RNA–Protein interactions for RNA: ENST00000398367.1

UBASH3A-203, Transcript of ubiquitin associated and SH3 domain containing A, humanhuman

TSL 1 (best) BASIC

Gene UBASH3A, Length 1,733 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBASH3A-203ENST00000398367 USP28Q96RU2 1077 aa16.9■□□□□ 0.3
UBASH3A-203ENST00000398367 CSRNP1Q96S65 589 aa16.9■□□□□ 0.3
UBASH3A-203ENST00000398367 BRMS1Q9HCU9 246 aa16.9■□□□□ 0.3
UBASH3A-203ENST00000398367 MYOZ2Q9NPC6 264 aa16.9■□□□□ 0.3
UBASH3A-203ENST00000398367 CLRN2A0PK11 232 aa16.9■□□□□ 0.3
UBASH3A-203ENST00000398367 TCP10L2B9ZVM9 353 aa16.9■□□□□ 0.3
UBASH3A-203ENST00000398367 MPHOSPH10O00566 681 aaKnown RBP16.9■□□□□ 0.3
UBASH3A-203ENST00000398367 YEATS4O95619 227 aa16.9■□□□□ 0.3
UBASH3A-203ENST00000398367 SCG2P13521 617 aa16.9■□□□□ 0.3
UBASH3A-203ENST00000398367 ZSCAN23Q3MJ62 389 aa16.9■□□□□ 0.3
UBASH3A-203ENST00000398367 NOSTRINQ8IVI9 506 aa16.9■□□□□ 0.3
UBASH3A-203ENST00000398367 DIS3L2Q8IYB7 885 aaKnown RBP16.9■□□□□ 0.3
UBASH3A-203ENST00000398367 SPZ1Q9BXG8 430 aa16.9■□□□□ 0.3
UBASH3A-203ENST00000398367 ARFGEF1Q9Y6D6 1849 aa16.89■□□□□ 0.29
UBASH3A-203ENST00000398367 NASPP49321 788 aaPredicted RBP16.89■□□□□ 0.29
UBASH3A-203ENST00000398367 ZNF445P59923 1031 aa16.89■□□□□ 0.29
UBASH3A-203ENST00000398367 TMEM179Q6ZVK1 233 aa16.89■□□□□ 0.29
UBASH3A-203ENST00000398367 STAG2Q8N3U4 1231 aa16.89■□□□□ 0.29
UBASH3A-203ENST00000398367 KCNG4Q8TDN1 519 aa16.89■□□□□ 0.29
UBASH3A-203ENST00000398367 PHF20Q9BVI0 1012 aa16.89■□□□□ 0.29
UBASH3A-203ENST00000398367 KANSL2Q9H9L4 492 aa16.89■□□□□ 0.29
UBASH3A-203ENST00000398367 SH3GLB2Q9NR46 395 aa16.89■□□□□ 0.29
UBASH3A-203ENST00000398367 TMEM63CQ9P1W3 806 aa16.89■□□□□ 0.29
UBASH3A-203ENST00000398367 DEKP35659 375 aaKnown RBP16.88■□□□□ 0.29
UBASH3A-203ENST00000398367 ASPRV1Q53RT3 343 aa16.88■□□□□ 0.29
UBASH3A-203ENST00000398367 VEZTQ9HBM0 779 aa16.88■□□□□ 0.29
UBASH3A-203ENST00000398367 VPS54Q9P1Q0 977 aa16.88■□□□□ 0.29
UBASH3A-203ENST00000398367 CLIP2Q9UDT6 1046 aa16.88■□□□□ 0.29
UBASH3A-203ENST00000398367 KCNJ14Q9UNX9 436 aa16.88■□□□□ 0.29
UBASH3A-203ENST00000398367 KLRF2D3W0D1 207 aa16.87■□□□□ 0.29
UBASH3A-203ENST00000398367 WNT10BO00744 389 aa16.87■□□□□ 0.29
UBASH3A-203ENST00000398367 LETM1O95202 739 aaPredicted RBP16.87■□□□□ 0.29
UBASH3A-203ENST00000398367 SNHG28P0DPA3 235 aa16.87■□□□□ 0.29
UBASH3A-203ENST00000398367 KRT2P35908 639 aa16.87■□□□□ 0.29
UBASH3A-203ENST00000398367 TNNI2P48788 182 aa16.87■□□□□ 0.29
UBASH3A-203ENST00000398367 CEBPZQ03701 1054 aaKnown RBP16.87■□□□□ 0.29
UBASH3A-203ENST00000398367 CCDC183Q5T5S1 534 aa16.87■□□□□ 0.29
UBASH3A-203ENST00000398367 NYAP2Q9P242 653 aa16.87■□□□□ 0.29
UBASH3A-203ENST00000398367 CNTNAP1P78357 1384 aa16.87■□□□□ 0.29
UBASH3A-203ENST00000398367 GOLGA6L3A6NEY3 463 aa16.87■□□□□ 0.29
UBASH3A-203ENST00000398367 BTBD18B2RXH4 712 aa16.87■□□□□ 0.29
UBASH3A-203ENST00000398367 PDHBP11177 359 aa16.87■□□□□ 0.29
UBASH3A-203ENST00000398367 TNFAIP1Q13829 316 aa16.87■□□□□ 0.29
UBASH3A-203ENST00000398367 STK38Q15208 465 aa16.87■□□□□ 0.29
UBASH3A-203ENST00000398367 ABCB5Q2M3G0 1257 aa16.87■□□□□ 0.29
UBASH3A-203ENST00000398367 RILPL1Q5EBL4 403 aa16.87■□□□□ 0.29
UBASH3A-203ENST00000398367 ANO1Q5XXA6 986 aa16.87■□□□□ 0.29
UBASH3A-203ENST00000398367 LINC00301Q8NCQ3 95 aa16.87■□□□□ 0.29
UBASH3A-203ENST00000398367 FTOQ9C0B1 505 aaKnown RBP eCLIP16.87■□□□□ 0.29
UBASH3A-203ENST00000398367 FHDC1Q9C0D6 1143 aaPredicted RBP16.87■□□□□ 0.29
UBASH3A-203ENST00000398367 MTMR7Q9Y216 660 aa16.87■□□□□ 0.29
UBASH3A-203ENST00000398367 SIPA1L1O43166 1804 aa16.86■□□□□ 0.29
UBASH3A-203ENST00000398367 hCG_1642624A0A1W2PR95 340 aa16.86■□□□□ 0.29
UBASH3A-203ENST00000398367 TBC1D12O60347 775 aa16.86■□□□□ 0.29
UBASH3A-203ENST00000398367 CALML3P27482 149 aa16.86■□□□□ 0.29
UBASH3A-203ENST00000398367 GMPSP49915 693 aaPredicted RBP16.86■□□□□ 0.29
UBASH3A-203ENST00000398367 PRELPP51888 382 aa16.86■□□□□ 0.29
UBASH3A-203ENST00000398367 LRRC47Q8N1G4 583 aaKnown RBP16.86■□□□□ 0.29
UBASH3A-203ENST00000398367 BICD2Q8TD16 824 aa16.86■□□□□ 0.29
UBASH3A-203ENST00000398367 MKL1Q969V6 931 aa16.86■□□□□ 0.29
UBASH3A-203ENST00000398367 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.86■□□□□ 0.29
UBASH3A-203ENST00000398367 CABP5Q9NP86 173 aa16.86■□□□□ 0.29
UBASH3A-203ENST00000398367 SYNPO2Q9UMS6 1093 aa16.86■□□□□ 0.29
UBASH3A-203ENST00000398367 GREB1LQ9C091 1923 aaPredicted RBP16.86■□□□□ 0.29
UBASH3A-203ENST00000398367 FSD2A1L4K1 749 aa16.85■□□□□ 0.29
UBASH3A-203ENST00000398367 FAM196BA6NMK8 535 aa16.85■□□□□ 0.29
UBASH3A-203ENST00000398367 USP17L5A8MUK1 530 aa16.85■□□□□ 0.29
UBASH3A-203ENST00000398367 LMNB1P20700 586 aa16.85■□□□□ 0.29
UBASH3A-203ENST00000398367 ME1P48163 572 aa16.85■□□□□ 0.29
UBASH3A-203ENST00000398367 SF3A1Q15459 793 aaKnown RBP16.85■□□□□ 0.29
UBASH3A-203ENST00000398367 L1TD1Q5T7N2 865 aaKnown RBP16.85■□□□□ 0.29
UBASH3A-203ENST00000398367 RBM26Q5T8P6 1007 aaKnown RBP16.85■□□□□ 0.29
UBASH3A-203ENST00000398367 USP17L2Q6R6M4 530 aa16.85■□□□□ 0.29
UBASH3A-203ENST00000398367 MICALL2Q8IY33 904 aa16.85■□□□□ 0.29
UBASH3A-203ENST00000398367 JMYQ8N9B5 988 aa16.85■□□□□ 0.29
UBASH3A-203ENST00000398367 CCDC148Q8NFR7 591 aa16.85■□□□□ 0.29
UBASH3A-203ENST00000398367 PGBD1Q96JS3 809 aa16.85■□□□□ 0.29
UBASH3A-203ENST00000398367 CLIC4Q9Y696 253 aa16.85■□□□□ 0.29
UBASH3A-203ENST00000398367 MYH15Q9Y2K3 1946 aa16.85■□□□□ 0.29
UBASH3A-203ENST00000398367 SPTLC2O15270 562 aa16.84■□□□□ 0.29
UBASH3A-203ENST00000398367 CYTH3O43739 400 aa16.84■□□□□ 0.29
UBASH3A-203ENST00000398367 GOLGA8HP0CJ92 632 aa16.84■□□□□ 0.29
UBASH3A-203ENST00000398367 ICA1Q05084 483 aa16.84■□□□□ 0.29
UBASH3A-203ENST00000398367 NBPF9Q3BBW0 867 aa16.84■□□□□ 0.29
UBASH3A-203ENST00000398367 GPATCH4Q5T3I0 446 aaKnown RBP16.84■□□□□ 0.29
UBASH3A-203ENST00000398367 GALNT17Q6IS24 598 aa16.84■□□□□ 0.29
UBASH3A-203ENST00000398367 RRP36Q96EU6 259 aaKnown RBP16.84■□□□□ 0.29
UBASH3A-203ENST00000398367 GJA3Q9Y6H8 435 aa16.84■□□□□ 0.29
UBASH3A-203ENST00000398367 A0A1W2PQ27 194 aa16.84■□□□□ 0.29
UBASH3A-203ENST00000398367 A0A1W2PQ64 194 aa16.84■□□□□ 0.29
UBASH3A-203ENST00000398367 A0A1W2PQD8 194 aa16.84■□□□□ 0.29
UBASH3A-203ENST00000398367 hCG_1984214I3L0E3 225 aa16.84■□□□□ 0.29
UBASH3A-203ENST00000398367 NLRP5P59047 1200 aa16.84■□□□□ 0.29
UBASH3A-203ENST00000398367 SLC39A14Q15043 492 aa16.84■□□□□ 0.29
UBASH3A-203ENST00000398367 ARHGAP27Q6ZUM4 889 aa16.84■□□□□ 0.29
UBASH3A-203ENST00000398367 CLEC10AQ8IUN9 316 aa16.84■□□□□ 0.29
UBASH3A-203ENST00000398367 ZNF713Q8N859 430 aaPredicted RBP16.84■□□□□ 0.29
UBASH3A-203ENST00000398367 CCDC12Q8WUD4 166 aaPredicted RBP16.84■□□□□ 0.29
UBASH3A-203ENST00000398367 SHISA4Q96DD7 197 aa16.84■□□□□ 0.29
UBASH3A-203ENST00000398367 RIOX1Q9H6W3 641 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms