RNA–Protein interactions for RNA: ENST00000424438.5

RPUSD3-204, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2 BASIC

Gene RPUSD3, Length 1,005 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-204ENST00000424438 PRUNE2Q8WUY3 3088 aa18.96■□□□□ 0.63
RPUSD3-204ENST00000424438 NAV1Q8NEY1 1877 aa18.95■□□□□ 0.62
RPUSD3-204ENST00000424438 GUCY1A2P33402 732 aa18.95■□□□□ 0.62
RPUSD3-204ENST00000424438 ATN1P54259 1190 aaPredicted RBP18.95■□□□□ 0.62
RPUSD3-204ENST00000424438 SHHQ15465 462 aa18.95■□□□□ 0.62
RPUSD3-204ENST00000424438 ZYXQ15942 572 aaKnown RBP18.95■□□□□ 0.62
RPUSD3-204ENST00000424438 MOV10L1Q9BXT6 1211 aaKnown RBP18.95■□□□□ 0.62
RPUSD3-204ENST00000424438 PARP14Q460N5 1801 aa18.95■□□□□ 0.62
RPUSD3-204ENST00000424438 ROBO3Q96MS0 1386 aa18.94■□□□□ 0.62
RPUSD3-204ENST00000424438 ZNFX1Q9P2E3 1918 aaKnown RBP18.94■□□□□ 0.62
RPUSD3-204ENST00000424438 IDH1O75874 414 aaKnown RBP18.94■□□□□ 0.62
RPUSD3-204ENST00000424438 ADORA2AP29274 412 aa18.94■□□□□ 0.62
RPUSD3-204ENST00000424438 MAP3K12Q12852 859 aa18.94■□□□□ 0.62
RPUSD3-204ENST00000424438 OS9Q13438 667 aaPredicted RBP18.94■□□□□ 0.62
RPUSD3-204ENST00000424438 DPP9Q86TI2 863 aa18.94■□□□□ 0.62
RPUSD3-204ENST00000424438 RIOK1Q9BRS2 568 aaKnown RBP18.94■□□□□ 0.62
RPUSD3-204ENST00000424438 SPATC1LQ9H0A9 340 aa18.94■□□□□ 0.62
RPUSD3-204ENST00000424438 MROH8Q9H579 483 aa18.94■□□□□ 0.62
RPUSD3-204ENST00000424438 SURF6O75683 361 aaKnown RBP18.93■□□□□ 0.62
RPUSD3-204ENST00000424438 TTYH1Q9H313 450 aaPredicted RBP18.93■□□□□ 0.62
RPUSD3-204ENST00000424438 PDLIM7Q9NR12 457 aa18.93■□□□□ 0.62
RPUSD3-204ENST00000424438 ATP11BQ9Y2G3 1177 aa18.93■□□□□ 0.62
RPUSD3-204ENST00000424438 NDUFB9Q9Y6M9 179 aa18.93■□□□□ 0.62
RPUSD3-204ENST00000424438 SMCHD1A6NHR9 2005 aa18.93■□□□□ 0.62
RPUSD3-204ENST00000424438 GJC2Q5T442 439 aaPredicted RBP18.92■□□□□ 0.62
RPUSD3-204ENST00000424438 MAGEB6Q8N7X4 407 aa18.92■□□□□ 0.62
RPUSD3-204ENST00000424438 MIGA1Q8NAN2 632 aa18.92■□□□□ 0.62
RPUSD3-204ENST00000424438 PRDM5Q9NQX1 630 aaPredicted RBP18.92■□□□□ 0.62
RPUSD3-204ENST00000424438 RAPGEFL1Q9UHV5 662 aa18.92■□□□□ 0.62
RPUSD3-204ENST00000424438 MYH8P13535 1937 aa18.92■□□□□ 0.62
RPUSD3-204ENST00000424438 NCOR1O75376 2440 aa18.91■□□□□ 0.62
RPUSD3-204ENST00000424438 ERCC3P19447 782 aa18.91■□□□□ 0.62
RPUSD3-204ENST00000424438 PLCD1P51178 756 aa18.91■□□□□ 0.62
RPUSD3-204ENST00000424438 LRRC41Q15345 812 aa18.91■□□□□ 0.62
RPUSD3-204ENST00000424438 EAF2Q96CJ1 260 aaPredicted RBP18.91■□□□□ 0.62
RPUSD3-204ENST00000424438 PHF24Q9UPV7 400 aa18.91■□□□□ 0.62
RPUSD3-204ENST00000424438 COBLO75128 1261 aa18.9■□□□□ 0.62
RPUSD3-204ENST00000424438 DSG3P32926 999 aa18.9■□□□□ 0.62
RPUSD3-204ENST00000424438 SEPT2Q15019 361 aa18.9■□□□□ 0.62
RPUSD3-204ENST00000424438 TRIM60Q495X7 471 aa18.9■□□□□ 0.62
RPUSD3-204ENST00000424438 C9orf50Q5SZB4 431 aa18.9■□□□□ 0.62
RPUSD3-204ENST00000424438 TMEM179Q6ZVK1 233 aa18.9■□□□□ 0.62
RPUSD3-204ENST00000424438 TMEM57Q8N5G2 664 aa18.9■□□□□ 0.62
RPUSD3-204ENST00000424438 TLR7Q9NYK1 1049 aaKnown RBP18.9■□□□□ 0.62
RPUSD3-204ENST00000424438 TACC3Q9Y6A5 838 aa18.9■□□□□ 0.62
RPUSD3-204ENST00000424438 MUC3AQ02505 3323 aa18.9■□□□□ 0.62
RPUSD3-204ENST00000424438 A0A1W2PRG0 241 aa18.89■□□□□ 0.61
RPUSD3-204ENST00000424438 SLC25A27O95847 323 aa18.89■□□□□ 0.61
RPUSD3-204ENST00000424438 TTF1Q15361 905 aaPredicted RBP18.89■□□□□ 0.61
RPUSD3-204ENST00000424438 ZKSCAN2Q63HK3 967 aa18.89■□□□□ 0.61
RPUSD3-204ENST00000424438 BADQ92934 168 aa18.89■□□□□ 0.61
RPUSD3-204ENST00000424438 MAML3Q96JK9 1138 aa18.89■□□□□ 0.61
RPUSD3-204ENST00000424438 CRNKL1Q9BZJ0 848 aaKnown RBP18.89■□□□□ 0.61
RPUSD3-204ENST00000424438 SH2D4AQ9H788 454 aa18.89■□□□□ 0.61
RPUSD3-204ENST00000424438 SWAP70Q9UH65 585 aa18.89■□□□□ 0.61
RPUSD3-204ENST00000424438 TNNQ9UQP3 1299 aa18.89■□□□□ 0.61
RPUSD3-204ENST00000424438 DIS3Q9Y2L1 958 aaKnown RBP18.89■□□□□ 0.61
RPUSD3-204ENST00000424438 PLXNA1Q9UIW2 1896 aa18.88■□□□□ 0.61
RPUSD3-204ENST00000424438 KIAA0355O15063 1070 aa18.88■□□□□ 0.61
RPUSD3-204ENST00000424438 POLR3DP05423 398 aaPredicted RBP18.88■□□□□ 0.61
RPUSD3-204ENST00000424438 ERC1Q8IUD2 1116 aa18.88■□□□□ 0.61
RPUSD3-204ENST00000424438 CLUAP1Q96AJ1 413 aa18.88■□□□□ 0.61
RPUSD3-204ENST00000424438 TANGO6Q9C0B7 1094 aa18.88■□□□□ 0.61
RPUSD3-204ENST00000424438 CCDC8Q9H0W5 538 aaPredicted RBP18.88■□□□□ 0.61
RPUSD3-204ENST00000424438 ADAMTS5Q9UNA0 930 aa18.88■□□□□ 0.61
RPUSD3-204ENST00000424438 TMX2Q9Y320 296 aa18.88■□□□□ 0.61
RPUSD3-204ENST00000424438 TRIM43BA6NCK2 446 aa18.87■□□□□ 0.61
RPUSD3-204ENST00000424438 BCAR3O75815 825 aa18.87■□□□□ 0.61
RPUSD3-204ENST00000424438 ADCYAP1R1P41586 468 aa18.87■□□□□ 0.61
RPUSD3-204ENST00000424438 FRAT1Q92837 279 aaPredicted RBP18.87■□□□□ 0.61
RPUSD3-204ENST00000424438 TRIM43Q96BQ3 446 aaPredicted RBP18.87■□□□□ 0.61
RPUSD3-204ENST00000424438 ANTXR1Q9H6X2 564 aa18.87■□□□□ 0.61
RPUSD3-204ENST00000424438 CDH23Q9H251 3354 aa18.87■□□□□ 0.61
RPUSD3-204ENST00000424438 MAGEB6P1A0A0J9YX57 407 aa18.86■□□□□ 0.61
RPUSD3-204ENST00000424438 WDR46O15213 610 aaKnown RBP18.86■□□□□ 0.61
RPUSD3-204ENST00000424438 FCER1AP12319 257 aa18.86■□□□□ 0.61
RPUSD3-204ENST00000424438 COPB2P35606 906 aa18.86■□□□□ 0.61
RPUSD3-204ENST00000424438 TLE2Q04725 743 aa18.86■□□□□ 0.61
RPUSD3-204ENST00000424438 FAM47AQ5JRC9 791 aa18.86■□□□□ 0.61
RPUSD3-204ENST00000424438 IL27Q8NEV9 243 aa18.86■□□□□ 0.61
RPUSD3-204ENST00000424438 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.86■□□□□ 0.61
RPUSD3-204ENST00000424438 RNPC3Q96LT9 517 aaKnown RBP18.86■□□□□ 0.61
RPUSD3-204ENST00000424438 CCDC17Q96LX7 622 aa18.86■□□□□ 0.61
RPUSD3-204ENST00000424438 TOX2Q96NM4 488 aa18.86■□□□□ 0.61
RPUSD3-204ENST00000424438 VCPKMTQ9H867 229 aa18.86■□□□□ 0.61
RPUSD3-204ENST00000424438 COL11A1P12107 1806 aaPredicted RBP18.86■□□□□ 0.61
RPUSD3-204ENST00000424438 CLTBP09497 229 aa18.85■□□□□ 0.61
RPUSD3-204ENST00000424438 RARBP10826 455 aa18.85■□□□□ 0.61
RPUSD3-204ENST00000424438 ANKRD33Q7Z3H0 272 aa18.85■□□□□ 0.61
RPUSD3-204ENST00000424438 SH3RF1Q7Z6J0 888 aa18.85■□□□□ 0.61
RPUSD3-204ENST00000424438 RNF180Q86T96 592 aa18.85■□□□□ 0.61
RPUSD3-204ENST00000424438 TSEN34Q9BSV6 310 aaKnown RBP18.85■□□□□ 0.61
RPUSD3-204ENST00000424438 ARHGEF10LQ9HCE6 1279 aa18.85■□□□□ 0.61
RPUSD3-204ENST00000424438 DCP1AQ9NPI6 582 aaPredicted RBP18.85■□□□□ 0.61
RPUSD3-204ENST00000424438 MCM9Q9NXL9 1143 aa18.85■□□□□ 0.61
RPUSD3-204ENST00000424438 CCER2I3L3R5 266 aa18.84■□□□□ 0.61
RPUSD3-204ENST00000424438 FLOT1O75955 427 aa18.84■□□□□ 0.61
RPUSD3-204ENST00000424438 PDE6AP16499 860 aa18.84■□□□□ 0.61
RPUSD3-204ENST00000424438 RIOX2Q8IUF8 465 aa18.84■□□□□ 0.61
RPUSD3-204ENST00000424438 MSL3Q8N5Y2 521 aaKnown RBP18.84■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms