RNA–Protein interactions for RNA: ENST00000399299.5

SMIM11A-203, Transcript of small integral membrane protein 11A, humanhuman

TSL 1 (best) BASIC

Gene SMIM11A, Length 1,033 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11A-203ENST00000399299 MYCP01106 439 aaPredicted RBP17.77■□□□□ 0.44
SMIM11A-203ENST00000399299 APPP05067 770 aa17.77■□□□□ 0.44
SMIM11A-203ENST00000399299 GJB1P08034 283 aa17.77■□□□□ 0.44
SMIM11A-203ENST00000399299 ELNP15502 786 aa17.77■□□□□ 0.44
SMIM11A-203ENST00000399299 RASA1P20936 1047 aa17.77■□□□□ 0.44
SMIM11A-203ENST00000399299 CCNA1P78396 465 aa17.77■□□□□ 0.44
SMIM11A-203ENST00000399299 Q3C1V9 767 aa17.77■□□□□ 0.44
SMIM11A-203ENST00000399299 CLEC10AQ8IUN9 316 aa17.77■□□□□ 0.44
SMIM11A-203ENST00000399299 NKX2-3Q8TAU0 364 aa17.77■□□□□ 0.44
SMIM11A-203ENST00000399299 ZNF287Q9HBT7 754 aa17.77■□□□□ 0.44
SMIM11A-203ENST00000399299 PEX10O60683 326 aa17.76■□□□□ 0.43
SMIM11A-203ENST00000399299 IGHDP01880 384 aa17.76■□□□□ 0.43
SMIM11A-203ENST00000399299 INHAP05111 366 aa17.76■□□□□ 0.43
SMIM11A-203ENST00000399299 NUCB1Q02818 461 aa17.76■□□□□ 0.43
SMIM11A-203ENST00000399299 COG2Q14746 738 aa17.76■□□□□ 0.43
SMIM11A-203ENST00000399299 KIAA1755Q5JYT7 1200 aa17.76■□□□□ 0.43
SMIM11A-203ENST00000399299 CHD1LQ86WJ1 897 aa17.76■□□□□ 0.43
SMIM11A-203ENST00000399299 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.76■□□□□ 0.43
SMIM11A-203ENST00000399299 PORCNQ9H237 461 aa17.76■□□□□ 0.43
SMIM11A-203ENST00000399299 MKNK2Q9HBH9 465 aa17.76■□□□□ 0.43
SMIM11A-203ENST00000399299 HOXC10Q9NYD6 342 aa17.76■□□□□ 0.43
SMIM11A-203ENST00000399299 WDR46O15213 610 aaKnown RBP17.75■□□□□ 0.43
SMIM11A-203ENST00000399299 HMGCRP04035 888 aa17.75■□□□□ 0.43
SMIM11A-203ENST00000399299 XRCC5P13010 732 aaKnown RBP17.75■□□□□ 0.43
SMIM11A-203ENST00000399299 EEF2P13639 858 aaKnown RBP17.75■□□□□ 0.43
SMIM11A-203ENST00000399299 CAPN2P17655 700 aa17.75■□□□□ 0.43
SMIM11A-203ENST00000399299 GJA8P48165 433 aa17.75■□□□□ 0.43
SMIM11A-203ENST00000399299 B4GALNT3Q6L9W6 998 aa17.75■□□□□ 0.43
SMIM11A-203ENST00000399299 GPR142Q7Z601 462 aa17.75■□□□□ 0.43
SMIM11A-203ENST00000399299 CCAR1Q8IX12 1150 aaKnown RBP17.75■□□□□ 0.43
SMIM11A-203ENST00000399299 SHISA4Q96DD7 197 aa17.75■□□□□ 0.43
SMIM11A-203ENST00000399299 NUDT12Q9BQG2 462 aa17.75■□□□□ 0.43
SMIM11A-203ENST00000399299 TANGO6Q9C0B7 1094 aa17.75■□□□□ 0.43
SMIM11A-203ENST00000399299 RNF208Q9H0X6 261 aa17.75■□□□□ 0.43
SMIM11A-203ENST00000399299 NAPBQ9H115 298 aa17.75■□□□□ 0.43
SMIM11A-203ENST00000399299 OSBPL3Q9H4L5 887 aa17.75■□□□□ 0.43
SMIM11A-203ENST00000399299 MYH4Q9Y623 1939 aa17.74■□□□□ 0.43
SMIM11A-203ENST00000399299 PLEKHH3Q7Z736 793 aa17.74■□□□□ 0.43
SMIM11A-203ENST00000399299 USP6NLQ92738 828 aa17.74■□□□□ 0.43
SMIM11A-203ENST00000399299 UNC93B1Q9H1C4 597 aa17.74■□□□□ 0.43
SMIM11A-203ENST00000399299 GOPCQ9HD26 462 aa17.74■□□□□ 0.43
SMIM11A-203ENST00000399299 HELLSQ9NRZ9 838 aa17.74■□□□□ 0.43
SMIM11A-203ENST00000399299 BTBD7Q9P203 1132 aa17.74■□□□□ 0.43
SMIM11A-203ENST00000399299 ZNF236Q9UL36 1845 aa17.73■□□□□ 0.43
SMIM11A-203ENST00000399299 FOXP2O15409 715 aa17.73■□□□□ 0.43
SMIM11A-203ENST00000399299 MORN1Q5T089 497 aa17.73■□□□□ 0.43
SMIM11A-203ENST00000399299 PRPF38BQ5VTL8 546 aaKnown RBP17.73■□□□□ 0.43
SMIM11A-203ENST00000399299 TRMT44Q8IYL2 757 aaKnown RBP17.73■□□□□ 0.43
SMIM11A-203ENST00000399299 MB21D1Q8N884 522 aa17.73■□□□□ 0.43
SMIM11A-203ENST00000399299 PAK6Q9NQU5 681 aaPredicted RBP17.73■□□□□ 0.43
SMIM11A-203ENST00000399299 NYAP2Q9P242 653 aa17.73■□□□□ 0.43
SMIM11A-203ENST00000399299 PLIN4Q96Q06 1357 aa17.73■□□□□ 0.43
SMIM11A-203ENST00000399299 IGKV6D-41A0A0C4DH26 115 aa17.72■□□□□ 0.43
SMIM11A-203ENST00000399299 SLC3A2P08195 630 aaKnown RBP17.72■□□□□ 0.43
SMIM11A-203ENST00000399299 DSG3P32926 999 aa17.72■□□□□ 0.43
SMIM11A-203ENST00000399299 ATP2B2Q01814 1243 aa17.72■□□□□ 0.43
SMIM11A-203ENST00000399299 PDE4BQ07343 736 aa17.72■□□□□ 0.43
SMIM11A-203ENST00000399299 PPARAQ07869 468 aa17.72■□□□□ 0.43
SMIM11A-203ENST00000399299 CCDC129Q6ZRS4 1044 aa17.72■□□□□ 0.43
SMIM11A-203ENST00000399299 PLEKHM2Q8IWE5 1019 aa17.72■□□□□ 0.43
SMIM11A-203ENST00000399299 SPICE1Q8N0Z3 855 aa17.72■□□□□ 0.43
SMIM11A-203ENST00000399299 U2AF1L4Q8WU68 220 aaKnown RBP17.72■□□□□ 0.43
SMIM11A-203ENST00000399299 COL11A1P12107 1806 aaPredicted RBP17.71■□□□□ 0.43
SMIM11A-203ENST00000399299 FLOT1O75955 427 aa17.71■□□□□ 0.43
SMIM11A-203ENST00000399299 CYP2B6P20813 491 aa17.71■□□□□ 0.43
SMIM11A-203ENST00000399299 RGS2P41220 211 aa17.71■□□□□ 0.43
SMIM11A-203ENST00000399299 ALX1Q15699 326 aa17.71■□□□□ 0.43
SMIM11A-203ENST00000399299 ZNF444Q8N0Y2 327 aaPredicted RBP17.71■□□□□ 0.43
SMIM11A-203ENST00000399299 STK11IPQ8N1F8 1099 aa17.71■□□□□ 0.43
SMIM11A-203ENST00000399299 SHCBP1Q8NEM2 672 aa17.71■□□□□ 0.43
SMIM11A-203ENST00000399299 TRIB2Q92519 343 aa17.71■□□□□ 0.43
SMIM11A-203ENST00000399299 APBA2Q99767 749 aa17.71■□□□□ 0.43
SMIM11A-203ENST00000399299 CWC22Q9HCG8 908 aaKnown RBP17.71■□□□□ 0.43
SMIM11A-203ENST00000399299 SYNPO2Q9UMS6 1093 aa17.71■□□□□ 0.43
SMIM11A-203ENST00000399299 A0A0D9SFI3 127 aa17.7■□□□□ 0.42
SMIM11A-203ENST00000399299 SLC15A5A6NIM6 579 aa17.7■□□□□ 0.42
SMIM11A-203ENST00000399299 TRIM6-TRIM34B2RNG4 842 aa17.7■□□□□ 0.42
SMIM11A-203ENST00000399299 PRDM1O75626 825 aa17.7■□□□□ 0.42
SMIM11A-203ENST00000399299 SGPL1O95470 568 aa17.7■□□□□ 0.42
SMIM11A-203ENST00000399299 PTPREP23469 700 aa17.7■□□□□ 0.42
SMIM11A-203ENST00000399299 MAP2K5Q13163 448 aa17.7■□□□□ 0.42
SMIM11A-203ENST00000399299 MCMDC2Q4G0Z9 681 aa17.7■□□□□ 0.42
SMIM11A-203ENST00000399299 UBE2Q1Q7Z7E8 422 aa17.7■□□□□ 0.42
SMIM11A-203ENST00000399299 FAM227BQ96M60 508 aa17.7■□□□□ 0.42
SMIM11A-203ENST00000399299 SPATC1LQ9H0A9 340 aa17.7■□□□□ 0.42
SMIM11A-203ENST00000399299 ANAPC4Q9UJX5 808 aa17.7■□□□□ 0.42
SMIM11A-203ENST00000399299 IVNS1ABPQ9Y6Y0 642 aa17.7■□□□□ 0.42
SMIM11A-203ENST00000399299 ZMYM6O95789 1325 aa17.7■□□□□ 0.42
SMIM11A-203ENST00000399299 RPTORQ8N122 1335 aa17.7■□□□□ 0.42
SMIM11A-203ENST00000399299 HOXC6P09630 235 aa17.69■□□□□ 0.42
SMIM11A-203ENST00000399299 ZKSCAN1P17029 563 aaPredicted RBP17.69■□□□□ 0.42
SMIM11A-203ENST00000399299 GRB14Q14449 540 aa17.69■□□□□ 0.42
SMIM11A-203ENST00000399299 MAP3K21Q5TCX8 1036 aa17.69■□□□□ 0.42
SMIM11A-203ENST00000399299 VPS53Q5VIR6 699 aa17.69■□□□□ 0.42
SMIM11A-203ENST00000399299 NEDD1Q8NHV4 660 aa17.69■□□□□ 0.42
SMIM11A-203ENST00000399299 MKL1Q969V6 931 aa17.69■□□□□ 0.42
SMIM11A-203ENST00000399299 ATG4CQ96DT6 458 aa17.69■□□□□ 0.42
SMIM11A-203ENST00000399299 MOV10L1Q9BXT6 1211 aaKnown RBP17.69■□□□□ 0.42
SMIM11A-203ENST00000399299 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.69■□□□□ 0.42
SMIM11A-203ENST00000399299 HMX1Q9NP08 348 aaPredicted RBP17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms