■■□□□ 1.25
COL9A2-204ENST00000427563 CEP95Q96GE4 821 aa22.83■■□□□ 1.25
COL9A2-204ENST00000427563 NUDT12Q9BQG2 462 aa22.83■■□□□ 1.25
COL9A2-204ENST00000427563 HOXC10Q9NYD6 342 aa22.83■■□□□ 1.25
COL9A2-204ENST00000427563 FLOT1O75955 427 aa22.82■■□□□ 1.24
COL9A2-204ENST00000427563 FAM83BQ5T0W9 1011 aa22.82■■□□□ 1.24
COL9A2-204ENST00000427563 ZNF444Q8N0Y2 327 aaPredicted RBP22.82■■□□□ 1.24
COL9A2-204ENST00000427563 NEDD1Q8NHV4 660 aa22.82■■□□□ 1.24
COL9A2-204ENST00000427563 NUP88Q99567 741 aaPredicted RBP22.82■■□□□ 1.24
COL9A2-204ENST00000427563 MOV10L1Q9BXT6 1211 aaKnown RBP22.82■■□□□ 1.24
COL9A2-204ENST00000427563 PAK6Q9NQU5 681 aaPredicted RBP22.82■■□□□ 1.24
COL9A2-204ENST00000427563 MTMR4Q9NYA4 1195 aa22.82■■□□□ 1.24
COL9A2-204ENST00000427563 ANAPC4Q9UJX5 808 aa22.82■■□□□ 1.24
COL9A2-204ENST00000427563 ADAMTS5Q9UNA0 930 aa22.82■■□□□ 1.24
COL9A2-204ENST00000427563 ZNF236Q9UL36 1845 aa22.82■■□□□ 1.24
COL9A2-204ENST00000427563 FGAP02671 866 aa22.81■■□□□ 1.24
COL9A2-204ENST00000427563 CENPBP07199 599 aaPredicted RBP22.81■■□□□ 1.24
COL9A2-204ENST00000427563 HSPD1P10809 573 aaKnown RBP22.81■■□□□ 1.24
COL9A2-204ENST00000427563 CCL14Q16627 93 aa22.81■■□□□ 1.24
COL9A2-204ENST00000427563 UBE2Q1Q7Z7E8 422 aa22.81■■□□□ 1.24
COL9A2-204ENST00000427563 SOCS4Q8WXH5 440 aa22.81■■□□□ 1.24
COL9A2-204ENST00000427563 CLIP2Q9UDT6 1046 aa22.81■■□□□ 1.24
COL9A2-204ENST00000427563 CCDC171Q6TFL3 1326 aa22.81■■□□□ 1.24
COL9A2-204ENST00000427563 NDUFB10O96000 172 aa22.8■■□□□ 1.24
COL9A2-204ENST00000427563 HMGCRP04035 888 aa22.8■■□□□ 1.24
COL9A2-204ENST00000427563 XRCC5P13010 732 aaKnown RBP22.8■■□□□ 1.24
COL9A2-204ENST00000427563 GSPT1P15170 499 aaKnown RBP22.8■■□□□ 1.24
COL9A2-204ENST00000427563 PTPREP23469 700 aa22.8■■□□□ 1.24
COL9A2-204ENST00000427563 TFAP4Q01664 338 aa22.8■■□□□ 1.24
COL9A2-204ENST00000427563 PDE4BQ07343 736 aa22.8■■□□□ 1.24
COL9A2-204ENST00000427563 MAP3K21Q5TCX8 1036 aa22.8■■□□□ 1.24
COL9A2-204ENST00000427563 NKX2-3Q8TAU0 364 aa22.8■■□□□ 1.24
COL9A2-204ENST00000427563 MKL1Q969V6 931 aa22.8■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms