RNA–Protein interactions for RNA: ENST00000399132.5

COL25A1-203, Transcript of collagen type XXV alpha 1 chain, humanhuman

APPRIS P4 TSL 5 BASIC

Gene COL25A1, Length 2,724 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1-203ENST00000399132 KCNH3Q9ULD8 1083 aa17.25■□□□□ 0.35
COL25A1-203ENST00000399132 DDAH1O94760 285 aa17.24■□□□□ 0.35
COL25A1-203ENST00000399132 EYA3Q99504 573 aa17.24■□□□□ 0.35
COL25A1-203ENST00000399132 MTA3Q9BTC8 594 aa17.24■□□□□ 0.35
COL25A1-203ENST00000399132 RBM28Q9NW13 759 aaKnown RBP17.24■□□□□ 0.35
COL25A1-203ENST00000399132 GPR75-ASB3A0A0A6YYF3 556 aa17.24■□□□□ 0.35
COL25A1-203ENST00000399132 POLR2DO15514 142 aaKnown RBP17.24■□□□□ 0.35
COL25A1-203ENST00000399132 RAD21O60216 631 aa17.24■□□□□ 0.35
COL25A1-203ENST00000399132 EZH2Q15910 746 aaKnown RBP17.24■□□□□ 0.35
COL25A1-203ENST00000399132 HS1BP3Q53T59 392 aa17.24■□□□□ 0.35
COL25A1-203ENST00000399132 KIAA0825Q8IV33 1275 aa17.24■□□□□ 0.35
COL25A1-203ENST00000399132 DHX40Q8IX18 779 aaKnown RBP17.24■□□□□ 0.35
COL25A1-203ENST00000399132 CNNM3Q8NE01 707 aa17.24■□□□□ 0.35
COL25A1-203ENST00000399132 PHF20Q9BVI0 1012 aa17.24■□□□□ 0.35
COL25A1-203ENST00000399132 PPP6R2O75170 966 aa17.23■□□□□ 0.35
COL25A1-203ENST00000399132 CALM1P0DP23 149 aa17.23■□□□□ 0.35
COL25A1-203ENST00000399132 CALM2P0DP24 149 aa17.23■□□□□ 0.35
COL25A1-203ENST00000399132 CALM3P0DP25 149 aa17.23■□□□□ 0.35
COL25A1-203ENST00000399132 PPP4CP60510 307 aa17.23■□□□□ 0.35
COL25A1-203ENST00000399132 RILPL1Q5EBL4 403 aa17.23■□□□□ 0.35
COL25A1-203ENST00000399132 USP17L2Q6R6M4 530 aa17.23■□□□□ 0.35
COL25A1-203ENST00000399132 C2CD5Q86YS7 1000 aa17.23■□□□□ 0.35
COL25A1-203ENST00000399132 TMEM47Q9BQJ4 181 aa17.23■□□□□ 0.35
COL25A1-203ENST00000399132 TMX4Q9H1E5 349 aaPredicted RBP17.23■□□□□ 0.35
COL25A1-203ENST00000399132 NID2Q14112 1375 aa17.23■□□□□ 0.35
COL25A1-203ENST00000399132 FAM196BA6NMK8 535 aa17.23■□□□□ 0.35
COL25A1-203ENST00000399132 PCP11498 1178 aaKnown RBP17.23■□□□□ 0.35
COL25A1-203ENST00000399132 NPR1P16066 1061 aa17.23■□□□□ 0.35
COL25A1-203ENST00000399132 RBM5P52756 815 aaKnown RBP eCLIP17.23■□□□□ 0.35
COL25A1-203ENST00000399132 LRMPQ12912 555 aa17.23■□□□□ 0.35
COL25A1-203ENST00000399132 PTPN21Q16825 1174 aa17.23■□□□□ 0.35
COL25A1-203ENST00000399132 CCDC186Q7Z3E2 898 aa17.23■□□□□ 0.35
COL25A1-203ENST00000399132 CEP57L1Q8IYX8 460 aa17.23■□□□□ 0.35
COL25A1-203ENST00000399132 CSRNP2Q9H175 543 aa17.23■□□□□ 0.35
COL25A1-203ENST00000399132 DDX4Q9NQI0 724 aaKnown RBP17.23■□□□□ 0.35
COL25A1-203ENST00000399132 PLSCR1O15162 318 aa17.22■□□□□ 0.35
COL25A1-203ENST00000399132 SCG2P13521 617 aa17.22■□□□□ 0.35
COL25A1-203ENST00000399132 CASP1P29466 404 aa17.22■□□□□ 0.35
COL25A1-203ENST00000399132 ATP2B2Q01814 1243 aa17.22■□□□□ 0.35
COL25A1-203ENST00000399132 TCP10Q12799 353 aa17.22■□□□□ 0.35
COL25A1-203ENST00000399132 RESP18Q5W5W9 173 aa17.22■□□□□ 0.35
COL25A1-203ENST00000399132 C15orf52Q6ZUT6 534 aaKnown RBP17.22■□□□□ 0.35
COL25A1-203ENST00000399132 HEATR3Q7Z4Q2 680 aa17.22■□□□□ 0.35
COL25A1-203ENST00000399132 EPSTI1Q96J88 318 aa17.22■□□□□ 0.35
COL25A1-203ENST00000399132 KLRG2A4D1S0 409 aaPredicted RBP17.22■□□□□ 0.35
COL25A1-203ENST00000399132 MCM7P33993 719 aa17.22■□□□□ 0.35
COL25A1-203ENST00000399132 ZNF75DP51815 510 aa17.22■□□□□ 0.35
COL25A1-203ENST00000399132 KCNF1Q9H3M0 494 aa17.22■□□□□ 0.35
COL25A1-203ENST00000399132 FBXO2Q9UK22 296 aaPredicted RBP17.22■□□□□ 0.35
COL25A1-203ENST00000399132 MYH6P13533 1939 aa17.22■□□□□ 0.35
COL25A1-203ENST00000399132 ARID5BQ14865 1188 aa17.21■□□□□ 0.35
COL25A1-203ENST00000399132 SLC35G1Q2M3R5 365 aa17.21■□□□□ 0.35
COL25A1-203ENST00000399132 DNTTIP2Q5QJE6 756 aaKnown RBP17.21■□□□□ 0.35
COL25A1-203ENST00000399132 TYW1BQ6NUM6 668 aa17.21■□□□□ 0.35
COL25A1-203ENST00000399132 STAMQ92783 540 aa17.21■□□□□ 0.35
COL25A1-203ENST00000399132 CEP95Q96GE4 821 aa17.21■□□□□ 0.35
COL25A1-203ENST00000399132 TRIM75PA6NK02 468 aa17.21■□□□□ 0.35
COL25A1-203ENST00000399132 CUTAO60888 179 aa17.21■□□□□ 0.35
COL25A1-203ENST00000399132 PDE6BP35913 854 aa17.21■□□□□ 0.35
COL25A1-203ENST00000399132 NPY5RQ15761 445 aa17.21■□□□□ 0.35
COL25A1-203ENST00000399132 METTL16Q86W50 562 aaKnown RBP17.21■□□□□ 0.35
COL25A1-203ENST00000399132 LRRC47Q8N1G4 583 aaKnown RBP17.21■□□□□ 0.35
COL25A1-203ENST00000399132 UBA5Q9GZZ9 404 aa17.21■□□□□ 0.35
COL25A1-203ENST00000399132 USP40Q9NVE5 1235 aa17.21■□□□□ 0.35
COL25A1-203ENST00000399132 CLIP2Q9UDT6 1046 aa17.21■□□□□ 0.35
COL25A1-203ENST00000399132 SERTAD1Q9UHV2 236 aa17.21■□□□□ 0.35
COL25A1-203ENST00000399132 MAD2L2Q9UI95 211 aa17.21■□□□□ 0.35
COL25A1-203ENST00000399132 PYCARDQ9ULZ3 195 aa17.21■□□□□ 0.35
COL25A1-203ENST00000399132 FRMPD2Q68DX3 1309 aaPredicted RBP17.21■□□□□ 0.35
COL25A1-203ENST00000399132 VWA3AA6NCI4 1184 aa17.2■□□□□ 0.34
COL25A1-203ENST00000399132 CYTH3O43739 400 aa17.2■□□□□ 0.34
COL25A1-203ENST00000399132 PRR29P0C7W0 189 aa17.2■□□□□ 0.34
COL25A1-203ENST00000399132 CDC25AP30304 524 aa17.2■□□□□ 0.34
COL25A1-203ENST00000399132 RCAN1P53805 252 aa17.2■□□□□ 0.34
COL25A1-203ENST00000399132 KIAA2012Q0VF49 1180 aa17.2■□□□□ 0.34
COL25A1-203ENST00000399132 FILIP1Q7Z7B0 1213 aa17.2■□□□□ 0.34
COL25A1-203ENST00000399132 FOXP4Q8IVH2 680 aaPredicted RBP17.2■□□□□ 0.34
COL25A1-203ENST00000399132 HPSEQ9Y251 543 aa17.2■□□□□ 0.34
COL25A1-203ENST00000399132 KIAA1551Q9HCM1 1747 aa17.2■□□□□ 0.34
COL25A1-203ENST00000399132 ALDH1B1P30837 517 aa17.2■□□□□ 0.34
COL25A1-203ENST00000399132 KIF5BP33176 963 aa17.2■□□□□ 0.34
COL25A1-203ENST00000399132 CBX1P83916 185 aa17.2■□□□□ 0.34
COL25A1-203ENST00000399132 NFIAQ12857 509 aa17.2■□□□□ 0.34
COL25A1-203ENST00000399132 TBC1D22AQ8WUA7 517 aa17.2■□□□□ 0.34
COL25A1-203ENST00000399132 DHX58Q96C10 678 aa17.2■□□□□ 0.34
COL25A1-203ENST00000399132 MASTLQ96GX5 879 aa17.2■□□□□ 0.34
COL25A1-203ENST00000399132 COA1Q9GZY4 146 aa17.2■□□□□ 0.34
COL25A1-203ENST00000399132 BRMS1Q9HCU9 246 aa17.2■□□□□ 0.34
COL25A1-203ENST00000399132 LMOD1P29536 600 aaPredicted RBP17.2■□□□□ 0.34
COL25A1-203ENST00000399132 AFMP43652 599 aa17.2■□□□□ 0.34
COL25A1-203ENST00000399132 PPP2R5BQ15173 497 aa17.2■□□□□ 0.34
COL25A1-203ENST00000399132 ZFPM1Q8IX07 1006 aa17.2■□□□□ 0.34
COL25A1-203ENST00000399132 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.2■□□□□ 0.34
COL25A1-203ENST00000399132 MPHOSPH10O00566 681 aaKnown RBP17.19■□□□□ 0.34
COL25A1-203ENST00000399132 SHROOM1Q2M3G4 852 aaPredicted RBP17.19■□□□□ 0.34
COL25A1-203ENST00000399132 CCDC144BQ3MJ40 725 aa17.19■□□□□ 0.34
COL25A1-203ENST00000399132 DGKHQ86XP1 1220 aa17.19■□□□□ 0.34
COL25A1-203ENST00000399132 PCDHA5Q9Y5H7 936 aa17.19■□□□□ 0.34
COL25A1-203ENST00000399132 FAM205AQ6ZU69 1335 aa17.19■□□□□ 0.34
COL25A1-203ENST00000399132 PTPREP23469 700 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms