RNA–Protein interactions for RNA: ENST00000412866.2

VSIG4-202, Transcript of V-set and immunoglobulin domain containing 4, humanhuman

TSL 2 BASIC

Gene VSIG4, Length 1,474 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSIG4-202ENST00000412866 SAFBQ15424 915 aaKnown RBP eCLIP11.24□□□□□ -0.61
VSIG4-202ENST00000412866 PKN1Q16512 942 aa11.24□□□□□ -0.61
VSIG4-202ENST00000412866 ARHGAP27Q6ZUM4 889 aa11.24□□□□□ -0.61
VSIG4-202ENST00000412866 FAM83AQ86UY5 434 aa11.24□□□□□ -0.61
VSIG4-202ENST00000412866 LRRC47Q8N1G4 583 aaKnown RBP11.24□□□□□ -0.61
VSIG4-202ENST00000412866 LEO1Q8WVC0 666 aaPredicted RBP11.24□□□□□ -0.61
VSIG4-202ENST00000412866 SPATA32Q96LK8 384 aa11.24□□□□□ -0.61
VSIG4-202ENST00000412866 TFIP11Q9UBB9 837 aaKnown RBP11.24□□□□□ -0.61
VSIG4-202ENST00000412866 MAD2L2Q9UI95 211 aa11.24□□□□□ -0.61
VSIG4-202ENST00000412866 HERC5Q9UII4 1024 aaKnown RBP11.24□□□□□ -0.61
VSIG4-202ENST00000412866 GJA3Q9Y6H8 435 aa11.24□□□□□ -0.61
VSIG4-202ENST00000412866 V9GY48 417 aaPredicted RBP11.24□□□□□ -0.61
VSIG4-202ENST00000412866 MMP1P03956 469 aa11.23□□□□□ -0.61
VSIG4-202ENST00000412866 PARP1P09874 1014 aaKnown RBP11.23□□□□□ -0.61
VSIG4-202ENST00000412866 SLURP2P0DP57 97 aa11.23□□□□□ -0.61
VSIG4-202ENST00000412866 NBPF9Q3BBW0 867 aa11.23□□□□□ -0.61
VSIG4-202ENST00000412866 CLEC10AQ8IUN9 316 aa11.23□□□□□ -0.61
VSIG4-202ENST00000412866 MICALL2Q8IY33 904 aa11.23□□□□□ -0.61
VSIG4-202ENST00000412866 STAG2Q8N3U4 1231 aa11.23□□□□□ -0.61
VSIG4-202ENST00000412866 MTMR7Q9Y216 660 aa11.23□□□□□ -0.61
VSIG4-202ENST00000412866 MYH6P13533 1939 aa11.22□□□□□ -0.61
VSIG4-202ENST00000412866 hCG_1642624A0A1W2PR95 340 aa11.22□□□□□ -0.61
VSIG4-202ENST00000412866 SCG2P13521 617 aa11.22□□□□□ -0.61
VSIG4-202ENST00000412866 U2AF2P26368 475 aaKnown RBP eCLIP11.22□□□□□ -0.61
VSIG4-202ENST00000412866 TNNI2P48788 182 aa11.22□□□□□ -0.61
VSIG4-202ENST00000412866 PFKFB3Q16875 520 aaPredicted RBP11.22□□□□□ -0.61
VSIG4-202ENST00000412866 ABCB5Q2M3G0 1257 aa11.22□□□□□ -0.61
VSIG4-202ENST00000412866 MYSM1Q5VVJ2 828 aa11.22□□□□□ -0.61
VSIG4-202ENST00000412866 CAVIN1Q6NZI2 390 aaKnown RBP11.22□□□□□ -0.61
VSIG4-202ENST00000412866 TMEM179Q6ZVK1 233 aa11.22□□□□□ -0.61
VSIG4-202ENST00000412866 USP28Q96RU2 1077 aa11.22□□□□□ -0.61
VSIG4-202ENST00000412866 SYT17Q9BSW7 474 aa11.22□□□□□ -0.61
VSIG4-202ENST00000412866 SPZ1Q9BXG8 430 aa11.22□□□□□ -0.61
VSIG4-202ENST00000412866 KANSL2Q9H9L4 492 aa11.22□□□□□ -0.61
VSIG4-202ENST00000412866 VPS54Q9P1Q0 977 aa11.22□□□□□ -0.61
VSIG4-202ENST00000412866 CLIP2Q9UDT6 1046 aa11.22□□□□□ -0.61
VSIG4-202ENST00000412866 KCNJ14Q9UNX9 436 aa11.22□□□□□ -0.61
VSIG4-202ENST00000412866 USP17L5A8MUK1 530 aa11.21□□□□□ -0.61
VSIG4-202ENST00000412866 KLRF2D3W0D1 207 aa11.21□□□□□ -0.61
VSIG4-202ENST00000412866 PDHBP11177 359 aa11.21□□□□□ -0.61
VSIG4-202ENST00000412866 ATP2B2Q01814 1243 aa11.21□□□□□ -0.61
VSIG4-202ENST00000412866 ICA1Q05084 483 aa11.21□□□□□ -0.61
VSIG4-202ENST00000412866 TNFAIP1Q13829 316 aa11.21□□□□□ -0.61
VSIG4-202ENST00000412866 KIF4BQ2VIQ3 1234 aa11.21□□□□□ -0.61
VSIG4-202ENST00000412866 ASPRV1Q53RT3 343 aa11.21□□□□□ -0.61
VSIG4-202ENST00000412866 RBM26Q5T8P6 1007 aaKnown RBP11.21□□□□□ -0.61
VSIG4-202ENST00000412866 USP17L2Q6R6M4 530 aa11.21□□□□□ -0.61
VSIG4-202ENST00000412866 RASGRP2Q7LDG7 609 aa11.21□□□□□ -0.61
VSIG4-202ENST00000412866 DIS3L2Q8IYB7 885 aaKnown RBP11.21□□□□□ -0.61
VSIG4-202ENST00000412866 SYAP1Q96A49 352 aaPredicted RBP11.21□□□□□ -0.61
VSIG4-202ENST00000412866 FTOQ9C0B1 505 aaKnown RBP eCLIP11.21□□□□□ -0.61
VSIG4-202ENST00000412866 TMEM39BQ9GZU3 492 aa11.21□□□□□ -0.61
VSIG4-202ENST00000412866 FOXP1Q9H334 677 aaPredicted RBP11.21□□□□□ -0.61
VSIG4-202ENST00000412866 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.21□□□□□ -0.61
VSIG4-202ENST00000412866 RTEL1Q9NZ71 1219 aa11.21□□□□□ -0.61
VSIG4-202ENST00000412866 CNOT7Q9UIV1 285 aaKnown RBP11.21□□□□□ -0.61
VSIG4-202ENST00000412866 DICER1Q9UPY3 1922 aaKnown RBP11.2□□□□□ -0.62
VSIG4-202ENST00000412866 GOLGA6L4A6NEF3 574 aa11.2□□□□□ -0.62
VSIG4-202ENST00000412866 GDF11O95390 407 aa11.2□□□□□ -0.62
VSIG4-202ENST00000412866 EGFRP00533 1210 aa11.2□□□□□ -0.62
VSIG4-202ENST00000412866 GOLGA8HP0CJ92 632 aa11.2□□□□□ -0.62
VSIG4-202ENST00000412866 SNHG28P0DPA3 235 aa11.2□□□□□ -0.62
VSIG4-202ENST00000412866 SMARCA1P28370 1054 aa11.2□□□□□ -0.62
VSIG4-202ENST00000412866 KRT2P35908 639 aa11.2□□□□□ -0.62
VSIG4-202ENST00000412866 CEBPZQ03701 1054 aaKnown RBP11.2□□□□□ -0.62
VSIG4-202ENST00000412866 SEPT2Q15019 361 aa11.2□□□□□ -0.62
VSIG4-202ENST00000412866 SHROOM1Q2M3G4 852 aaPredicted RBP11.2□□□□□ -0.62
VSIG4-202ENST00000412866 SLC35G1Q2M3R5 365 aa11.2□□□□□ -0.62
VSIG4-202ENST00000412866 NOSTRINQ8IVI9 506 aa11.2□□□□□ -0.62
VSIG4-202ENST00000412866 PIBF1Q8WXW3 757 aa11.2□□□□□ -0.62
VSIG4-202ENST00000412866 SHISA4Q96DD7 197 aa11.2□□□□□ -0.62
VSIG4-202ENST00000412866 PHF20Q9BVI0 1012 aa11.2□□□□□ -0.62
VSIG4-202ENST00000412866 BRMS1Q9HCU9 246 aa11.2□□□□□ -0.62
VSIG4-202ENST00000412866 POLR3EQ9NVU0 708 aa11.2□□□□□ -0.62
VSIG4-202ENST00000412866 NYAP2Q9P242 653 aa11.2□□□□□ -0.62
VSIG4-202ENST00000412866 RCOR1Q9UKL0 485 aa11.2□□□□□ -0.62
VSIG4-202ENST00000412866 BTBD18B2RXH4 712 aa11.19□□□□□ -0.62
VSIG4-202ENST00000412866 H7C1D1 291 aa11.19□□□□□ -0.62
VSIG4-202ENST00000412866 CYTH3O43739 400 aa11.19□□□□□ -0.62
VSIG4-202ENST00000412866 TBC1D12O60347 775 aa11.19□□□□□ -0.62
VSIG4-202ENST00000412866 YEATS4O95619 227 aa11.19□□□□□ -0.62
VSIG4-202ENST00000412866 GH2P01242 217 aa11.19□□□□□ -0.62
VSIG4-202ENST00000412866 EEF2P13639 858 aaKnown RBP11.19□□□□□ -0.62
VSIG4-202ENST00000412866 NASPP49321 788 aaPredicted RBP11.19□□□□□ -0.62
VSIG4-202ENST00000412866 TBC1D10BQ4KMP7 808 aaPredicted RBP11.19□□□□□ -0.62
VSIG4-202ENST00000412866 SAMD7Q7Z3H4 446 aa11.19□□□□□ -0.62
VSIG4-202ENST00000412866 CDAN1Q8IWY9 1227 aa11.19□□□□□ -0.62
VSIG4-202ENST00000412866 GPC2Q8N158 579 aa11.19□□□□□ -0.62
VSIG4-202ENST00000412866 MKL1Q969V6 931 aa11.19□□□□□ -0.62
VSIG4-202ENST00000412866 CABP5Q9NP86 173 aa11.19□□□□□ -0.62
VSIG4-202ENST00000412866 SH3GLB2Q9NR46 395 aa11.19□□□□□ -0.62
VSIG4-202ENST00000412866 PGAP2Q9UHJ9 254 aa11.19□□□□□ -0.62
VSIG4-202ENST00000412866 FRMPD2Q68DX3 1309 aaPredicted RBP11.19□□□□□ -0.62
VSIG4-202ENST00000412866 ZNF543Q08ER8 600 aa11.19□□□□□ -0.62
VSIG4-202ENST00000412866 RASA3Q14644 834 aa11.19□□□□□ -0.62
VSIG4-202ENST00000412866 RRP1BQ14684 758 aaKnown RBP11.19□□□□□ -0.62
VSIG4-202ENST00000412866 STK38Q15208 465 aa11.19□□□□□ -0.62
VSIG4-202ENST00000412866 CCDC96Q2M329 555 aa11.19□□□□□ -0.62
VSIG4-202ENST00000412866 ZSCAN23Q3MJ62 389 aa11.19□□□□□ -0.62
VSIG4-202ENST00000412866 TPRNQ4KMQ1 711 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms