RNA–Protein interactions for RNA: ENST00000397117.5

SEC13-209, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 5 BASIC

Gene SEC13, Length 1,603 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-209ENST00000397117 AGTPBP1Q9UPW5 1226 aa15.61■□□□□ 0.09
SEC13-209ENST00000397117 TRIM75PA6NK02 468 aa15.61■□□□□ 0.09
SEC13-209ENST00000397117 TBC1D12O60347 775 aa15.61■□□□□ 0.09
SEC13-209ENST00000397117 PPARAQ07869 468 aa15.61■□□□□ 0.09
SEC13-209ENST00000397117 STOX1Q6ZVD7 989 aa15.61■□□□□ 0.09
SEC13-209ENST00000397117 RALYLQ86SE5 291 aaKnown RBP15.61■□□□□ 0.09
SEC13-209ENST00000397117 MAPKAPK5Q8IW41 473 aa15.61■□□□□ 0.09
SEC13-209ENST00000397117 PDRG1Q9NUG6 133 aa15.61■□□□□ 0.09
SEC13-209ENST00000397117 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.61■□□□□ 0.09
SEC13-209ENST00000397117 USP17L12C9JPN9 530 aa15.6■□□□□ 0.09
SEC13-209ENST00000397117 USP17L21D6R901 530 aa15.6■□□□□ 0.09
SEC13-209ENST00000397117 EVI5O60447 810 aa15.6■□□□□ 0.09
SEC13-209ENST00000397117 NPM3O75607 178 aaKnown RBP15.6■□□□□ 0.09
SEC13-209ENST00000397117 SLC3A2P08195 630 aaKnown RBP15.6■□□□□ 0.09
SEC13-209ENST00000397117 CPA1P15085 419 aa15.6■□□□□ 0.09
SEC13-209ENST00000397117 MCM2P49736 904 aa15.6■□□□□ 0.09
SEC13-209ENST00000397117 CTR9Q6PD62 1173 aa15.6■□□□□ 0.09
SEC13-209ENST00000397117 CCDC84Q86UT8 332 aaPredicted RBP15.6■□□□□ 0.09
SEC13-209ENST00000397117 ANKRD13CQ8N6S4 541 aa15.6■□□□□ 0.09
SEC13-209ENST00000397117 NCOA7Q8NI08 942 aa15.6■□□□□ 0.09
SEC13-209ENST00000397117 SMCR8Q8TEV9 937 aaPredicted RBP15.6■□□□□ 0.09
SEC13-209ENST00000397117 TBC1D2Q9BYX2 928 aa15.6■□□□□ 0.09
SEC13-209ENST00000397117 RNF41Q9H4P4 317 aaPredicted RBP15.6■□□□□ 0.09
SEC13-209ENST00000397117 FLT1P17948 1338 aa15.59■□□□□ 0.09
SEC13-209ENST00000397117 POLR3DP05423 398 aaPredicted RBP15.59■□□□□ 0.09
SEC13-209ENST00000397117 RPS6KB1P23443 525 aa15.59■□□□□ 0.09
SEC13-209ENST00000397117 CTDSPL2Q05D32 466 aa15.59■□□□□ 0.09
SEC13-209ENST00000397117 PICALMQ13492 652 aa15.59■□□□□ 0.09
SEC13-209ENST00000397117 SBK1Q52WX2 424 aa15.59■□□□□ 0.09
SEC13-209ENST00000397117 TREML2Q5T2D2 321 aa15.59■□□□□ 0.09
SEC13-209ENST00000397117 MFSD6Q6ZSS7 791 aa15.59■□□□□ 0.09
SEC13-209ENST00000397117 TBC1D10CQ8IV04 446 aa15.59■□□□□ 0.09
SEC13-209ENST00000397117 COA7Q96BR5 231 aa15.59■□□□□ 0.09
SEC13-209ENST00000397117 CNNM2Q9H8M5 875 aa15.59■□□□□ 0.09
SEC13-209ENST00000397117 ANAPC4Q9UJX5 808 aa15.59■□□□□ 0.09
SEC13-209ENST00000397117 LOC285556D6RIA3 1793 aa15.59■□□□□ 0.09
SEC13-209ENST00000397117 ATAD5Q96QE3 1844 aa15.58■□□□□ 0.09
SEC13-209ENST00000397117 SOX1O00570 391 aaPredicted RBP15.58■□□□□ 0.09
SEC13-209ENST00000397117 FAM110CQ1W6H9 321 aa15.58■□□□□ 0.09
SEC13-209ENST00000397117 AKNAD1Q5T1N1 836 aa15.58■□□□□ 0.09
SEC13-209ENST00000397117 DHX32Q7L7V1 743 aaKnown RBP15.58■□□□□ 0.09
SEC13-209ENST00000397117 PROCA1Q8NCQ7 364 aaPredicted RBP15.58■□□□□ 0.09
SEC13-209ENST00000397117 PAWRQ96IZ0 340 aaKnown RBP15.58■□□□□ 0.09
SEC13-209ENST00000397117 NBPF3Q9H094 633 aa15.58■□□□□ 0.09
SEC13-209ENST00000397117 CYP2D7A0A087X1C5 515 aa15.57■□□□□ 0.08
SEC13-209ENST00000397117 K7ELQ4 463 aaPredicted RBP15.57■□□□□ 0.08
SEC13-209ENST00000397117 CD2BP2O95400 341 aaKnown RBP15.57■□□□□ 0.08
SEC13-209ENST00000397117 FGD1P98174 961 aa15.57■□□□□ 0.08
SEC13-209ENST00000397117 STK11IPQ8N1F8 1099 aa15.57■□□□□ 0.08
SEC13-209ENST00000397117 STAG1Q8WVM7 1258 aa15.57■□□□□ 0.08
SEC13-209ENST00000397117 KRT23Q9C075 422 aa15.57■□□□□ 0.08
SEC13-209ENST00000397117 TOMM22Q9NS69 142 aa15.57■□□□□ 0.08
SEC13-209ENST00000397117 SAP30BPQ9UHR5 308 aaKnown RBP15.57■□□□□ 0.08
SEC13-209ENST00000397117 GJD2Q9UKL4 321 aa15.57■□□□□ 0.08
SEC13-209ENST00000397117 PNMA3Q9UL41 463 aa15.57■□□□□ 0.08
SEC13-209ENST00000397117 PLXNB2O15031 1838 aa15.57■□□□□ 0.08
SEC13-209ENST00000397117 PCP11498 1178 aaKnown RBP15.57■□□□□ 0.08
SEC13-209ENST00000397117 MCM5P33992 734 aa15.57■□□□□ 0.08
SEC13-209ENST00000397117 SPP2Q13103 211 aa15.57■□□□□ 0.08
SEC13-209ENST00000397117 ANKRD1Q15327 319 aa15.57■□□□□ 0.08
SEC13-209ENST00000397117 TTC14Q96N46 770 aa15.57■□□□□ 0.08
SEC13-209ENST00000397117 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.57■□□□□ 0.081e-7■■□□□ 12.5
SEC13-209ENST00000397117 OSBPL5Q9H0X9 879 aaPredicted RBP15.57■□□□□ 0.08
SEC13-209ENST00000397117 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.57■□□□□ 0.08
SEC13-209ENST00000397117 LAMA4Q16363 1823 aa15.56■□□□□ 0.08
SEC13-209ENST00000397117 FAM196BA6NMK8 535 aa15.56■□□□□ 0.08
SEC13-209ENST00000397117 CYP2D6P10635 497 aa15.56■□□□□ 0.08
SEC13-209ENST00000397117 GCLCP48506 637 aaPredicted RBP15.56■□□□□ 0.08
SEC13-209ENST00000397117 SLC4A3P48751 1232 aa15.56■□□□□ 0.08
SEC13-209ENST00000397117 AK2P54819 239 aa15.56■□□□□ 0.08
SEC13-209ENST00000397117 PDE4BQ07343 736 aa15.56■□□□□ 0.08
SEC13-209ENST00000397117 RRP1BQ14684 758 aaKnown RBP15.56■□□□□ 0.08
SEC13-209ENST00000397117 RRP12Q5JTH9 1297 aaKnown RBP15.56■□□□□ 0.08
SEC13-209ENST00000397117 C12orf60Q5U649 245 aa15.56■□□□□ 0.08
SEC13-209ENST00000397117 NOL8Q76FK4 1167 aaKnown RBP15.56■□□□□ 0.08
SEC13-209ENST00000397117 NECAB2Q7Z6G3 386 aa15.56■□□□□ 0.08
SEC13-209ENST00000397117 ZNF280CQ8ND82 737 aa15.56■□□□□ 0.08
SEC13-209ENST00000397117 DIS3LQ8TF46 1054 aaKnown RBP15.56■□□□□ 0.08
SEC13-209ENST00000397117 TAOK2Q9UL54 1235 aa15.56■□□□□ 0.08
SEC13-209ENST00000397117 NEDD4P46934 1319 aa15.55■□□□□ 0.08
SEC13-209ENST00000397117 COL2A1P02458 1487 aaPredicted RBP15.55■□□□□ 0.08
SEC13-209ENST00000397117 BMP8BP34820 402 aa15.55■□□□□ 0.08
SEC13-209ENST00000397117 MB21D2Q8IYB1 491 aaPredicted RBP15.55■□□□□ 0.08
SEC13-209ENST00000397117 ANKLE1Q8NAG6 615 aa15.55■□□□□ 0.08
SEC13-209ENST00000397117 SLC17A8Q8NDX2 589 aa15.55■□□□□ 0.08
SEC13-209ENST00000397117 LRCH3Q96II8 777 aa15.55■□□□□ 0.08
SEC13-209ENST00000397117 TCEANC2Q96MN5 208 aa15.55■□□□□ 0.08
SEC13-209ENST00000397117 GDF15Q99988 308 aa15.55■□□□□ 0.08
SEC13-209ENST00000397117 ALDH8A1Q9H2A2 487 aaPredicted RBP15.55■□□□□ 0.08
SEC13-209ENST00000397117 BAZ2AQ9UIF9 1905 aaKnown RBP15.55■□□□□ 0.08
SEC13-209ENST00000397117 B4E1Z4 1266 aa15.54■□□□□ 0.08
SEC13-209ENST00000397117 PRC1O43663 620 aa15.54■□□□□ 0.08
SEC13-209ENST00000397117 HSP90AA1P07900 732 aaKnown RBP15.54■□□□□ 0.08
SEC13-209ENST00000397117 CAP2P40123 477 aa15.54■□□□□ 0.08
SEC13-209ENST00000397117 MNX1P50219 401 aaPredicted RBP15.54■□□□□ 0.08
SEC13-209ENST00000397117 SH3D19Q5HYK7 790 aa15.54■□□□□ 0.08
SEC13-209ENST00000397117 TTC6Q86TZ1 520 aa15.54■□□□□ 0.08
SEC13-209ENST00000397117 ASCC2Q9H1I8 757 aaPredicted RBP15.54■□□□□ 0.08
SEC13-209ENST00000397117 ZNF287Q9HBT7 754 aa15.54■□□□□ 0.08
SEC13-209ENST00000397117 INCENPQ9NQS7 918 aa15.54■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms