RNA–Protein interactions for RNA: ENST00000418660.1

LINC00404-201, long intergenic non-protein coding RNA 404, humanhuman

TSL 2 BASIC

Gene LINC00404, Length 428 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00404-201ENST00000418660 CCAR1Q8IX12 1150 aaKnown RBP19.67■□□□□ 0.74
LINC00404-201ENST00000418660 STK11IPQ8N1F8 1099 aa19.67■□□□□ 0.74
LINC00404-201ENST00000418660 GNL3Q9BVP2 549 aaKnown RBP eCLIP19.67■□□□□ 0.74
LINC00404-201ENST00000418660 PORCNQ9H237 461 aa19.67■□□□□ 0.74
LINC00404-201ENST00000418660 VCPKMTQ9H867 229 aa19.67■□□□□ 0.74
LINC00404-201ENST00000418660 ZNF287Q9HBT7 754 aa19.67■□□□□ 0.74
LINC00404-201ENST00000418660 HOXC10Q9NYD6 342 aa19.67■□□□□ 0.74
LINC00404-201ENST00000418660 SPDYE16A6NNV3 312 aaPredicted RBP19.66■□□□□ 0.74
LINC00404-201ENST00000418660 INHAP05111 366 aa19.66■□□□□ 0.74
LINC00404-201ENST00000418660 GJB1P08034 283 aa19.66■□□□□ 0.74
LINC00404-201ENST00000418660 CCNA1P78396 465 aa19.66■□□□□ 0.74
LINC00404-201ENST00000418660 TANGO6Q9C0B7 1094 aa19.66■□□□□ 0.74
LINC00404-201ENST00000418660 RNF208Q9H0X6 261 aa19.66■□□□□ 0.74
LINC00404-201ENST00000418660 NAPBQ9H115 298 aa19.66■□□□□ 0.74
LINC00404-201ENST00000418660 ATP2B2Q01814 1243 aa19.65■□□□□ 0.74
LINC00404-201ENST00000418660 GPR142Q7Z601 462 aa19.65■□□□□ 0.74
LINC00404-201ENST00000418660 ZNF444Q8N0Y2 327 aaPredicted RBP19.65■□□□□ 0.74
LINC00404-201ENST00000418660 NKX2-3Q8TAU0 364 aa19.65■□□□□ 0.74
LINC00404-201ENST00000418660 SOCS4Q8WXH5 440 aa19.65■□□□□ 0.74
LINC00404-201ENST00000418660 NUDT12Q9BQG2 462 aa19.65■□□□□ 0.74
LINC00404-201ENST00000418660 OSBPL3Q9H4L5 887 aa19.65■□□□□ 0.74
LINC00404-201ENST00000418660 HELLSQ9NRZ9 838 aa19.65■□□□□ 0.74
LINC00404-201ENST00000418660 BTBD7Q9P203 1132 aa19.65■□□□□ 0.74
LINC00404-201ENST00000418660 WDR46O15213 610 aaKnown RBP19.64■□□□□ 0.73
LINC00404-201ENST00000418660 GJA8P48165 433 aa19.64■□□□□ 0.73
LINC00404-201ENST00000418660 CCDC129Q6ZRS4 1044 aa19.64■□□□□ 0.73
LINC00404-201ENST00000418660 PLEKHH3Q7Z736 793 aa19.64■□□□□ 0.73
LINC00404-201ENST00000418660 PLEKHM2Q8IWE5 1019 aa19.64■□□□□ 0.73
LINC00404-201ENST00000418660 SPICE1Q8N0Z3 855 aa19.64■□□□□ 0.73
LINC00404-201ENST00000418660 UNC93B1Q9H1C4 597 aa19.64■□□□□ 0.73
LINC00404-201ENST00000418660 KIAA0100Q14667 2235 aaKnown RBP19.63■□□□□ 0.73
LINC00404-201ENST00000418660 TRIM6-TRIM34B2RNG4 842 aa19.63■□□□□ 0.73
LINC00404-201ENST00000418660 SLC3A2P08195 630 aaKnown RBP19.63■□□□□ 0.73
LINC00404-201ENST00000418660 XRCC5P13010 732 aaKnown RBP19.63■□□□□ 0.73
LINC00404-201ENST00000418660 CYP2B6P20813 491 aa19.63■□□□□ 0.73
LINC00404-201ENST00000418660 PPARAQ07869 468 aa19.63■□□□□ 0.73
LINC00404-201ENST00000418660 USP6NLQ92738 828 aa19.63■□□□□ 0.73
LINC00404-201ENST00000418660 CWC22Q9HCG8 908 aaKnown RBP19.63■□□□□ 0.73
LINC00404-201ENST00000418660 GOPCQ9HD26 462 aa19.63■□□□□ 0.73
LINC00404-201ENST00000418660 NYAP2Q9P242 653 aa19.63■□□□□ 0.73
LINC00404-201ENST00000418660 FOXP2O15409 715 aa19.62■□□□□ 0.73
LINC00404-201ENST00000418660 PRDM1O75626 825 aa19.62■□□□□ 0.73
LINC00404-201ENST00000418660 FLOT1O75955 427 aa19.62■□□□□ 0.73
LINC00404-201ENST00000418660 HMGCRP04035 888 aa19.62■□□□□ 0.73
LINC00404-201ENST00000418660 DSG3P32926 999 aa19.62■□□□□ 0.73
LINC00404-201ENST00000418660 PDE4BQ07343 736 aa19.62■□□□□ 0.73
LINC00404-201ENST00000418660 MORN1Q5T089 497 aa19.62■□□□□ 0.73
LINC00404-201ENST00000418660 MB21D1Q8N884 522 aa19.62■□□□□ 0.73
LINC00404-201ENST00000418660 RILPL2Q969X0 211 aa19.62■□□□□ 0.73
LINC00404-201ENST00000418660 SHISA4Q96DD7 197 aa19.62■□□□□ 0.73
LINC00404-201ENST00000418660 DOCK3Q8IZD9 2030 aa19.62■□□□□ 0.73
LINC00404-201ENST00000418660 PLXNB2O15031 1838 aa19.62■□□□□ 0.73
LINC00404-201ENST00000418660 CENPFP49454 3210 aa19.62■□□□□ 0.73
LINC00404-201ENST00000418660 GREB1LQ9C091 1923 aaPredicted RBP19.61■□□□□ 0.73
LINC00404-201ENST00000418660 TNRC18O15417 2968 aaPredicted RBP19.61■□□□□ 0.73
LINC00404-201ENST00000418660 IGKV6D-41A0A0C4DH26 115 aa19.61■□□□□ 0.73
LINC00404-201ENST00000418660 CAPN2P17655 700 aa19.61■□□□□ 0.73
LINC00404-201ENST00000418660 MCMDC2Q4G0Z9 681 aa19.61■□□□□ 0.73
LINC00404-201ENST00000418660 TRMT44Q8IYL2 757 aaKnown RBP19.61■□□□□ 0.73
LINC00404-201ENST00000418660 U2AF1L4Q8WU68 220 aaKnown RBP19.61■□□□□ 0.73
LINC00404-201ENST00000418660 FAM227BQ96M60 508 aa19.61■□□□□ 0.73
LINC00404-201ENST00000418660 A0A0D9SFI3 127 aa19.6■□□□□ 0.73
LINC00404-201ENST00000418660 SGPL1O95470 568 aa19.6■□□□□ 0.73
LINC00404-201ENST00000418660 PTPREP23469 700 aa19.6■□□□□ 0.73
LINC00404-201ENST00000418660 RGS2P41220 211 aa19.6■□□□□ 0.73
LINC00404-201ENST00000418660 VPS53Q5VIR6 699 aa19.6■□□□□ 0.73
LINC00404-201ENST00000418660 WDR78Q5VTH9 848 aa19.6■□□□□ 0.73
LINC00404-201ENST00000418660 TRIB2Q92519 343 aa19.6■□□□□ 0.73
LINC00404-201ENST00000418660 PAK6Q9NQU5 681 aaPredicted RBP19.6■□□□□ 0.73
LINC00404-201ENST00000418660 SLC15A5A6NIM6 579 aa19.59■□□□□ 0.73
LINC00404-201ENST00000418660 IRX6P78412 446 aaPredicted RBP19.59■□□□□ 0.73
LINC00404-201ENST00000418660 MAP2K5Q13163 448 aa19.59■□□□□ 0.73
LINC00404-201ENST00000418660 NMIQ13287 307 aaPredicted RBP19.59■□□□□ 0.73
LINC00404-201ENST00000418660 ALX1Q15699 326 aa19.59■□□□□ 0.73
LINC00404-201ENST00000418660 PRPF38BQ5VTL8 546 aaKnown RBP19.59■□□□□ 0.73
LINC00404-201ENST00000418660 SHCBP1Q8NEM2 672 aa19.59■□□□□ 0.73
LINC00404-201ENST00000418660 NEDD1Q8NHV4 660 aa19.59■□□□□ 0.73
LINC00404-201ENST00000418660 MKL1Q969V6 931 aa19.59■□□□□ 0.73
LINC00404-201ENST00000418660 ATG4CQ96DT6 458 aa19.59■□□□□ 0.73
LINC00404-201ENST00000418660 MOV10L1Q9BXT6 1211 aaKnown RBP19.59■□□□□ 0.73
LINC00404-201ENST00000418660 SPATC1LQ9H0A9 340 aa19.59■□□□□ 0.73
LINC00404-201ENST00000418660 MTMR4Q9NYA4 1195 aa19.59■□□□□ 0.73
LINC00404-201ENST00000418660 CLIP2Q9UDT6 1046 aa19.59■□□□□ 0.73
LINC00404-201ENST00000418660 ANAPC4Q9UJX5 808 aa19.59■□□□□ 0.73
LINC00404-201ENST00000418660 RLFQ13129 1914 aa19.59■□□□□ 0.73
LINC00404-201ENST00000418660 PLIN4Q96Q06 1357 aa19.58■□□□□ 0.73
LINC00404-201ENST00000418660 RPTORQ8N122 1335 aa19.58■□□□□ 0.73
LINC00404-201ENST00000418660 F5H6K3 240 aa19.58■□□□□ 0.72
LINC00404-201ENST00000418660 RAD21O60216 631 aa19.58■□□□□ 0.72
LINC00404-201ENST00000418660 TSPY3P0CV98 308 aa19.58■□□□□ 0.72
LINC00404-201ENST00000418660 TSPY8P0CW00 308 aa19.58■□□□□ 0.72
LINC00404-201ENST00000418660 SDSP20132 328 aa19.58■□□□□ 0.72
LINC00404-201ENST00000418660 TFAP4Q01664 338 aa19.58■□□□□ 0.72
LINC00404-201ENST00000418660 KLRC3Q07444 240 aa19.58■□□□□ 0.72
LINC00404-201ENST00000418660 TRIM32Q13049 653 aa19.58■□□□□ 0.72
LINC00404-201ENST00000418660 FAM83BQ5T0W9 1011 aa19.58■□□□□ 0.72
LINC00404-201ENST00000418660 CEP95Q96GE4 821 aa19.58■□□□□ 0.72
LINC00404-201ENST00000418660 DEFB118Q96PH6 123 aa19.58■□□□□ 0.72
LINC00404-201ENST00000418660 APBA2Q99767 749 aa19.58■□□□□ 0.72
LINC00404-201ENST00000418660 XRN2Q9H0D6 950 aaKnown RBP eCLIP19.58■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms