RNA–Protein interactions for RNA: ENST00000414562.1

LINC00330-201, long intergenic non-protein coding RNA 330, humanhuman

TSL 2 BASIC

Gene LINC00330, Length 2,036 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00330-201ENST00000414562 FIBPO43427 364 aa13.12□□□□□ -0.31
LINC00330-201ENST00000414562 GDF11O95390 407 aa13.12□□□□□ -0.31
LINC00330-201ENST00000414562 TFAP4Q01664 338 aa13.12□□□□□ -0.31
LINC00330-201ENST00000414562 PRKG1Q13976 671 aa13.12□□□□□ -0.31
LINC00330-201ENST00000414562 PNMA8AQ86V59 439 aaPredicted RBP13.12□□□□□ -0.31
LINC00330-201ENST00000414562 DCPSQ96C86 337 aaKnown RBP13.12□□□□□ -0.31
LINC00330-201ENST00000414562 MKNK2Q9HBH9 465 aa13.12□□□□□ -0.31
LINC00330-201ENST00000414562 CLEC11AQ9Y240 323 aa13.12□□□□□ -0.31
LINC00330-201ENST00000414562 PAPPA2Q9BXP8 1791 aa13.11□□□□□ -0.31
LINC00330-201ENST00000414562 TSPY2A6NKD2 308 aa13.11□□□□□ -0.31
LINC00330-201ENST00000414562 MBD3O95983 291 aa13.11□□□□□ -0.31
LINC00330-201ENST00000414562 HLA-DOAP06340 250 aa13.11□□□□□ -0.31
LINC00330-201ENST00000414562 TNNI2P48788 182 aa13.11□□□□□ -0.31
LINC00330-201ENST00000414562 KRT85P78386 507 aa13.11□□□□□ -0.31
LINC00330-201ENST00000414562 TNFAIP1Q13829 316 aa13.11□□□□□ -0.31
LINC00330-201ENST00000414562 SEC23AQ15436 765 aa13.11□□□□□ -0.31
LINC00330-201ENST00000414562 RTN1Q16799 776 aa13.11□□□□□ -0.31
LINC00330-201ENST00000414562 IFIT1BQ5T764 474 aaKnown RBP13.11□□□□□ -0.31
LINC00330-201ENST00000414562 ZNF654Q8IZM8 581 aa13.11□□□□□ -0.31
LINC00330-201ENST00000414562 NUP133Q8WUM0 1156 aa13.11□□□□□ -0.31
LINC00330-201ENST00000414562 CDCA5Q96FF9 252 aa13.11□□□□□ -0.31
LINC00330-201ENST00000414562 C8orf76Q96K31 380 aa13.11□□□□□ -0.31
LINC00330-201ENST00000414562 ZSCAN16Q9H4T2 348 aaPredicted RBP13.11□□□□□ -0.31
LINC00330-201ENST00000414562 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.11□□□□□ -0.31
LINC00330-201ENST00000414562 IGKV6D-41A0A0C4DH26 115 aa13.1□□□□□ -0.31
LINC00330-201ENST00000414562 CCDC196A0A1B0GTZ2 297 aa13.1□□□□□ -0.31
LINC00330-201ENST00000414562 TBC1D12O60347 775 aa13.1□□□□□ -0.31
LINC00330-201ENST00000414562 USP2O75604 605 aaPredicted RBP13.1□□□□□ -0.31
LINC00330-201ENST00000414562 FDPSP14324 419 aaKnown RBP13.1□□□□□ -0.31
LINC00330-201ENST00000414562 CDC27P30260 824 aa13.1□□□□□ -0.31
LINC00330-201ENST00000414562 INPP5BP32019 993 aa13.1□□□□□ -0.31
LINC00330-201ENST00000414562 GUCY1B3Q02153 619 aa13.1□□□□□ -0.31
LINC00330-201ENST00000414562 RASGRP2Q7LDG7 609 aa13.1□□□□□ -0.31
LINC00330-201ENST00000414562 CATIPQ7Z7H3 387 aa13.1□□□□□ -0.31
LINC00330-201ENST00000414562 ENAHQ8N8S7 591 aaPredicted RBP13.1□□□□□ -0.31
LINC00330-201ENST00000414562 OTOFQ9HC10 1997 aa13.1□□□□□ -0.31
LINC00330-201ENST00000414562 ITGBL1O95965 494 aaPredicted RBP13.1□□□□□ -0.31
LINC00330-201ENST00000414562 SSRP1Q08945 709 aaKnown RBP13.1□□□□□ -0.31
LINC00330-201ENST00000414562 SULF1Q8IWU6 871 aa13.1□□□□□ -0.31
LINC00330-201ENST00000414562 CRACR2BQ8N4Y2 399 aaPredicted RBP13.1□□□□□ -0.31
LINC00330-201ENST00000414562 ZNF287Q9HBT7 754 aa13.1□□□□□ -0.31
LINC00330-201ENST00000414562 ATAD5Q96QE3 1844 aa13.1□□□□□ -0.31
LINC00330-201ENST00000414562 RCAN1P53805 252 aa13.09□□□□□ -0.31
LINC00330-201ENST00000414562 RESTQ13127 1097 aa13.09□□□□□ -0.31
LINC00330-201ENST00000414562 CAVIN1Q6NZI2 390 aaKnown RBP13.09□□□□□ -0.31
LINC00330-201ENST00000414562 FAM173BQ6P4H8 233 aa13.09□□□□□ -0.31
LINC00330-201ENST00000414562 TMEM87AQ8NBN3 555 aa13.09□□□□□ -0.31
LINC00330-201ENST00000414562 NEDD1Q8NHV4 660 aa13.09□□□□□ -0.31
LINC00330-201ENST00000414562 GPT2Q8TD30 523 aa13.09□□□□□ -0.31
LINC00330-201ENST00000414562 PHKBQ93100 1093 aa13.09□□□□□ -0.31
LINC00330-201ENST00000414562 NT5C2P49902 561 aa13.08□□□□□ -0.31
LINC00330-201ENST00000414562 SEPT2Q15019 361 aa13.08□□□□□ -0.31
LINC00330-201ENST00000414562 CERKLQ49MI3 558 aaPredicted RBP13.08□□□□□ -0.31
LINC00330-201ENST00000414562 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.08□□□□□ -0.31
LINC00330-201ENST00000414562 LDHDQ86WU2 507 aa13.08□□□□□ -0.31
LINC00330-201ENST00000414562 ZNF444Q8N0Y2 327 aaPredicted RBP13.08□□□□□ -0.31
LINC00330-201ENST00000414562 FANCBQ8NB91 859 aa13.08□□□□□ -0.31
LINC00330-201ENST00000414562 ZKSCAN4Q969J2 545 aaPredicted RBP13.08□□□□□ -0.31
LINC00330-201ENST00000414562 CEP95Q96GE4 821 aa13.08□□□□□ -0.31
LINC00330-201ENST00000414562 SLC26A6Q9BXS9 759 aa13.08□□□□□ -0.31
LINC00330-201ENST00000414562 SWAP70Q9UH65 585 aa13.08□□□□□ -0.31
LINC00330-201ENST00000414562 HERC5Q9UII4 1024 aaKnown RBP13.08□□□□□ -0.31
LINC00330-201ENST00000414562 ZNF112Q9UJU3 913 aa13.08□□□□□ -0.31
LINC00330-201ENST00000414562 GADD45BO75293 160 aaPredicted RBP13.08□□□□□ -0.32
LINC00330-201ENST00000414562 GH2P01242 217 aa13.08□□□□□ -0.32
LINC00330-201ENST00000414562 NOVP48745 357 aa13.08□□□□□ -0.32
LINC00330-201ENST00000414562 TRIM22Q8IYM9 498 aa13.08□□□□□ -0.32
LINC00330-201ENST00000414562 ALG1Q9BT22 464 aa13.08□□□□□ -0.32
LINC00330-201ENST00000414562 FAM217BQ9NTX9 383 aaPredicted RBP13.08□□□□□ -0.32
LINC00330-201ENST00000414562 TFIP11Q9UBB9 837 aaKnown RBP13.08□□□□□ -0.32
LINC00330-201ENST00000414562 MYH6P13533 1939 aa13.07□□□□□ -0.32
LINC00330-201ENST00000414562 PHIPQ8WWQ0 1821 aa13.07□□□□□ -0.32
LINC00330-201ENST00000414562 A0A1W2PRG0 241 aa13.07□□□□□ -0.32
LINC00330-201ENST00000414562 TSPY3P0CV98 308 aa13.07□□□□□ -0.32
LINC00330-201ENST00000414562 TSPY8P0CW00 308 aa13.07□□□□□ -0.32
LINC00330-201ENST00000414562 CALM1P0DP23 149 aa13.07□□□□□ -0.32
LINC00330-201ENST00000414562 CALM2P0DP24 149 aa13.07□□□□□ -0.32
LINC00330-201ENST00000414562 CALM3P0DP25 149 aa13.07□□□□□ -0.32
LINC00330-201ENST00000414562 CHRM1P11229 460 aaPredicted RBP13.07□□□□□ -0.32
LINC00330-201ENST00000414562 CAP2P40123 477 aa13.07□□□□□ -0.32
LINC00330-201ENST00000414562 TRIM29Q14134 588 aa13.07□□□□□ -0.32
LINC00330-201ENST00000414562 PPP2R5BQ15173 497 aa13.07□□□□□ -0.32
LINC00330-201ENST00000414562 CCDC178Q5BJE1 867 aa13.07□□□□□ -0.32
LINC00330-201ENST00000414562 CST9Q5W186 159 aa13.07□□□□□ -0.32
LINC00330-201ENST00000414562 OTUD7BQ6GQQ9 843 aa13.07□□□□□ -0.32
LINC00330-201ENST00000414562 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.07□□□□□ -0.32
LINC00330-201ENST00000414562 WASF1Q92558 559 aa13.07□□□□□ -0.32
LINC00330-201ENST00000414562 KLRG1Q96E93 195 aa13.07□□□□□ -0.32
LINC00330-201ENST00000414562 SCAND2PQ9GZW5 306 aaPredicted RBP13.07□□□□□ -0.32
LINC00330-201ENST00000414562 GPBP1L1Q9HC44 474 aaPredicted RBP13.07□□□□□ -0.32
LINC00330-201ENST00000414562 PPP2R3BQ9Y5P8 575 aa13.07□□□□□ -0.32
LINC00330-201ENST00000414562 MYH15Q9Y2K3 1946 aa13.07□□□□□ -0.32
LINC00330-201ENST00000414562 NID2Q14112 1375 aa13.07□□□□□ -0.32
LINC00330-201ENST00000414562 PLIN4Q96Q06 1357 aa13.07□□□□□ -0.32
LINC00330-201ENST00000414562 MYH4Q9Y623 1939 aa13.07□□□□□ -0.32
LINC00330-201ENST00000414562 IFNAR1P17181 557 aa13.06□□□□□ -0.32
LINC00330-201ENST00000414562 UBE2HP62256 183 aa13.06□□□□□ -0.32
LINC00330-201ENST00000414562 NTRK3Q16288 839 aa13.06□□□□□ -0.32
LINC00330-201ENST00000414562 KIAA1755Q5JYT7 1200 aa13.06□□□□□ -0.32
LINC00330-201ENST00000414562 TEX2Q8IWB9 1127 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms