RNA–Protein interactions for RNA: ENST00000415920.5

CPNE1-209, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 731 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-209ENST00000415920 SBK1Q52WX2 424 aa16.13■□□□□ 0.17
CPNE1-209ENST00000415920 C12orf60Q5U649 245 aa16.13■□□□□ 0.17
CPNE1-209ENST00000415920 TBC1D10CQ8IV04 446 aa16.13■□□□□ 0.17
CPNE1-209ENST00000415920 PXYLP1Q8TE99 480 aa16.13■□□□□ 0.17
CPNE1-209ENST00000415920 DIS3LQ8TF46 1054 aaKnown RBP16.13■□□□□ 0.17
CPNE1-209ENST00000415920 SERPINB13Q9UIV8 391 aa16.13■□□□□ 0.17
CPNE1-209ENST00000415920 SLC3A2P08195 630 aaKnown RBP16.12■□□□□ 0.17
CPNE1-209ENST00000415920 TRIM32Q13049 653 aa16.12■□□□□ 0.17
CPNE1-209ENST00000415920 RNF20Q5VTR2 975 aa16.12■□□□□ 0.17
CPNE1-209ENST00000415920 CREB3L3Q68CJ9 461 aa16.12■□□□□ 0.17
CPNE1-209ENST00000415920 SLC44A5Q8NCS7 719 aa16.12■□□□□ 0.17
CPNE1-209ENST00000415920 DYNLL2Q96FJ2 89 aa16.12■□□□□ 0.17
CPNE1-209ENST00000415920 HTATIP2Q9BUP3 242 aa16.12■□□□□ 0.17
CPNE1-209ENST00000415920 BACH2Q9BYV9 841 aa16.12■□□□□ 0.17
CPNE1-209ENST00000415920 EHD4Q9H223 541 aa16.12■□□□□ 0.17
CPNE1-209ENST00000415920 PAK6Q9NQU5 681 aaPredicted RBP16.12■□□□□ 0.17
CPNE1-209ENST00000415920 TOMM22Q9NS69 142 aa16.12■□□□□ 0.17
CPNE1-209ENST00000415920 PI4KBQ9UBF8 816 aa16.12■□□□□ 0.17
CPNE1-209ENST00000415920 SOX1O00570 391 aaPredicted RBP16.11■□□□□ 0.17
CPNE1-209ENST00000415920 SLC27A2O14975 620 aa16.11■□□□□ 0.17
CPNE1-209ENST00000415920 TFRCP02786 760 aaKnown RBP16.11■□□□□ 0.17
CPNE1-209ENST00000415920 CYP21A2P08686 494 aa16.11■□□□□ 0.17
CPNE1-209ENST00000415920 FAM110CQ1W6H9 321 aa16.11■□□□□ 0.17
CPNE1-209ENST00000415920 ZNF280CQ8ND82 737 aa16.11■□□□□ 0.17
CPNE1-209ENST00000415920 NBPF3Q9H094 633 aa16.11■□□□□ 0.17
CPNE1-209ENST00000415920 CRISPLD2Q9H0B8 497 aa16.11■□□□□ 0.17
CPNE1-209ENST00000415920 DNAJC18Q9H819 358 aa16.11■□□□□ 0.17
CPNE1-209ENST00000415920 NEDD4P46934 1319 aa16.11■□□□□ 0.17
CPNE1-209ENST00000415920 PRDM1O75626 825 aa16.1■□□□□ 0.17
CPNE1-209ENST00000415920 HSPA4P34932 840 aa16.1■□□□□ 0.17
CPNE1-209ENST00000415920 CAP2P40123 477 aa16.1■□□□□ 0.17
CPNE1-209ENST00000415920 RRP12Q5JTH9 1297 aaKnown RBP16.1■□□□□ 0.17
CPNE1-209ENST00000415920 C16orf86Q6ZW13 317 aa16.1■□□□□ 0.17
CPNE1-209ENST00000415920 PROCA1Q8NCQ7 364 aaPredicted RBP16.1■□□□□ 0.17
CPNE1-209ENST00000415920 PAWRQ96IZ0 340 aaKnown RBP16.1■□□□□ 0.17
CPNE1-209ENST00000415920 USP26Q9BXU7 913 aa16.1■□□□□ 0.17
CPNE1-209ENST00000415920 ASCC2Q9H1I8 757 aaPredicted RBP16.1■□□□□ 0.17
CPNE1-209ENST00000415920 HERC5Q9UII4 1024 aaKnown RBP16.1■□□□□ 0.17
CPNE1-209ENST00000415920 ANAPC4Q9UJX5 808 aa16.1■□□□□ 0.17
CPNE1-209ENST00000415920 TAF6LQ9Y6J9 622 aa16.1■□□□□ 0.17
CPNE1-209ENST00000415920 EPB41L2O43491 1005 aaKnown RBP16.09■□□□□ 0.17
CPNE1-209ENST00000415920 ZKSCAN1P17029 563 aaPredicted RBP16.09■□□□□ 0.17
CPNE1-209ENST00000415920 PDE4BQ07343 736 aa16.09■□□□□ 0.17
CPNE1-209ENST00000415920 STAG1Q8WVM7 1258 aa16.09■□□□□ 0.17
CPNE1-209ENST00000415920 COA7Q96BR5 231 aa16.09■□□□□ 0.17
CPNE1-209ENST00000415920 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.09■□□□□ 0.17
CPNE1-209ENST00000415920 RNF41Q9H4P4 317 aaPredicted RBP16.09■□□□□ 0.17
CPNE1-209ENST00000415920 MKNK2Q9HBH9 465 aa16.09■□□□□ 0.17
CPNE1-209ENST00000415920 SWAP70Q9UH65 585 aa16.09■□□□□ 0.17
CPNE1-209ENST00000415920 GJD2Q9UKL4 321 aa16.09■□□□□ 0.17
CPNE1-209ENST00000415920 NR2E3Q9Y5X4 410 aa16.09■□□□□ 0.17
CPNE1-209ENST00000415920 EVI5O60447 810 aa16.08■□□□□ 0.16
CPNE1-209ENST00000415920 GDF11O95390 407 aa16.08■□□□□ 0.16
CPNE1-209ENST00000415920 MNX1P50219 401 aaPredicted RBP16.08■□□□□ 0.16
CPNE1-209ENST00000415920 GABPAQ06546 454 aa16.08■□□□□ 0.16
CPNE1-209ENST00000415920 NECTIN1Q15223 517 aa16.08■□□□□ 0.16
CPNE1-209ENST00000415920 AKNAD1Q5T1N1 836 aa16.08■□□□□ 0.16
CPNE1-209ENST00000415920 MFSD6Q6ZSS7 791 aa16.08■□□□□ 0.16
CPNE1-209ENST00000415920 ZNF287Q9HBT7 754 aa16.08■□□□□ 0.16
CPNE1-209ENST00000415920 PNMA3Q9UL41 463 aa16.08■□□□□ 0.16
CPNE1-209ENST00000415920 USP17L5A8MUK1 530 aa16.07■□□□□ 0.16
CPNE1-209ENST00000415920 SHMT1P34896 483 aa16.07■□□□□ 0.16
CPNE1-209ENST00000415920 CDK8P49336 464 aa16.07■□□□□ 0.16
CPNE1-209ENST00000415920 TRDNQ13061 729 aa16.07■□□□□ 0.16
CPNE1-209ENST00000415920 MTMR2Q13614 643 aa16.07■□□□□ 0.16
CPNE1-209ENST00000415920 SH3D19Q5HYK7 790 aa16.07■□□□□ 0.16
CPNE1-209ENST00000415920 STOX1Q6ZVD7 989 aa16.07■□□□□ 0.16
CPNE1-209ENST00000415920 RALYLQ86SE5 291 aaKnown RBP16.07■□□□□ 0.16
CPNE1-209ENST00000415920 FOXP4Q8IVH2 680 aaPredicted RBP16.07■□□□□ 0.16
CPNE1-209ENST00000415920 LRCH3Q96II8 777 aa16.07■□□□□ 0.16
CPNE1-209ENST00000415920 TXNRD2Q9NNW7 524 aa16.07■□□□□ 0.16
CPNE1-209ENST00000415920 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.07■□□□□ 0.16
CPNE1-209ENST00000415920 E7EWF7 191 aa16.06■□□□□ 0.16
CPNE1-209ENST00000415920 MPHOSPH10O00566 681 aaKnown RBP16.06■□□□□ 0.16
CPNE1-209ENST00000415920 POTEEQ6S8J3 1075 aa16.06■□□□□ 0.16
CPNE1-209ENST00000415920 TRIB2Q92519 343 aa16.06■□□□□ 0.16
CPNE1-209ENST00000415920 C22orf23Q9BZE7 217 aa16.06■□□□□ 0.16
CPNE1-209ENST00000415920 CNNM2Q9H8M5 875 aa16.06■□□□□ 0.16
CPNE1-209ENST00000415920 INCENPQ9NQS7 918 aa16.06■□□□□ 0.16
CPNE1-209ENST00000415920 SNX14Q9Y5W7 946 aa16.06■□□□□ 0.16
CPNE1-209ENST00000415920 TACC3Q9Y6A5 838 aa16.06■□□□□ 0.16
CPNE1-209ENST00000415920 PLIN4Q96Q06 1357 aa16.05■□□□□ 0.16
CPNE1-209ENST00000415920 TSPY2A6NKD2 308 aa16.05■□□□□ 0.16
CPNE1-209ENST00000415920 B4E1Z4 1266 aa16.05■□□□□ 0.16
CPNE1-209ENST00000415920 ORC4O43929 436 aa16.05■□□□□ 0.16
CPNE1-209ENST00000415920 RANBP6O60518 1105 aaKnown RBP16.05■□□□□ 0.16
CPNE1-209ENST00000415920 HMGCRP04035 888 aa16.05■□□□□ 0.16
CPNE1-209ENST00000415920 PCP11498 1178 aaKnown RBP16.05■□□□□ 0.16
CPNE1-209ENST00000415920 RASA1P20936 1047 aa16.05■□□□□ 0.16
CPNE1-209ENST00000415920 GCLCP48506 637 aaPredicted RBP16.05■□□□□ 0.16
CPNE1-209ENST00000415920 KRT32Q14532 448 aa16.05■□□□□ 0.16
CPNE1-209ENST00000415920 METTL16Q86W50 562 aaKnown RBP16.05■□□□□ 0.16
CPNE1-209ENST00000415920 RASEFQ8IZ41 740 aa16.05■□□□□ 0.16
CPNE1-209ENST00000415920 NCOA7Q8NI08 942 aa16.05■□□□□ 0.16
CPNE1-209ENST00000415920 JAKMIP1Q96N16 626 aaKnown RBP16.05■□□□□ 0.16
CPNE1-209ENST00000415920 P2RX7Q99572 595 aaKnown RBP16.05■□□□□ 0.16
CPNE1-209ENST00000415920 ZMYND8Q9ULU4 1186 aaPredicted RBP16.05■□□□□ 0.16
CPNE1-209ENST00000415920 TSPY3P0CV98 308 aa16.04■□□□□ 0.16
CPNE1-209ENST00000415920 TSPY8P0CW00 308 aa16.04■□□□□ 0.16
CPNE1-209ENST00000415920 AKR1B1P15121 316 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms