RNA–Protein interactions for RNA: ENST00000399641.5

CACNA1C-217, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,511 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-217ENST00000399641 KRT15P19012 456 aa12.28□□□□□ -0.44
CACNA1C-217ENST00000399641 GTF2IP78347 998 aa12.28□□□□□ -0.44
CACNA1C-217ENST00000399641 CWF19L2Q2TBE0 894 aaKnown RBP12.28□□□□□ -0.44
CACNA1C-217ENST00000399641 HABP4Q5JVS0 413 aaKnown RBP12.28□□□□□ -0.44
CACNA1C-217ENST00000399641 MBIPQ9NS73 344 aa12.28□□□□□ -0.44
CACNA1C-217ENST00000399641 MYO1AQ9UBC5 1043 aa12.28□□□□□ -0.44
CACNA1C-217ENST00000399641 CNPY2Q9Y2B0 182 aa12.28□□□□□ -0.44
CACNA1C-217ENST00000399641 NOS1P29475 1434 aa12.28□□□□□ -0.44
CACNA1C-217ENST00000399641 RPSAP08865 295 aaKnown RBP12.28□□□□□ -0.44
CACNA1C-217ENST00000399641 KCNA6P17658 529 aa12.28□□□□□ -0.44
CACNA1C-217ENST00000399641 MCM4P33991 863 aa12.28□□□□□ -0.44
CACNA1C-217ENST00000399641 TSPY1Q01534 308 aa12.28□□□□□ -0.44
CACNA1C-217ENST00000399641 SESTD1Q86VW0 696 aa12.28□□□□□ -0.44
CACNA1C-217ENST00000399641 BTN2A2Q8WVV5 523 aa12.28□□□□□ -0.44
CACNA1C-217ENST00000399641 ORC3Q9UBD5 711 aaPredicted RBP12.28□□□□□ -0.44
CACNA1C-217ENST00000399641 GNA11P29992 359 aa12.28□□□□□ -0.44
CACNA1C-217ENST00000399641 KRT80Q6KB66 452 aa12.28□□□□□ -0.44
CACNA1C-217ENST00000399641 POLIQ9UNA4 740 aa12.28□□□□□ -0.44
CACNA1C-217ENST00000399641 ATP5DP30049 168 aa12.27□□□□□ -0.44
CACNA1C-217ENST00000399641 ECHDC1Q9NTX5 307 aa12.27□□□□□ -0.44
CACNA1C-217ENST00000399641 RNF181Q9P0P0 153 aa12.27□□□□□ -0.44
CACNA1C-217ENST00000399641 UTP11Q9Y3A2 253 aaKnown RBP12.27□□□□□ -0.44
CACNA1C-217ENST00000399641 RIPOR2Q9Y4F9 1068 aa12.27□□□□□ -0.44
CACNA1C-217ENST00000399641 IGBP1P78318 339 aa12.27□□□□□ -0.45
CACNA1C-217ENST00000399641 GNPTABQ3T906 1256 aa12.27□□□□□ -0.45
CACNA1C-217ENST00000399641 RSBN1LQ6PCB5 846 aaPredicted RBP12.27□□□□□ -0.45
CACNA1C-217ENST00000399641 KLHL7Q8IXQ5 586 aa12.27□□□□□ -0.45
CACNA1C-217ENST00000399641 PPP1R9AQ9ULJ8 1098 aa12.27□□□□□ -0.45
CACNA1C-217ENST00000399641 ZBTB7AO95365 584 aa12.27□□□□□ -0.45
CACNA1C-217ENST00000399641 FLOT2Q14254 428 aa12.27□□□□□ -0.45
CACNA1C-217ENST00000399641 CDC37L1Q7L3B6 337 aa12.27□□□□□ -0.45
CACNA1C-217ENST00000399641 SMAD5Q99717 465 aaKnown RBP12.27□□□□□ -0.45
CACNA1C-217ENST00000399641 USP40Q9NVE5 1235 aa12.27□□□□□ -0.45
CACNA1C-217ENST00000399641 TTF2Q9UNY4 1162 aaKnown RBP12.27□□□□□ -0.45
CACNA1C-217ENST00000399641 IQANK1A0A1B0GTG1 560 aa12.27□□□□□ -0.45
CACNA1C-217ENST00000399641 HNRNPCP07910 306 aaKnown RBP eCLIP12.27□□□□□ -0.45
CACNA1C-217ENST00000399641 SYT1P21579 422 aa12.27□□□□□ -0.45
CACNA1C-217ENST00000399641 PPP2R5EQ16537 467 aa12.27□□□□□ -0.45
CACNA1C-217ENST00000399641 NLRX1Q86UT6 975 aa12.27□□□□□ -0.45
CACNA1C-217ENST00000399641 OTULINQ96BN8 352 aa12.27□□□□□ -0.45
CACNA1C-217ENST00000399641 SUGT1Q9Y2Z0 365 aa12.27□□□□□ -0.45
CACNA1C-217ENST00000399641 ASXL2Q76L83 1435 aa12.27□□□□□ -0.45
CACNA1C-217ENST00000399641 CCDC102BQ68D86 513 aa12.27□□□□□ -0.45
CACNA1C-217ENST00000399641 TEKT1Q969V4 418 aa12.27□□□□□ -0.45
CACNA1C-217ENST00000399641 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.27□□□□□ -0.45
CACNA1C-217ENST00000399641 SPON1Q9HCB6 807 aa12.26□□□□□ -0.45
CACNA1C-217ENST00000399641 RMND1Q9NWS8 449 aa12.26□□□□□ -0.45
CACNA1C-217ENST00000399641 MOSPD1Q9UJG1 213 aa12.26□□□□□ -0.45
CACNA1C-217ENST00000399641 SYT10Q6XYQ8 523 aa12.26□□□□□ -0.45
CACNA1C-217ENST00000399641 CTAGE3PQ8IX95 158 aa12.26□□□□□ -0.45
CACNA1C-217ENST00000399641 RBM46Q8TBY0 533 aaKnown RBP12.26□□□□□ -0.45
CACNA1C-217ENST00000399641 UBN1Q9NPG3 1134 aa12.26□□□□□ -0.45
CACNA1C-217ENST00000399641 CTNND2Q9UQB3 1225 aa12.26□□□□□ -0.45
CACNA1C-217ENST00000399641 KIAA0586Q9BVV6 1533 aa12.26□□□□□ -0.45
CACNA1C-217ENST00000399641 TYW5A2RUC4 315 aaKnown RBP12.26□□□□□ -0.45
CACNA1C-217ENST00000399641 PYGLP06737 847 aa12.26□□□□□ -0.45
CACNA1C-217ENST00000399641 U2AF2P26368 475 aaKnown RBP eCLIP12.26□□□□□ -0.45
CACNA1C-217ENST00000399641 ARHGEF10O15013 1369 aa12.26□□□□□ -0.45
CACNA1C-217ENST00000399641 INPP5BP32019 993 aa12.26□□□□□ -0.45
CACNA1C-217ENST00000399641 SYKP43405 635 aa12.26□□□□□ -0.45
CACNA1C-217ENST00000399641 MUM1L1Q5H9M0 696 aa12.26□□□□□ -0.45
CACNA1C-217ENST00000399641 FSCBQ5H9T9 825 aa12.26□□□□□ -0.45
CACNA1C-217ENST00000399641 PPIP5K1Q6PFW1 1433 aa12.26□□□□□ -0.45
CACNA1C-217ENST00000399641 CCDC138Q96M89 665 aa12.26□□□□□ -0.45
CACNA1C-217ENST00000399641 RBSNQ9H1K0 784 aa12.26□□□□□ -0.45
CACNA1C-217ENST00000399641 ASIC3Q9UHC3 531 aa12.26□□□□□ -0.45
CACNA1C-217ENST00000399641 ANGPTL3Q9Y5C1 460 aa12.26□□□□□ -0.45
CACNA1C-217ENST00000399641 SH3TC1Q8TE82 1336 aa12.26□□□□□ -0.45
CACNA1C-217ENST00000399641 SLC1A4P43007 532 aa12.26□□□□□ -0.45
CACNA1C-217ENST00000399641 YARSP54577 528 aaKnown RBP12.26□□□□□ -0.45
CACNA1C-217ENST00000399641 SLITRK6Q9H5Y7 841 aa12.26□□□□□ -0.45
CACNA1C-217ENST00000399641 ADGRF5Q8IZF2 1346 aa12.25□□□□□ -0.45
CACNA1C-217ENST00000399641 KLF18A0A0U1RQI7 1052 aa12.25□□□□□ -0.45
CACNA1C-217ENST00000399641 ELF1P32519 619 aa12.25□□□□□ -0.45
CACNA1C-217ENST00000399641 ARPP19P56211 112 aa12.25□□□□□ -0.45
CACNA1C-217ENST00000399641 KRT33BQ14525 404 aa12.25□□□□□ -0.45
CACNA1C-217ENST00000399641 SCYL2Q6P3W7 929 aa12.25□□□□□ -0.45
CACNA1C-217ENST00000399641 MTRQ99707 1265 aa12.25□□□□□ -0.45
CACNA1C-217ENST00000399641 HACD3Q9P035 362 aa12.25□□□□□ -0.45
CACNA1C-217ENST00000399641 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.25□□□□□ -0.45
CACNA1C-217ENST00000399641 PTPRCP08575 1304 aa12.25□□□□□ -0.45
CACNA1C-217ENST00000399641 H3BRJ5 948 aa12.25□□□□□ -0.45
CACNA1C-217ENST00000399641 ANO4Q32M45 955 aa12.25□□□□□ -0.45
CACNA1C-217ENST00000399641 TSHZ3Q63HK5 1081 aa12.25□□□□□ -0.45
CACNA1C-217ENST00000399641 TRIM59Q8IWR1 403 aa12.25□□□□□ -0.45
CACNA1C-217ENST00000399641 S100BP04271 92 aaPredicted RBP12.25□□□□□ -0.45
CACNA1C-217ENST00000399641 CCDC159P0C7I6 412 aa12.25□□□□□ -0.45
CACNA1C-217ENST00000399641 PIDD1Q9HB75 910 aa12.25□□□□□ -0.45
CACNA1C-217ENST00000399641 CFBP00751 764 aa12.25□□□□□ -0.45
CACNA1C-217ENST00000399641 KRT14P02533 472 aa12.25□□□□□ -0.45
CACNA1C-217ENST00000399641 ZSCAN20P17040 1043 aaPredicted RBP12.25□□□□□ -0.45
CACNA1C-217ENST00000399641 TTLL7Q6ZT98 887 aa12.25□□□□□ -0.45
CACNA1C-217ENST00000399641 SYNDIG1Q9H7V2 258 aa12.25□□□□□ -0.45
CACNA1C-217ENST00000399641 TESPA1A2RU30 521 aaPredicted RBP12.25□□□□□ -0.45
CACNA1C-217ENST00000399641 SKILP12757 684 aa12.25□□□□□ -0.45
CACNA1C-217ENST00000399641 DDX42Q86XP3 938 aaKnown RBP eCLIP12.25□□□□□ -0.45
CACNA1C-217ENST00000399641 PPP4R1Q8TF05 950 aa12.25□□□□□ -0.45
CACNA1C-217ENST00000399641 ATP6V1E2Q96A05 226 aa12.25□□□□□ -0.45
CACNA1C-217ENST00000399641 CCDC42Q96M95 316 aa12.25□□□□□ -0.45
CACNA1C-217ENST00000399641 MTIF3Q9H2K0 278 aaKnown RBP12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms