RNA–Protein interactions for RNA: ENST00000412145.5

PTPN3-203, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

TSL 1 (best) BASIC

Gene PTPN3, Length 8,765 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-203ENST00000412145 DDX21Q9NR30 783 aaKnown RBP eCLIP8.11□□□□□ -1.11
PTPN3-203ENST00000412145 RNF216Q9NWF9 866 aaPredicted RBP8.11□□□□□ -1.11
PTPN3-203ENST00000412145 TFIP11Q9UBB9 837 aaKnown RBP8.11□□□□□ -1.11
PTPN3-203ENST00000412145 TNNQ9UQP3 1299 aa8.11□□□□□ -1.11
PTPN3-203ENST00000412145 CNPY2Q9Y2B0 182 aa8.11□□□□□ -1.11
PTPN3-203ENST00000412145 IFIH1Q9BYX4 1025 aaKnown RBP8.11□□□□□ -1.11
PTPN3-203ENST00000412145 METTL14Q9HCE5 456 aaKnown RBP8.11□□□□□ -1.11
PTPN3-203ENST00000412145 SCHIP1Q9P0W5 487 aaPredicted RBP8.11□□□□□ -1.11
PTPN3-203ENST00000412145 ZNF233A6NK53 670 aa8.11□□□□□ -1.11
PTPN3-203ENST00000412145 APOEP02649 317 aa8.11□□□□□ -1.11
PTPN3-203ENST00000412145 MTBPQ96DY7 904 aa8.11□□□□□ -1.11
PTPN3-203ENST00000412145 GOLGA8TH3BQL2 631 aa8.11□□□□□ -1.11
PTPN3-203ENST00000412145 GOLGA8HP0CJ92 632 aa8.11□□□□□ -1.11
PTPN3-203ENST00000412145 EIF3BP55884 814 aaKnown RBP8.11□□□□□ -1.11
PTPN3-203ENST00000412145 NR1H3Q13133 447 aa8.11□□□□□ -1.11
PTPN3-203ENST00000412145 ST13P4Q8IZP2 240 aaPredicted RBP8.11□□□□□ -1.11
PTPN3-203ENST00000412145 CLSTN2Q9H4D0 955 aa8.11□□□□□ -1.11
PTPN3-203ENST00000412145 NBPF10Q6P3W6 841 aaKnown RBP8.11□□□□□ -1.11
PTPN3-203ENST00000412145 ARHGEF18Q6ZSZ5 1173 aa8.11□□□□□ -1.11
PTPN3-203ENST00000412145 Q6ZUG5 572 aa8.11□□□□□ -1.11
PTPN3-203ENST00000412145 NBPF5PQ86XG9 351 aaPredicted RBP8.11□□□□□ -1.11
PTPN3-203ENST00000412145 NME9Q86XW9 330 aa8.11□□□□□ -1.11
PTPN3-203ENST00000412145 UTP18Q9Y5J1 556 aaKnown RBP eCLIP8.11□□□□□ -1.11
PTPN3-203ENST00000412145 NCKAP5LQ9HCH0 1330 aa8.11□□□□□ -1.11
PTPN3-203ENST00000412145 TBC1D8O95759 1140 aa8.11□□□□□ -1.11
PTPN3-203ENST00000412145 ZFXP17010 805 aaPredicted RBP8.11□□□□□ -1.11
PTPN3-203ENST00000412145 ARID5AQ03989 594 aa8.11□□□□□ -1.11
PTPN3-203ENST00000412145 PSMD6Q15008 389 aa8.11□□□□□ -1.11
PTPN3-203ENST00000412145 TMTC3Q6ZXV5 915 aa8.11□□□□□ -1.11
PTPN3-203ENST00000412145 RPAINQ86UA6 219 aa8.11□□□□□ -1.11
PTPN3-203ENST00000412145 TRIM50Q86XT4 487 aa8.11□□□□□ -1.11
PTPN3-203ENST00000412145 HOMEZQ8IX15 550 aa8.11□□□□□ -1.11
PTPN3-203ENST00000412145 ANKRD44Q8N8A2 993 aa8.11□□□□□ -1.11
PTPN3-203ENST00000412145 ACSBG1Q96GR2 724 aa8.11□□□□□ -1.11
PTPN3-203ENST00000412145 UPF3AQ9H1J1 476 aaKnown RBP8.11□□□□□ -1.11
PTPN3-203ENST00000412145 MAP3K2Q9Y2U5 619 aa8.11□□□□□ -1.11
PTPN3-203ENST00000412145 RBM8AQ9Y5S9 174 aaKnown RBP8.11□□□□□ -1.11
PTPN3-203ENST00000412145 INSRP06213 1382 aa8.11□□□□□ -1.11
PTPN3-203ENST00000412145 ESYT2A0FGR8 921 aa8.11□□□□□ -1.11
PTPN3-203ENST00000412145 GOLGA8JA6NMD2 632 aa8.11□□□□□ -1.11
PTPN3-203ENST00000412145 HNRNPCL2B2RXH8 293 aa8.11□□□□□ -1.11
PTPN3-203ENST00000412145 TMEM232C9JQI7 657 aa8.11□□□□□ -1.11
PTPN3-203ENST00000412145 BACH1O14867 736 aa8.11□□□□□ -1.11
PTPN3-203ENST00000412145 HNRNPCL1O60812 293 aaKnown RBP8.11□□□□□ -1.11
PTPN3-203ENST00000412145 RFC4P35249 363 aa8.11□□□□□ -1.11
PTPN3-203ENST00000412145 SERPINB10P48595 397 aa8.11□□□□□ -1.11
PTPN3-203ENST00000412145 HDAC4P56524 1084 aa8.11□□□□□ -1.11
PTPN3-203ENST00000412145 ZSCAN26Q16670 478 aa8.11□□□□□ -1.11
PTPN3-203ENST00000412145 CSGALNACT2Q8N6G5 542 aa8.11□□□□□ -1.11
PTPN3-203ENST00000412145 CAPS2Q9BXY5 557 aa8.11□□□□□ -1.11
PTPN3-203ENST00000412145 NACA2Q9H009 215 aa8.11□□□□□ -1.11
PTPN3-203ENST00000412145 ARAP1Q96P48 1450 aa8.1□□□□□ -1.11
PTPN3-203ENST00000412145 CYP7A1P22680 504 aa8.1□□□□□ -1.11
PTPN3-203ENST00000412145 GRIN1Q05586 938 aa8.1□□□□□ -1.11
PTPN3-203ENST00000412145 MMEL1Q495T6 779 aa8.1□□□□□ -1.11
PTPN3-203ENST00000412145 OR9Q1Q8NGQ5 310 aa8.1□□□□□ -1.11
PTPN3-203ENST00000412145 TMX1Q9H3N1 280 aa8.1□□□□□ -1.11
PTPN3-203ENST00000412145 WASLO00401 505 aaPredicted RBP8.1□□□□□ -1.11
PTPN3-203ENST00000412145 CA8P35219 290 aa8.1□□□□□ -1.11
PTPN3-203ENST00000412145 CXorf38Q8TB03 319 aa8.1□□□□□ -1.11
PTPN3-203ENST00000412145 ENOX1Q8TC92 643 aaKnown RBP8.1□□□□□ -1.11
PTPN3-203ENST00000412145 LRRC8CQ8TDW0 803 aa8.1□□□□□ -1.11
PTPN3-203ENST00000412145 HAUS4Q9H6D7 363 aa8.1□□□□□ -1.11
PTPN3-203ENST00000412145 DENND2AQ9ULE3 1009 aa8.1□□□□□ -1.11
PTPN3-203ENST00000412145 CDK13Q14004 1512 aaKnown RBP8.1□□□□□ -1.11
PTPN3-203ENST00000412145 KRT4P19013 534 aa8.1□□□□□ -1.11
PTPN3-203ENST00000412145 OTUD6AQ7L8S5 288 aa8.1□□□□□ -1.11
PTPN3-203ENST00000412145 PATL1Q86TB9 770 aaKnown RBP8.1□□□□□ -1.11
PTPN3-203ENST00000412145 PHLPP2Q6ZVD8 1323 aa8.1□□□□□ -1.11
PTPN3-203ENST00000412145 MYL1P05976 194 aa8.1□□□□□ -1.11
PTPN3-203ENST00000412145 GSTA1P08263 222 aa8.1□□□□□ -1.11
PTPN3-203ENST00000412145 GSTA2P09210 222 aa8.1□□□□□ -1.11
PTPN3-203ENST00000412145 XRCC6P12956 609 aaKnown RBP eCLIP8.1□□□□□ -1.11
PTPN3-203ENST00000412145 PDE1AP54750 535 aa8.1□□□□□ -1.11
PTPN3-203ENST00000412145 OCA2Q04671 838 aa8.1□□□□□ -1.11
PTPN3-203ENST00000412145 CCDC197Q8NCU1 140 aa8.1□□□□□ -1.11
PTPN3-203ENST00000412145 PIP4K2CQ8TBX8 421 aa8.1□□□□□ -1.11
PTPN3-203ENST00000412145 CEP19Q96LK0 163 aa8.1□□□□□ -1.11
PTPN3-203ENST00000412145 TOP2BQ02880 1626 aa8.1□□□□□ -1.11
PTPN3-203ENST00000412145 NAIPQ13075 1403 aa8.1□□□□□ -1.11
PTPN3-203ENST00000412145 STAM2O75886 525 aa8.1□□□□□ -1.11
PTPN3-203ENST00000412145 NEK2P51955 445 aa8.1□□□□□ -1.11
PTPN3-203ENST00000412145 CDC37L1Q7L3B6 337 aa8.1□□□□□ -1.11
PTPN3-203ENST00000412145 POLR3CQ9BUI4 534 aaPredicted RBP8.1□□□□□ -1.11
PTPN3-203ENST00000412145 EFCC1Q9HA90 598 aa8.1□□□□□ -1.11
PTPN3-203ENST00000412145 BAIAP2L1Q9UHR4 511 aa8.1□□□□□ -1.11
PTPN3-203ENST00000412145 KCNH3Q9ULD8 1083 aa8.1□□□□□ -1.11
PTPN3-203ENST00000412145 SYNJ1O43426 1573 aa8.1□□□□□ -1.11
PTPN3-203ENST00000412145 ARHGEF35A5YM69 484 aa8.1□□□□□ -1.11
PTPN3-203ENST00000412145 HNRNPRO43390 633 aaKnown RBP8.1□□□□□ -1.11
PTPN3-203ENST00000412145 NLRP3Q96P20 1036 aa8.1□□□□□ -1.11
PTPN3-203ENST00000412145 TRIM6Q9C030 488 aaPredicted RBP8.1□□□□□ -1.11
PTPN3-203ENST00000412145 CUEDC2Q9H467 287 aa8.1□□□□□ -1.11
PTPN3-203ENST00000412145 DDX41Q9UJV9 622 aaKnown RBP8.1□□□□□ -1.11
PTPN3-203ENST00000412145 MAGI1Q96QZ7 1491 aaPredicted RBP8.1□□□□□ -1.11
PTPN3-203ENST00000412145 PSMA3P25788 255 aa8.1□□□□□ -1.11
PTPN3-203ENST00000412145 RASSF7Q02833 373 aa8.1□□□□□ -1.11
PTPN3-203ENST00000412145 CASC4Q6P4E1 433 aa8.1□□□□□ -1.11
PTPN3-203ENST00000412145 RNF207Q6ZRF8 634 aa8.1□□□□□ -1.11
PTPN3-203ENST00000412145 RETREG2Q8NC44 543 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms