RNA–Protein interactions for RNA: ENST00000397411.6

TSPAN4-207, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSPAN4, Length 1,025 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-207ENST00000397411 U3KPZ7 1027 aaPredicted RBP30.01■■■□□ 2.39
TSPAN4-207ENST00000397411 CDC45O75419 566 aa30■■■□□ 2.39
TSPAN4-207ENST00000397411 TTLL1O95922 423 aa30■■■□□ 2.39
TSPAN4-207ENST00000397411 FGRP09769 529 aa30■■■□□ 2.39
TSPAN4-207ENST00000397411 PTH1RQ03431 593 aa30■■■□□ 2.39
TSPAN4-207ENST00000397411 SPICE1Q8N0Z3 855 aa30■■■□□ 2.39
TSPAN4-207ENST00000397411 STAG1Q8WVM7 1258 aa30■■■□□ 2.39
TSPAN4-207ENST00000397411 ESYT1Q9BSJ8 1104 aa30■■■□□ 2.39
TSPAN4-207ENST00000397411 TANGO6Q9C0B7 1094 aa30■■■□□ 2.39
TSPAN4-207ENST00000397411 MTMR4Q9NYA4 1195 aa30■■■□□ 2.39
TSPAN4-207ENST00000397411 CATSPERGQ6ZRH7 1159 aa29.99■■■□□ 2.39
TSPAN4-207ENST00000397411 ANKRD13CQ8N6S4 541 aa29.99■■■□□ 2.39
TSPAN4-207ENST00000397411 EFCC1Q9HA90 598 aa29.99■■■□□ 2.39
TSPAN4-207ENST00000397411 TRIM17Q9Y577 477 aa29.99■■■□□ 2.39
TSPAN4-207ENST00000397411 TACC3Q9Y6A5 838 aa29.99■■■□□ 2.39
TSPAN4-207ENST00000397411 ADGRA2Q96PE1 1338 aa29.98■■■□□ 2.39
TSPAN4-207ENST00000397411 IGKV6D-41A0A0C4DH26 115 aa29.98■■■□□ 2.39
TSPAN4-207ENST00000397411 TBC1D10CQ8IV04 446 aa29.98■■■□□ 2.39
TSPAN4-207ENST00000397411 BCRP11274 1271 aa29.97■■■□□ 2.39
TSPAN4-207ENST00000397411 HERVK_113P62684 666 aa29.97■■■□□ 2.39
TSPAN4-207ENST00000397411 LACTBP83111 547 aaPredicted RBP29.97■■■□□ 2.39
TSPAN4-207ENST00000397411 GTF3C2Q8WUA4 911 aaPredicted RBP29.97■■■□□ 2.39
TSPAN4-207ENST00000397411 ESR2Q92731 530 aa29.97■■■□□ 2.39
TSPAN4-207ENST00000397411 NBPF3Q9H094 633 aa29.97■■■□□ 2.39
TSPAN4-207ENST00000397411 STX8Q9UNK0 236 aa29.97■■■□□ 2.39
TSPAN4-207ENST00000397411 GREB1LQ9C091 1923 aaPredicted RBP29.96■■■□□ 2.39
TSPAN4-207ENST00000397411 MYH4Q9Y623 1939 aa29.96■■■□□ 2.39
TSPAN4-207ENST00000397411 PLIN4Q96Q06 1357 aa29.96■■■□□ 2.39
TSPAN4-207ENST00000397411 FMNL1O95466 1100 aaPredicted RBP29.96■■■□□ 2.39
TSPAN4-207ENST00000397411 PKN2Q16513 984 aaKnown RBP29.96■■■□□ 2.39
TSPAN4-207ENST00000397411 SAMD1Q6SPF0 538 aaPredicted RBP29.96■■■□□ 2.39
TSPAN4-207ENST00000397411 MCOLN1Q9GZU1 580 aa29.96■■■□□ 2.39
TSPAN4-207ENST00000397411 COG2Q14746 738 aa29.95■■■□□ 2.39
TSPAN4-207ENST00000397411 KIAA1755Q5JYT7 1200 aa29.95■■■□□ 2.39
TSPAN4-207ENST00000397411 MKL1Q969V6 931 aa29.95■■■□□ 2.39
TSPAN4-207ENST00000397411 ANO2Q9NQ90 1003 aa29.95■■■□□ 2.39
TSPAN4-207ENST00000397411 HOXC10Q9NYD6 342 aa29.95■■■□□ 2.39
TSPAN4-207ENST00000397411 F5H6K3 240 aa29.94■■■□□ 2.38
TSPAN4-207ENST00000397411 WDR46O15213 610 aaKnown RBP29.94■■■□□ 2.38
TSPAN4-207ENST00000397411 PSMC4P43686 418 aa29.94■■■□□ 2.38
TSPAN4-207ENST00000397411 KLRC3Q07444 240 aa29.94■■■□□ 2.38
TSPAN4-207ENST00000397411 LRRC47Q8N1G4 583 aaKnown RBP29.94■■■□□ 2.38
TSPAN4-207ENST00000397411 MAP4K1Q92918 833 aa29.94■■■□□ 2.38
TSPAN4-207ENST00000397411 PAGR1Q9BTK6 254 aa29.94■■■□□ 2.38
TSPAN4-207ENST00000397411 KRT23Q9C075 422 aa29.94■■■□□ 2.38
TSPAN4-207ENST00000397411 CNNM2Q9H8M5 875 aa29.94■■■□□ 2.38
TSPAN4-207ENST00000397411 NMT2O60551 498 aa29.93■■■□□ 2.38
TSPAN4-207ENST00000397411 TRDNQ13061 729 aa29.93■■■□□ 2.38
TSPAN4-207ENST00000397411 FAM110CQ1W6H9 321 aa29.93■■■□□ 2.38
TSPAN4-207ENST00000397411 OTOP1Q7RTM1 612 aa29.93■■■□□ 2.38
TSPAN4-207ENST00000397411 CCAR1Q8IX12 1150 aaKnown RBP29.93■■■□□ 2.38
TSPAN4-207ENST00000397411 IL17RBQ9NRM6 502 aa29.93■■■□□ 2.38
TSPAN4-207ENST00000397411 ISY1Q9ULR0 285 aaKnown RBP29.93■■■□□ 2.38
TSPAN4-207ENST00000397411 LAMA4Q16363 1823 aa29.93■■■□□ 2.38
TSPAN4-207ENST00000397411 FLOT1O75955 427 aa29.92■■■□□ 2.38
TSPAN4-207ENST00000397411 HOXD10P28358 340 aa29.92■■■□□ 2.38
TSPAN4-207ENST00000397411 NT5C2P49902 561 aa29.92■■■□□ 2.38
TSPAN4-207ENST00000397411 FCGRTP55899 365 aa29.92■■■□□ 2.38
TSPAN4-207ENST00000397411 GPRC5AQ8NFJ5 357 aa29.92■■■□□ 2.38
TSPAN4-207ENST00000397411 ARHGAP39Q9C0H5 1083 aa29.92■■■□□ 2.38
TSPAN4-207ENST00000397411 RBM8AQ9Y5S9 174 aaKnown RBP29.92■■■□□ 2.38
TSPAN4-207ENST00000397411 NEDD4P46934 1319 aa29.92■■■□□ 2.38
TSPAN4-207ENST00000397411 B4E1Z4 1266 aa29.91■■■□□ 2.38
TSPAN4-207ENST00000397411 KDM4AO75164 1064 aa29.91■■■□□ 2.38
TSPAN4-207ENST00000397411 FAM83BQ5T0W9 1011 aa29.91■■■□□ 2.38
TSPAN4-207ENST00000397411 SLFN13Q68D06 897 aa29.91■■■□□ 2.38
TSPAN4-207ENST00000397411 TCP11L1Q9NUJ3 509 aa29.91■■■□□ 2.38
TSPAN4-207ENST00000397411 SYNPO2Q9UMS6 1093 aa29.91■■■□□ 2.38
TSPAN4-207ENST00000397411 NDUFB10O96000 172 aa29.9■■■□□ 2.38
TSPAN4-207ENST00000397411 GNRH1P01148 92 aa29.9■■■□□ 2.38
TSPAN4-207ENST00000397411 IQCA1Q86XH1 822 aa29.9■■■□□ 2.38
TSPAN4-207ENST00000397411 LSG1Q9H089 658 aaKnown RBP29.9■■■□□ 2.38
TSPAN4-207ENST00000397411 RBPJLQ9UBG7 517 aa29.9■■■□□ 2.38
TSPAN4-207ENST00000397411 CYP21A2P08686 494 aa29.89■■■□□ 2.38
TSPAN4-207ENST00000397411 CCDC178Q5BJE1 867 aa29.89■■■□□ 2.38
TSPAN4-207ENST00000397411 GMCL1P1Q8NEA9 526 aa29.89■■■□□ 2.38
TSPAN4-207ENST00000397411 MORF4L1Q9UBU8 362 aa29.89■■■□□ 2.38
TSPAN4-207ENST00000397411 MTMR7Q9Y216 660 aa29.89■■■□□ 2.38
TSPAN4-207ENST00000397411 RABGAP1Q9Y3P9 1069 aa29.89■■■□□ 2.38
TSPAN4-207ENST00000397411 FBXO46Q6PJ61 603 aaPredicted RBP29.88■■■□□ 2.37
TSPAN4-207ENST00000397411 CHMP4CQ96CF2 233 aa29.88■■■□□ 2.37
TSPAN4-207ENST00000397411 TRIM47Q96LD4 638 aa29.88■■■□□ 2.37
TSPAN4-207ENST00000397411 NUP88Q99567 741 aaPredicted RBP29.88■■■□□ 2.37
TSPAN4-207ENST00000397411 ZKSCAN3Q9BRR0 538 aa29.88■■■□□ 2.37
TSPAN4-207ENST00000397411 CWC22Q9HCG8 908 aaKnown RBP29.88■■■□□ 2.37
TSPAN4-207ENST00000397411 SPDYE16A6NNV3 312 aaPredicted RBP29.87■■■□□ 2.37
TSPAN4-207ENST00000397411 TNPO2O14787 897 aaKnown RBP29.87■■■□□ 2.37
TSPAN4-207ENST00000397411 TOP1P11387 765 aaKnown RBP29.87■■■□□ 2.37
TSPAN4-207ENST00000397411 DSG3P32926 999 aa29.87■■■□□ 2.37
TSPAN4-207ENST00000397411 TTC14Q96N46 770 aa29.87■■■□□ 2.37
TSPAN4-207ENST00000397411 ZSWIM5Q9P217 1185 aa29.87■■■□□ 2.37
TSPAN4-207ENST00000397411 PEX10O60683 326 aa29.86■■■□□ 2.37
TSPAN4-207ENST00000397411 ERVK-9P63128 1117 aa29.86■■■□□ 2.37
TSPAN4-207ENST00000397411 ERVK-24P63145 666 aa29.86■■■□□ 2.37
TSPAN4-207ENST00000397411 CCNA1P78396 465 aa29.86■■■□□ 2.37
TSPAN4-207ENST00000397411 RALYLQ86SE5 291 aaKnown RBP29.86■■■□□ 2.37
TSPAN4-207ENST00000397411 COA7Q96BR5 231 aa29.86■■■□□ 2.37
TSPAN4-207ENST00000397411 TXNRD2Q9NNW7 524 aa29.86■■■□□ 2.37
TSPAN4-207ENST00000397411 PTPN22Q9Y2R2 807 aa29.86■■■□□ 2.37
TSPAN4-207ENST00000397411 MGAMO43451 1857 aa29.85■■■□□ 2.37
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms