RNA–Protein interactions for RNA: ENST00000403276.7

CSNK1D-205, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 1,040 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-205ENST00000403276 NUCB1Q02818 461 aa20.08■□□□□ 0.81
CSNK1D-205ENST00000403276 IRF5Q13568 498 aa20.08■□□□□ 0.81
CSNK1D-205ENST00000403276 SPICE1Q8N0Z3 855 aa20.08■□□□□ 0.81
CSNK1D-205ENST00000403276 GNL3Q9BVP2 549 aaKnown RBP eCLIP20.08■□□□□ 0.81
CSNK1D-205ENST00000403276 TMX2Q9Y320 296 aa20.08■□□□□ 0.81
CSNK1D-205ENST00000403276 MYH4Q9Y623 1939 aa20.08■□□□□ 0.8
CSNK1D-205ENST00000403276 PARP14Q460N5 1801 aa20.07■□□□□ 0.8
CSNK1D-205ENST00000403276 PRDM1O75626 825 aa20.07■□□□□ 0.8
CSNK1D-205ENST00000403276 UBXN2AP68543 259 aa20.07■□□□□ 0.8
CSNK1D-205ENST00000403276 PLEKHM2Q8IWE5 1019 aa20.07■□□□□ 0.8
CSNK1D-205ENST00000403276 PXYLP1Q8TE99 480 aa20.07■□□□□ 0.8
CSNK1D-205ENST00000403276 GTF3C2Q8WUA4 911 aaPredicted RBP20.07■□□□□ 0.8
CSNK1D-205ENST00000403276 ROBO3Q96MS0 1386 aa20.07■□□□□ 0.8
CSNK1D-205ENST00000403276 SPDYE16A6NNV3 312 aaPredicted RBP20.06■□□□□ 0.8
CSNK1D-205ENST00000403276 TRIM6-TRIM34B2RNG4 842 aa20.06■□□□□ 0.8
CSNK1D-205ENST00000403276 INHAP05111 366 aa20.06■□□□□ 0.8
CSNK1D-205ENST00000403276 CCAR1Q8IX12 1150 aaKnown RBP20.06■□□□□ 0.8
CSNK1D-205ENST00000403276 RILPL2Q969X0 211 aa20.06■□□□□ 0.8
CSNK1D-205ENST00000403276 FAM227BQ96M60 508 aa20.06■□□□□ 0.8
CSNK1D-205ENST00000403276 NACAP1Q9BZK3 213 aa20.06■□□□□ 0.8
CSNK1D-205ENST00000403276 TANGO6Q9C0B7 1094 aa20.06■□□□□ 0.8
CSNK1D-205ENST00000403276 RNF208Q9H0X6 261 aa20.06■□□□□ 0.8
CSNK1D-205ENST00000403276 NAPBQ9H115 298 aa20.06■□□□□ 0.8
CSNK1D-205ENST00000403276 UNC93B1Q9H1C4 597 aa20.06■□□□□ 0.8
CSNK1D-205ENST00000403276 KANSL2Q9H9L4 492 aa20.06■□□□□ 0.8
CSNK1D-205ENST00000403276 BTBD7Q9P203 1132 aa20.06■□□□□ 0.8
CSNK1D-205ENST00000403276 RABGAP1Q9Y3P9 1069 aa20.06■□□□□ 0.8
CSNK1D-205ENST00000403276 COL11A1P12107 1806 aaPredicted RBP20.05■□□□□ 0.8
CSNK1D-205ENST00000403276 FOXP2O15409 715 aa20.05■□□□□ 0.8
CSNK1D-205ENST00000403276 CYP2B6P20813 491 aa20.05■□□□□ 0.8
CSNK1D-205ENST00000403276 VPS53Q5VIR6 699 aa20.05■□□□□ 0.8
CSNK1D-205ENST00000403276 SH2D4AQ9H788 454 aa20.05■□□□□ 0.8
CSNK1D-205ENST00000403276 VCPKMTQ9H867 229 aa20.05■□□□□ 0.8
CSNK1D-205ENST00000403276 RAD21O60216 631 aa20.04■□□□□ 0.8
CSNK1D-205ENST00000403276 MAPK4P31152 587 aa20.04■□□□□ 0.8
CSNK1D-205ENST00000403276 COG2Q14746 738 aa20.04■□□□□ 0.8
CSNK1D-205ENST00000403276 SAMD1Q6SPF0 538 aaPredicted RBP20.04■□□□□ 0.8
CSNK1D-205ENST00000403276 LBX2Q6XYB7 198 aa20.04■□□□□ 0.8
CSNK1D-205ENST00000403276 GPR142Q7Z601 462 aa20.04■□□□□ 0.8
CSNK1D-205ENST00000403276 A0A0D9SFI3 127 aa20.03■□□□□ 0.8
CSNK1D-205ENST00000403276 PPARAQ07869 468 aa20.03■□□□□ 0.8
CSNK1D-205ENST00000403276 TRIM32Q13049 653 aa20.03■□□□□ 0.8
CSNK1D-205ENST00000403276 WDR78Q5VTH9 848 aa20.03■□□□□ 0.8
CSNK1D-205ENST00000403276 PLEKHH3Q7Z736 793 aa20.03■□□□□ 0.8
CSNK1D-205ENST00000403276 ZNF444Q8N0Y2 327 aaPredicted RBP20.03■□□□□ 0.8
CSNK1D-205ENST00000403276 LPAR1Q92633 364 aa20.03■□□□□ 0.8
CSNK1D-205ENST00000403276 SHISA4Q96DD7 197 aa20.03■□□□□ 0.8
CSNK1D-205ENST00000403276 NUDT12Q9BQG2 462 aa20.03■□□□□ 0.8
CSNK1D-205ENST00000403276 CWC22Q9HCG8 908 aaKnown RBP20.03■□□□□ 0.8
CSNK1D-205ENST00000403276 INCENPQ9NQS7 918 aa20.03■□□□□ 0.8
CSNK1D-205ENST00000403276 HELLSQ9NRZ9 838 aa20.03■□□□□ 0.8
CSNK1D-205ENST00000403276 HOXC10Q9NYD6 342 aa20.03■□□□□ 0.8
CSNK1D-205ENST00000403276 FLOT1O75955 427 aa20.02■□□□□ 0.8
CSNK1D-205ENST00000403276 GJB1P08034 283 aa20.02■□□□□ 0.8
CSNK1D-205ENST00000403276 DSG3P32926 999 aa20.02■□□□□ 0.8
CSNK1D-205ENST00000403276 NMIQ13287 307 aaPredicted RBP20.02■□□□□ 0.8
CSNK1D-205ENST00000403276 OSBPL3Q9H4L5 887 aa20.02■□□□□ 0.8
CSNK1D-205ENST00000403276 ZNFX1Q9P2E3 1918 aaKnown RBP20.02■□□□□ 0.79
CSNK1D-205ENST00000403276 WDR46O15213 610 aaKnown RBP20.01■□□□□ 0.79
CSNK1D-205ENST00000403276 CCNA1P78396 465 aa20.01■□□□□ 0.79
CSNK1D-205ENST00000403276 CTDSPL2Q05D32 466 aa20.01■□□□□ 0.79
CSNK1D-205ENST00000403276 MCMDC2Q4G0Z9 681 aa20.01■□□□□ 0.79
CSNK1D-205ENST00000403276 FAM47AQ5JRC9 791 aa20.01■□□□□ 0.79
CSNK1D-205ENST00000403276 MORN1Q5T089 497 aa20.01■□□□□ 0.79
CSNK1D-205ENST00000403276 ATG4CQ96DT6 458 aa20.01■□□□□ 0.79
CSNK1D-205ENST00000403276 CLIP2Q9UDT6 1046 aa20.01■□□□□ 0.79
CSNK1D-205ENST00000403276 A0A0G2JMZ2 1700 aa20.01■□□□□ 0.79
CSNK1D-205ENST00000403276 IGKV6D-41A0A0C4DH26 115 aa20■□□□□ 0.79
CSNK1D-205ENST00000403276 GJA8P48165 433 aa20■□□□□ 0.79
CSNK1D-205ENST00000403276 PDE4BQ07343 736 aa20■□□□□ 0.79
CSNK1D-205ENST00000403276 ZNF589Q86UQ0 364 aaPredicted RBP20■□□□□ 0.79
CSNK1D-205ENST00000403276 U2AF1L4Q8WU68 220 aaKnown RBP20■□□□□ 0.79
CSNK1D-205ENST00000403276 TRIB2Q92519 343 aa20■□□□□ 0.79
CSNK1D-205ENST00000403276 USP6NLQ92738 828 aa20■□□□□ 0.79
CSNK1D-205ENST00000403276 ZNF287Q9HBT7 754 aa20■□□□□ 0.79
CSNK1D-205ENST00000403276 GOPCQ9HD26 462 aa20■□□□□ 0.79
CSNK1D-205ENST00000403276 FBXO28Q9NVF7 368 aa20■□□□□ 0.79
CSNK1D-205ENST00000403276 NYAP2Q9P242 653 aa20■□□□□ 0.79
CSNK1D-205ENST00000403276 TACC3Q9Y6A5 838 aa20■□□□□ 0.79
CSNK1D-205ENST00000403276 HMGCRP04035 888 aa19.99■□□□□ 0.79
CSNK1D-205ENST00000403276 SLC3A2P08195 630 aaKnown RBP19.99■□□□□ 0.79
CSNK1D-205ENST00000403276 SDSP20132 328 aa19.99■□□□□ 0.79
CSNK1D-205ENST00000403276 TFAP4Q01664 338 aa19.99■□□□□ 0.79
CSNK1D-205ENST00000403276 CCL14Q16627 93 aa19.99■□□□□ 0.79
CSNK1D-205ENST00000403276 FAM83BQ5T0W9 1011 aa19.99■□□□□ 0.79
CSNK1D-205ENST00000403276 SOCS4Q8WXH5 440 aa19.99■□□□□ 0.79
CSNK1D-205ENST00000403276 CEP95Q96GE4 821 aa19.99■□□□□ 0.79
CSNK1D-205ENST00000403276 NUP88Q99567 741 aaPredicted RBP19.99■□□□□ 0.79
CSNK1D-205ENST00000403276 MOV10L1Q9BXT6 1211 aaKnown RBP19.99■□□□□ 0.79
CSNK1D-205ENST00000403276 SGPL1O95470 568 aa19.98■□□□□ 0.79
CSNK1D-205ENST00000403276 TSPY3P0CV98 308 aa19.98■□□□□ 0.79
CSNK1D-205ENST00000403276 TSPY8P0CW00 308 aa19.98■□□□□ 0.79
CSNK1D-205ENST00000403276 PTPREP23469 700 aa19.98■□□□□ 0.79
CSNK1D-205ENST00000403276 PDE4AP27815 886 aa19.98■□□□□ 0.79
CSNK1D-205ENST00000403276 PLS1Q14651 629 aa19.98■□□□□ 0.79
CSNK1D-205ENST00000403276 NKX2-3Q8TAU0 364 aa19.98■□□□□ 0.79
CSNK1D-205ENST00000403276 DEFB118Q96PH6 123 aa19.98■□□□□ 0.79
CSNK1D-205ENST00000403276 SPATC1LQ9H0A9 340 aa19.98■□□□□ 0.79
CSNK1D-205ENST00000403276 F5H6K3 240 aa19.97■□□□□ 0.79
CSNK1D-205ENST00000403276 FGAP02671 866 aa19.97■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms