RNA–Protein interactions for RNA: ENST00000418107.2

HLA-DMB-258, Transcript of major histocompatibility complex, class II, DM beta, humanhuman

APPRIS P1 BASIC

Gene HLA-DMB, Length 1,397 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMB-258ENST00000418107 USP5P45974 858 aa15.48■□□□□ 0.07
HLA-DMB-258ENST00000418107 CTDSPL2Q05D32 466 aa15.48■□□□□ 0.07
HLA-DMB-258ENST00000418107 PICALMQ13492 652 aa15.48■□□□□ 0.07
HLA-DMB-258ENST00000418107 CCDC84Q86UT8 332 aaPredicted RBP15.48■□□□□ 0.07
HLA-DMB-258ENST00000418107 CERS3Q8IU89 383 aa15.48■□□□□ 0.07
HLA-DMB-258ENST00000418107 SMCR8Q8TEV9 937 aaPredicted RBP15.48■□□□□ 0.07
HLA-DMB-258ENST00000418107 DDX4Q9NQI0 724 aaKnown RBP15.48■□□□□ 0.07
HLA-DMB-258ENST00000418107 SH2B1Q9NRF2 756 aaPredicted RBP15.48■□□□□ 0.07
HLA-DMB-258ENST00000418107 TOMM22Q9NS69 142 aa15.48■□□□□ 0.07
HLA-DMB-258ENST00000418107 TAOK2Q9UL54 1235 aa15.48■□□□□ 0.07
HLA-DMB-258ENST00000418107 SLC45A1Q9Y2W3 748 aa15.48■□□□□ 0.07
HLA-DMB-258ENST00000418107 PLCG2P16885 1265 aa15.47■□□□□ 0.07
HLA-DMB-258ENST00000418107 MCM5P33992 734 aa15.47■□□□□ 0.07
HLA-DMB-258ENST00000418107 MAP3K10Q02779 954 aa15.47■□□□□ 0.07
HLA-DMB-258ENST00000418107 GIMAP6Q6P9H5 292 aa15.47■□□□□ 0.07
HLA-DMB-258ENST00000418107 MFSD6Q6ZSS7 791 aa15.47■□□□□ 0.07
HLA-DMB-258ENST00000418107 AMOTL1Q8IY63 956 aa15.47■□□□□ 0.07
HLA-DMB-258ENST00000418107 DEFB118Q96PH6 123 aa15.47■□□□□ 0.07
HLA-DMB-258ENST00000418107 LRRC2Q9BYS8 371 aa15.47■□□□□ 0.07
HLA-DMB-258ENST00000418107 CWC22Q9HCG8 908 aaKnown RBP15.47■□□□□ 0.07
HLA-DMB-258ENST00000418107 NAP1L2Q9ULW6 460 aaPredicted RBP15.47■□□□□ 0.07
HLA-DMB-258ENST00000418107 CDK5RAP2Q96SN8 1893 aa15.46■□□□□ 0.07
HLA-DMB-258ENST00000418107 EVI5O60447 810 aa15.46■□□□□ 0.07
HLA-DMB-258ENST00000418107 CTNND1O60716 968 aaKnown RBP15.46■□□□□ 0.07
HLA-DMB-258ENST00000418107 TFRCP02786 760 aaKnown RBP15.46■□□□□ 0.07
HLA-DMB-258ENST00000418107 BTDP43251 543 aa15.46■□□□□ 0.07
HLA-DMB-258ENST00000418107 PPARAQ07869 468 aa15.46■□□□□ 0.07
HLA-DMB-258ENST00000418107 IRF5Q13568 498 aa15.46■□□□□ 0.07
HLA-DMB-258ENST00000418107 RRP12Q5JTH9 1297 aaKnown RBP15.46■□□□□ 0.07
HLA-DMB-258ENST00000418107 CHST3Q7LGC8 479 aa15.46■□□□□ 0.07
HLA-DMB-258ENST00000418107 TBC1D10CQ8IV04 446 aa15.46■□□□□ 0.07
HLA-DMB-258ENST00000418107 STK11IPQ8N1F8 1099 aa15.46■□□□□ 0.07
HLA-DMB-258ENST00000418107 ANKRD13CQ8N6S4 541 aa15.46■□□□□ 0.07
HLA-DMB-258ENST00000418107 PXYLP1Q8TE99 480 aa15.46■□□□□ 0.07
HLA-DMB-258ENST00000418107 RNF41Q9H4P4 317 aaPredicted RBP15.46■□□□□ 0.07
HLA-DMB-258ENST00000418107 CNNM2Q9H8M5 875 aa15.46■□□□□ 0.07
HLA-DMB-258ENST00000418107 ATP8A2Q9NTI2 1148 aa15.46■□□□□ 0.07
HLA-DMB-258ENST00000418107 CIZ1Q9ULV3 898 aaPredicted RBP15.46■□□□□ 0.07
HLA-DMB-258ENST00000418107 DOCK1Q14185 1865 aa15.45■□□□□ 0.06
HLA-DMB-258ENST00000418107 PRC1O43663 620 aa15.45■□□□□ 0.06
HLA-DMB-258ENST00000418107 SLC3A2P08195 630 aaKnown RBP15.45■□□□□ 0.06
HLA-DMB-258ENST00000418107 PPP4CP60510 307 aa15.45■□□□□ 0.06
HLA-DMB-258ENST00000418107 EXOSC10Q01780 885 aaKnown RBP15.45■□□□□ 0.06
HLA-DMB-258ENST00000418107 CUL4AQ13619 759 aa15.45■□□□□ 0.06
HLA-DMB-258ENST00000418107 TOB2Q14106 344 aaPredicted RBP15.45■□□□□ 0.06
HLA-DMB-258ENST00000418107 AKNAD1Q5T1N1 836 aa15.45■□□□□ 0.06
HLA-DMB-258ENST00000418107 TREML2Q5T2D2 321 aa15.45■□□□□ 0.06
HLA-DMB-258ENST00000418107 TEX11Q8IYF3 940 aa15.45■□□□□ 0.06
HLA-DMB-258ENST00000418107 SH3RF3Q8TEJ3 882 aaPredicted RBP15.45■□□□□ 0.06
HLA-DMB-258ENST00000418107 INTS4Q96HW7 963 aaKnown RBP15.45■□□□□ 0.06
HLA-DMB-258ENST00000418107 KRT23Q9C075 422 aa15.45■□□□□ 0.06
HLA-DMB-258ENST00000418107 AGTPBP1Q9UPW5 1226 aa15.45■□□□□ 0.06
HLA-DMB-258ENST00000418107 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.45■□□□□ 0.06
HLA-DMB-258ENST00000418107 PTPRFP10586 1907 aa15.45■□□□□ 0.06
HLA-DMB-258ENST00000418107 FAM196BA6NMK8 535 aa15.44■□□□□ 0.06
HLA-DMB-258ENST00000418107 STK3Q13188 491 aa15.44■□□□□ 0.06
HLA-DMB-258ENST00000418107 COL9A3Q14050 684 aaPredicted RBP15.44■□□□□ 0.06
HLA-DMB-258ENST00000418107 CCDC83Q8IWF9 413 aa15.44■□□□□ 0.06
HLA-DMB-258ENST00000418107 MB21D2Q8IYB1 491 aaPredicted RBP15.44■□□□□ 0.06
HLA-DMB-258ENST00000418107 BRF1Q92994 677 aa15.44■□□□□ 0.06
HLA-DMB-258ENST00000418107 COA7Q96BR5 231 aa15.44■□□□□ 0.06
HLA-DMB-258ENST00000418107 FAM163AQ96GL9 167 aaPredicted RBP15.44■□□□□ 0.06
HLA-DMB-258ENST00000418107 NBPF3Q9H094 633 aa15.44■□□□□ 0.06
HLA-DMB-258ENST00000418107 PAK6Q9NQU5 681 aaPredicted RBP15.44■□□□□ 0.06
HLA-DMB-258ENST00000418107 MCM9Q9NXL9 1143 aa15.44■□□□□ 0.06
HLA-DMB-258ENST00000418107 TPCN1Q9ULQ1 816 aa15.44■□□□□ 0.06
HLA-DMB-258ENST00000418107 PHIPQ8WWQ0 1821 aa15.44■□□□□ 0.06
HLA-DMB-258ENST00000418107 GPR75-ASB3A0A0A6YYF3 556 aa15.43■□□□□ 0.06
HLA-DMB-258ENST00000418107 B4E1Z4 1266 aa15.43■□□□□ 0.06
HLA-DMB-258ENST00000418107 USP17L12C9JPN9 530 aa15.43■□□□□ 0.06
HLA-DMB-258ENST00000418107 USP17L21D6R901 530 aa15.43■□□□□ 0.06
HLA-DMB-258ENST00000418107 SOX1O00570 391 aaPredicted RBP15.43■□□□□ 0.06
HLA-DMB-258ENST00000418107 ME3Q16798 604 aa15.43■□□□□ 0.06
HLA-DMB-258ENST00000418107 TGFBRAP1Q8WUH2 860 aa15.43■□□□□ 0.06
HLA-DMB-258ENST00000418107 PAWRQ96IZ0 340 aaKnown RBP15.43■□□□□ 0.06
HLA-DMB-258ENST00000418107 CRISPLD2Q9H0B8 497 aa15.43■□□□□ 0.06
HLA-DMB-258ENST00000418107 DCP1AQ9NPI6 582 aaPredicted RBP15.43■□□□□ 0.06
HLA-DMB-258ENST00000418107 SMC3Q9UQE7 1217 aa15.43■□□□□ 0.06
HLA-DMB-258ENST00000418107 NAV1Q8NEY1 1877 aa15.43■□□□□ 0.06
HLA-DMB-258ENST00000418107 MYH1P12882 1939 aa15.43■□□□□ 0.06
HLA-DMB-258ENST00000418107 FOCADQ5VW36 1801 aa15.42■□□□□ 0.06
HLA-DMB-258ENST00000418107 CYP2D7A0A087X1C5 515 aa15.42■□□□□ 0.06
HLA-DMB-258ENST00000418107 LARGE1O95461 756 aa15.42■□□□□ 0.06
HLA-DMB-258ENST00000418107 POLR3DP05423 398 aaPredicted RBP15.42■□□□□ 0.06
HLA-DMB-258ENST00000418107 RHBDL3P58872 404 aa15.42■□□□□ 0.06
HLA-DMB-258ENST00000418107 APOBRQ0VD83 1088 aa15.42■□□□□ 0.06
HLA-DMB-258ENST00000418107 FAM110CQ1W6H9 321 aa15.42■□□□□ 0.06
HLA-DMB-258ENST00000418107 CTR9Q6PD62 1173 aa15.42■□□□□ 0.06
HLA-DMB-258ENST00000418107 NECAB1Q8N987 351 aa15.42■□□□□ 0.06
HLA-DMB-258ENST00000418107 DIS3LQ8TF46 1054 aaKnown RBP15.42■□□□□ 0.06
HLA-DMB-258ENST00000418107 STAG1Q8WVM7 1258 aa15.42■□□□□ 0.06
HLA-DMB-258ENST00000418107 ARPP21Q9UBL0 812 aaPredicted RBP15.42■□□□□ 0.06
HLA-DMB-258ENST00000418107 PNMA3Q9UL41 463 aa15.42■□□□□ 0.06
HLA-DMB-258ENST00000418107 A0A1W2PPC1 479 aa15.41■□□□□ 0.06
HLA-DMB-258ENST00000418107 TBC1D12O60347 775 aa15.41■□□□□ 0.06
HLA-DMB-258ENST00000418107 KDM4AO75164 1064 aa15.41■□□□□ 0.06
HLA-DMB-258ENST00000418107 NUCB2P80303 420 aa15.41■□□□□ 0.06
HLA-DMB-258ENST00000418107 SPP2Q13103 211 aa15.41■□□□□ 0.06
HLA-DMB-258ENST00000418107 MAPKAPK5Q8IW41 473 aa15.41■□□□□ 0.06
HLA-DMB-258ENST00000418107 LRCH3Q96II8 777 aa15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms