RNA–Protein interactions for RNA: ENST00000426248.7

PKP4-205, Transcript of plakophilin 4, humanhuman

TSL 1 (best)

Gene PKP4, Length 4,134 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-205ENST00000426248 CATIPQ7Z7H3 387 aa18.07■□□□□ 0.48
PKP4-205ENST00000426248 CNNM3Q8NE01 707 aa18.07■□□□□ 0.48
PKP4-205ENST00000426248 JPH2Q9BR39 696 aaPredicted RBP18.07■□□□□ 0.48
PKP4-205ENST00000426248 NEBLO76041 1014 aa18.07■□□□□ 0.48
PKP4-205ENST00000426248 IARSP41252 1262 aaKnown RBP18.07■□□□□ 0.48
PKP4-205ENST00000426248 TBC1D22AQ8WUA7 517 aa18.07■□□□□ 0.48
PKP4-205ENST00000426248 ZNF287Q9HBT7 754 aa18.07■□□□□ 0.48
PKP4-205ENST00000426248 TOP1P11387 765 aaKnown RBP18.06■□□□□ 0.48
PKP4-205ENST00000426248 BTDP43251 543 aa18.06■□□□□ 0.48
PKP4-205ENST00000426248 HDXQ7Z353 690 aa18.06■□□□□ 0.48
PKP4-205ENST00000426248 CTCFLQ8NI51 663 aaPredicted RBP18.06■□□□□ 0.48
PKP4-205ENST00000426248 ANGEL1Q9UNK9 670 aaKnown RBP18.06■□□□□ 0.48
PKP4-205ENST00000426248 AFDNP55196 1824 aaKnown RBP18.06■□□□□ 0.48
PKP4-205ENST00000426248 PTPDC1A2A3K4 754 aa18.06■□□□□ 0.48
PKP4-205ENST00000426248 VEZTQ9HBM0 779 aa18.06■□□□□ 0.48
PKP4-205ENST00000426248 ECM2O94769 699 aaPredicted RBP18.06■□□□□ 0.48
PKP4-205ENST00000426248 KIAA0754O94854 1291 aa18.06■□□□□ 0.48
PKP4-205ENST00000426248 KIF4BQ2VIQ3 1234 aa18.06■□□□□ 0.48
PKP4-205ENST00000426248 COL22A1Q8NFW1 1626 aaPredicted RBP18.06■□□□□ 0.48
PKP4-205ENST00000426248 CDC25BP30305 580 aa18.05■□□□□ 0.48
PKP4-205ENST00000426248 SLC24A3Q9HC58 644 aa18.05■□□□□ 0.48
PKP4-205ENST00000426248 CRAMP1Q96RY5 1269 aa18.05■□□□□ 0.48
PKP4-205ENST00000426248 TTLL6Q8N841 843 aa18.05■□□□□ 0.48
PKP4-205ENST00000426248 GDAP1L1Q96MZ0 367 aa18.05■□□□□ 0.48
PKP4-205ENST00000426248 MKRN1Q9UHC7 482 aaKnown RBP18.05■□□□□ 0.48
PKP4-205ENST00000426248 H3BQF6 201 aa18.04■□□□□ 0.48
PKP4-205ENST00000426248 PLCG2P16885 1265 aa18.04■□□□□ 0.48
PKP4-205ENST00000426248 XBP1P17861 261 aa18.04■□□□□ 0.48
PKP4-205ENST00000426248 TADA2BQ86TJ2 420 aa18.04■□□□□ 0.48
PKP4-205ENST00000426248 VAT1LQ9HCJ6 419 aa18.04■□□□□ 0.48
PKP4-205ENST00000426248 CRYBG1Q9Y4K1 1723 aa18.04■□□□□ 0.48
PKP4-205ENST00000426248 TADA3O75528 432 aa18.04■□□□□ 0.48
PKP4-205ENST00000426248 WDHD1O75717 1129 aaPredicted RBP18.04■□□□□ 0.48
PKP4-205ENST00000426248 RAD17O75943 681 aa18.04■□□□□ 0.48
PKP4-205ENST00000426248 OTUD7BQ6GQQ9 843 aa18.04■□□□□ 0.48
PKP4-205ENST00000426248 STOX1Q6ZVD7 989 aa18.04■□□□□ 0.48
PKP4-205ENST00000426248 TMC4Q7Z404 712 aa18.04■□□□□ 0.48
PKP4-205ENST00000426248 FBXO33Q7Z6M2 555 aa18.04■□□□□ 0.48
PKP4-205ENST00000426248 TM4SF1P30408 202 aa18.04■□□□□ 0.48
PKP4-205ENST00000426248 NF2P35240 595 aa18.04■□□□□ 0.48
PKP4-205ENST00000426248 SP8Q8IXZ3 490 aa18.04■□□□□ 0.48
PKP4-205ENST00000426248 LZTFL1Q9NQ48 299 aa18.04■□□□□ 0.48
PKP4-205ENST00000426248 RIC1Q4ADV7 1423 aa18.04■□□□□ 0.48
PKP4-205ENST00000426248 MED23Q9ULK4 1368 aa18.04■□□□□ 0.48
PKP4-205ENST00000426248 EBAG9O00559 213 aa18.04■□□□□ 0.48
PKP4-205ENST00000426248 CTAGE5O15320 804 aa18.04■□□□□ 0.48
PKP4-205ENST00000426248 N4BP1O75113 896 aaKnown RBP18.04■□□□□ 0.48
PKP4-205ENST00000426248 ZRANB2O95218 330 aaKnown RBP eCLIP18.04■□□□□ 0.483e-7■■■■□ 25.7
PKP4-205ENST00000426248 MXD3Q9BW11 206 aa18.04■□□□□ 0.48
PKP4-205ENST00000426248 KAT14Q9H8E8 782 aa18.04■□□□□ 0.48
PKP4-205ENST00000426248 L2HGDHQ9H9P8 463 aa18.04■□□□□ 0.48
PKP4-205ENST00000426248 ATP6V0A2Q9Y487 856 aa18.04■□□□□ 0.48
PKP4-205ENST00000426248 GJA3Q9Y6H8 435 aa18.04■□□□□ 0.48
PKP4-205ENST00000426248 CCDC196A0A1B0GTZ2 297 aa18.03■□□□□ 0.48
PKP4-205ENST00000426248 FRMD3A2A2Y4 597 aa18.03■□□□□ 0.48
PKP4-205ENST00000426248 USP17L8P0C7I0 530 aa18.03■□□□□ 0.48
PKP4-205ENST00000426248 SRGNP10124 158 aa18.03■□□□□ 0.48
PKP4-205ENST00000426248 RTN1Q16799 776 aa18.03■□□□□ 0.48
PKP4-205ENST00000426248 CEP57Q86XR8 500 aa18.03■□□□□ 0.48
PKP4-205ENST00000426248 PDGFDQ9GZP0 370 aaPredicted RBP18.03■□□□□ 0.48
PKP4-205ENST00000426248 USP40Q9NVE5 1235 aa18.03■□□□□ 0.48
PKP4-205ENST00000426248 POLLQ9UGP5 575 aa18.03■□□□□ 0.48
PKP4-205ENST00000426248 ATP8B1O43520 1251 aa18.03■□□□□ 0.48
PKP4-205ENST00000426248 MMP14P50281 582 aa18.03■□□□□ 0.48
PKP4-205ENST00000426248 EIF6P56537 245 aaKnown RBP18.03■□□□□ 0.48
PKP4-205ENST00000426248 EFCAB13Q8IY85 973 aa18.03■□□□□ 0.48
PKP4-205ENST00000426248 CMTR1Q8N1G2 835 aaKnown RBP18.03■□□□□ 0.48
PKP4-205ENST00000426248 FAM204AQ9H8W3 233 aa18.03■□□□□ 0.48
PKP4-205ENST00000426248 HLA-DOAP06340 250 aa18.03■□□□□ 0.48
PKP4-205ENST00000426248 UBASH3AP57075 661 aa18.03■□□□□ 0.48
PKP4-205ENST00000426248 STK38Q15208 465 aa18.03■□□□□ 0.48
PKP4-205ENST00000426248 AOC3Q16853 763 aa18.03■□□□□ 0.48
PKP4-205ENST00000426248 FBXW10Q5XX13 1052 aa18.03■□□□□ 0.48
PKP4-205ENST00000426248 FAM53CQ9NYF3 392 aa18.03■□□□□ 0.48
PKP4-205ENST00000426248 SSRP1Q08945 709 aaKnown RBP18.02■□□□□ 0.48
PKP4-205ENST00000426248 PHKBQ93100 1093 aa18.02■□□□□ 0.48
PKP4-205ENST00000426248 ITGB4P16144 1822 aa18.02■□□□□ 0.48
PKP4-205ENST00000426248 CHMP4BP1P59074 171 aa18.02■□□□□ 0.48
PKP4-205ENST00000426248 TBC1D10CQ8IV04 446 aa18.02■□□□□ 0.48
PKP4-205ENST00000426248 PNPLA7Q6ZV29 1317 aa18.02■□□□□ 0.47
PKP4-205ENST00000426248 ADD1P35611 737 aaKnown RBP18.02■□□□□ 0.47
PKP4-205ENST00000426248 CCT5P48643 541 aa18.02■□□□□ 0.47
PKP4-205ENST00000426248 ZNF512BQ96KM6 892 aaPredicted RBP18.02■□□□□ 0.47
PKP4-205ENST00000426248 FAM107BQ9H098 131 aa18.02■□□□□ 0.47
PKP4-205ENST00000426248 BCCIPQ9P287 314 aaKnown RBP eCLIP18.02■□□□□ 0.47
PKP4-205ENST00000426248 SHTN1A0MZ66 631 aa18.01■□□□□ 0.47
PKP4-205ENST00000426248 GSG1L2A8MUP6 293 aa18.01■□□□□ 0.47
PKP4-205ENST00000426248 REXO1L1PQ8IX06 675 aa18.01■□□□□ 0.47
PKP4-205ENST00000426248 TEKT1Q969V4 418 aa18.01■□□□□ 0.47
PKP4-205ENST00000426248 FTOQ9C0B1 505 aaKnown RBP eCLIP18.01■□□□□ 0.473e-6■□□□□ 11.1
PKP4-205ENST00000426248 TCHHQ07283 1943 aa18.01■□□□□ 0.47
PKP4-205ENST00000426248 CYP2D6P10635 497 aa18.01■□□□□ 0.47
PKP4-205ENST00000426248 hCG_1642624A0A1W2PR95 340 aa18.01■□□□□ 0.47
PKP4-205ENST00000426248 NSUN4Q96CB9 384 aaKnown RBP18.01■□□□□ 0.47
PKP4-205ENST00000426248 ALG1Q9BT22 464 aa18.01■□□□□ 0.47
PKP4-205ENST00000426248 COA1Q9GZY4 146 aa18.01■□□□□ 0.47
PKP4-205ENST00000426248 SUGCTQ9HAC7 445 aa18.01■□□□□ 0.47
PKP4-205ENST00000426248 ZSWIM5Q9P217 1185 aa18.01■□□□□ 0.47
PKP4-205ENST00000426248 TFAP4Q01664 338 aa18■□□□□ 0.47
PKP4-205ENST00000426248 RNF187Q5TA31 235 aaPredicted RBP18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms