RNA–Protein interactions for RNA: ENST00000418132.7

CASC3-203, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 1 (best)

Gene CASC3, Length 1,986 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-203ENST00000418132 GUCY1B3Q02153 619 aa24.11■■□□□ 1.45
CASC3-203ENST00000418132 FOXD4L6Q3SYB3 417 aaPredicted RBP24.11■■□□□ 1.45
CASC3-203ENST00000418132 FOXD4L3Q6VB84 417 aaPredicted RBP24.11■■□□□ 1.45
CASC3-203ENST00000418132 TEPSINQ96N21 525 aa24.11■■□□□ 1.45
CASC3-203ENST00000418132 EPS15P42566 896 aa24.1■■□□□ 1.45
CASC3-203ENST00000418132 RRP1BQ14684 758 aaKnown RBP24.1■■□□□ 1.45
CASC3-203ENST00000418132 SHROOM1Q2M3G4 852 aaPredicted RBP24.1■■□□□ 1.45
CASC3-203ENST00000418132 OTUD7BQ6GQQ9 843 aa24.1■■□□□ 1.45
CASC3-203ENST00000418132 TRPM4Q8TD43 1214 aa24.1■■□□□ 1.45
CASC3-203ENST00000418132 GJB4Q9NTQ9 266 aa24.1■■□□□ 1.45
CASC3-203ENST00000418132 NYAP2Q9P242 653 aa24.1■■□□□ 1.45
CASC3-203ENST00000418132 TCHHQ07283 1943 aa24.1■■□□□ 1.45
CASC3-203ENST00000418132 MYH4Q9Y623 1939 aa24.1■■□□□ 1.45
CASC3-203ENST00000418132 GPR162Q16538 588 aa24.09■■□□□ 1.45
CASC3-203ENST00000418132 STAG2Q8N3U4 1231 aa24.09■■□□□ 1.45
CASC3-203ENST00000418132 MKL1Q969V6 931 aa24.09■■□□□ 1.45
CASC3-203ENST00000418132 GDF11O95390 407 aa24.09■■□□□ 1.45
CASC3-203ENST00000418132 AKAP17AQ02040 695 aaKnown RBP24.09■■□□□ 1.45
CASC3-203ENST00000418132 PKN1Q16512 942 aa24.09■■□□□ 1.45
CASC3-203ENST00000418132 SNHG28P0DPA3 235 aa24.08■■□□□ 1.45
CASC3-203ENST00000418132 JAG1P78504 1218 aa24.08■■□□□ 1.45
CASC3-203ENST00000418132 SEPT2Q15019 361 aa24.08■■□□□ 1.45
CASC3-203ENST00000418132 KRT40Q6A162 431 aa24.08■■□□□ 1.45
CASC3-203ENST00000418132 LRRC47Q8N1G4 583 aaKnown RBP24.08■■□□□ 1.45
CASC3-203ENST00000418132 LZTS2Q9BRK4 669 aa24.08■■□□□ 1.45
CASC3-203ENST00000418132 V9GY48 417 aaPredicted RBP24.08■■□□□ 1.45
CASC3-203ENST00000418132 PARP1P09874 1014 aaKnown RBP24.07■■□□□ 1.44
CASC3-203ENST00000418132 PDHBP11177 359 aa24.07■■□□□ 1.44
CASC3-203ENST00000418132 DNM1Q05193 864 aaKnown RBP24.07■■□□□ 1.44
CASC3-203ENST00000418132 CABP5Q9NP86 173 aa24.07■■□□□ 1.44
CASC3-203ENST00000418132 SCAF8Q9UPN6 1271 aaKnown RBP24.07■■□□□ 1.44
CASC3-203ENST00000418132 TRAK2O60296 914 aa24.07■■□□□ 1.44
CASC3-203ENST00000418132 GH2P01242 217 aa24.07■■□□□ 1.44
CASC3-203ENST00000418132 TRIM29Q14134 588 aa24.07■■□□□ 1.44
CASC3-203ENST00000418132 SIAH1Q8IUQ4 282 aa24.07■■□□□ 1.44
CASC3-203ENST00000418132 APOBEC3FQ8IUX4 373 aaKnown RBP24.07■■□□□ 1.44
CASC3-203ENST00000418132 DEFB129Q9H1M3 183 aa24.07■■□□□ 1.44
CASC3-203ENST00000418132 LMBRD1Q9NUN5 540 aa24.07■■□□□ 1.44
CASC3-203ENST00000418132 RBM27Q9P2N5 1060 aaKnown RBP24.07■■□□□ 1.44
CASC3-203ENST00000418132 MTMR7Q9Y216 660 aa24.07■■□□□ 1.44
CASC3-203ENST00000418132 GRIN3BO60391 1043 aa24.06■■□□□ 1.44
CASC3-203ENST00000418132 EEF2P13639 858 aaKnown RBP24.06■■□□□ 1.44
CASC3-203ENST00000418132 HIRAP54198 1017 aaPredicted RBP24.06■■□□□ 1.44
CASC3-203ENST00000418132 ICA1Q05084 483 aa24.06■■□□□ 1.44
CASC3-203ENST00000418132 ANGEL2Q5VTE6 544 aaKnown RBP24.06■■□□□ 1.44
CASC3-203ENST00000418132 FAM173BQ6P4H8 233 aa24.06■■□□□ 1.44
CASC3-203ENST00000418132 RASGRP2Q7LDG7 609 aa24.06■■□□□ 1.44
CASC3-203ENST00000418132 USP17L5A8MUK1 530 aa24.05■■□□□ 1.44
CASC3-203ENST00000418132 KLRF2D3W0D1 207 aa24.05■■□□□ 1.44
CASC3-203ENST00000418132 USP17L2Q6R6M4 530 aa24.05■■□□□ 1.44
CASC3-203ENST00000418132 MIGA2Q7L4E1 593 aa24.05■■□□□ 1.44
CASC3-203ENST00000418132 CNPY2Q9Y2B0 182 aa24.05■■□□□ 1.44
CASC3-203ENST00000418132 MYH15Q9Y2K3 1946 aa24.05■■□□□ 1.44
CASC3-203ENST00000418132 SMARCA1P28370 1054 aa24.05■■□□□ 1.44
CASC3-203ENST00000418132 LMOD1P29536 600 aaPredicted RBP24.05■■□□□ 1.44
CASC3-203ENST00000418132 SLC35G1Q2M3R5 365 aa24.05■■□□□ 1.44
CASC3-203ENST00000418132 TMEM87AQ8NBN3 555 aa24.05■■□□□ 1.44
CASC3-203ENST00000418132 SPZ1Q9BXG8 430 aa24.05■■□□□ 1.44
CASC3-203ENST00000418132 ZC3H4Q9UPT8 1303 aaKnown RBP24.05■■□□□ 1.44
CASC3-203ENST00000418132 BAZ2BQ9UIF8 2168 aaKnown RBP24.04■■□□□ 1.44
CASC3-203ENST00000418132 GOLGA8HP0CJ92 632 aa24.04■■□□□ 1.44
CASC3-203ENST00000418132 ATP2B2Q01814 1243 aa24.04■■□□□ 1.44
CASC3-203ENST00000418132 KIF23Q02241 960 aaPredicted RBP24.04■■□□□ 1.44
CASC3-203ENST00000418132 ASPRV1Q53RT3 343 aa24.04■■□□□ 1.44
CASC3-203ENST00000418132 ADARB2Q9NS39 739 aaKnown RBP24.04■■□□□ 1.44
CASC3-203ENST00000418132 hCG_1642624A0A1W2PR95 340 aa24.03■■□□□ 1.44
CASC3-203ENST00000418132 CYTH3O43739 400 aa24.03■■□□□ 1.44
CASC3-203ENST00000418132 PRPF40AO75400 957 aaKnown RBP24.03■■□□□ 1.44
CASC3-203ENST00000418132 KRT85P78386 507 aa24.03■■□□□ 1.44
CASC3-203ENST00000418132 CAP2P40123 477 aa24.03■■□□□ 1.44
CASC3-203ENST00000418132 PFKFB3Q16875 520 aaPredicted RBP24.03■■□□□ 1.44
CASC3-203ENST00000418132 DPY19L2Q6NUT2 758 aa24.03■■□□□ 1.44
CASC3-203ENST00000418132 GGA3Q9NZ52 723 aa24.03■■□□□ 1.44
CASC3-203ENST00000418132 ZBTB21Q9ULJ3 1066 aa24.03■■□□□ 1.44
CASC3-203ENST00000418132 SYNPO2Q9UMS6 1093 aa24.03■■□□□ 1.44
CASC3-203ENST00000418132 MMP1P03956 469 aa24.02■■□□□ 1.44
CASC3-203ENST00000418132 XBP1P17861 261 aa24.02■■□□□ 1.44
CASC3-203ENST00000418132 NCLP19338 710 aaKnown RBP24.02■■□□□ 1.44
CASC3-203ENST00000418132 BRAPQ7Z569 592 aa24.02■■□□□ 1.44
CASC3-203ENST00000418132 L3MBTL3Q96JM7 780 aaPredicted RBP24.02■■□□□ 1.44
CASC3-203ENST00000418132 GDPD2Q9HCC8 539 aa24.02■■□□□ 1.44
CASC3-203ENST00000418132 PHF20L1A8MW92 1017 aa24.02■■□□□ 1.43
CASC3-203ENST00000418132 SCG2P13521 617 aa24.02■■□□□ 1.43
CASC3-203ENST00000418132 ZNF543Q08ER8 600 aa24.02■■□□□ 1.43
CASC3-203ENST00000418132 SHISA4Q96DD7 197 aa24.02■■□□□ 1.43
CASC3-203ENST00000418132 PITPNM2Q9BZ72 1349 aa24.01■■□□□ 1.43
CASC3-203ENST00000418132 KIF28PB7ZC32 967 aa24.01■■□□□ 1.43
CASC3-203ENST00000418132 U2AF2P26368 475 aaKnown RBP eCLIP24.01■■□□□ 1.436e-7■□□□□ 9.6
CASC3-203ENST00000418132 USP48Q86UV5 1035 aa24.01■■□□□ 1.43
CASC3-203ENST00000418132 PPP2R3BQ9Y5P8 575 aa24.01■■□□□ 1.43
CASC3-203ENST00000418132 SKOR2Q2VWA4 1001 aaPredicted RBP24■■□□□ 1.43
CASC3-203ENST00000418132 GPATCH4Q5T3I0 446 aaKnown RBP24■■□□□ 1.43
CASC3-203ENST00000418132 NBPF12Q5TAG4 269 aaPredicted RBP24■■□□□ 1.43
CASC3-203ENST00000418132 ATL3Q6DD88 541 aa24■■□□□ 1.43
CASC3-203ENST00000418132 GMCL1P1Q8NEA9 526 aa24■■□□□ 1.43
CASC3-203ENST00000418132 KCNJ14Q9UNX9 436 aa24■■□□□ 1.43
CASC3-203ENST00000418132 FIBPO43427 364 aa24■■□□□ 1.43
CASC3-203ENST00000418132 CSPP1Q1MSJ5 1256 aa24■■□□□ 1.43
CASC3-203ENST00000418132 PHF20Q9BVI0 1012 aa24■■□□□ 1.43
CASC3-203ENST00000418132 RIOX1Q9H6W3 641 aa24■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms