RNA–Protein interactions for RNA: ENST00000393546.8

PDLIM7-204, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-204ENST00000393546 GOPCQ9HD26 462 aa22.48■■□□□ 1.19
PDLIM7-204ENST00000393546 ADGRA2Q96PE1 1338 aa22.48■■□□□ 1.19
PDLIM7-204ENST00000393546 TTLL1O95922 423 aa22.47■■□□□ 1.19
PDLIM7-204ENST00000393546 GCLCP48506 637 aaPredicted RBP22.47■■□□□ 1.19
PDLIM7-204ENST00000393546 ARHGEF6Q15052 776 aa22.47■■□□□ 1.19
PDLIM7-204ENST00000393546 CATSPERGQ6ZRH7 1159 aa22.47■■□□□ 1.19
PDLIM7-204ENST00000393546 TBC1D10CQ8IV04 446 aa22.47■■□□□ 1.19
PDLIM7-204ENST00000393546 MAP4K1Q92918 833 aa22.47■■□□□ 1.19
PDLIM7-204ENST00000393546 MKL1Q969V6 931 aa22.47■■□□□ 1.19
PDLIM7-204ENST00000393546 P2RX7Q99572 595 aaKnown RBP22.47■■□□□ 1.19
PDLIM7-204ENST00000393546 PLIN4Q96Q06 1357 aa22.47■■□□□ 1.19
PDLIM7-204ENST00000393546 GREB1LQ9C091 1923 aaPredicted RBP22.47■■□□□ 1.19
PDLIM7-204ENST00000393546 NT5C2P49902 561 aa22.46■■□□□ 1.19
PDLIM7-204ENST00000393546 KIF22Q14807 665 aa22.46■■□□□ 1.19
PDLIM7-204ENST00000393546 CD99L2Q8TCZ2 262 aa22.46■■□□□ 1.19
PDLIM7-204ENST00000393546 RPAP3Q9H6T3 665 aaPredicted RBP22.46■■□□□ 1.19
PDLIM7-204ENST00000393546 RAD21O60216 631 aa22.45■■□□□ 1.18
PDLIM7-204ENST00000393546 BCRP11274 1271 aa22.45■■□□□ 1.18
PDLIM7-204ENST00000393546 CTU1Q7Z7A3 348 aaKnown RBP22.45■■□□□ 1.18
PDLIM7-204ENST00000393546 ESR2Q92731 530 aa22.45■■□□□ 1.18
PDLIM7-204ENST00000393546 HERVK_113P62684 666 aa22.44■■□□□ 1.18
PDLIM7-204ENST00000393546 KIAA1755Q5JYT7 1200 aa22.44■■□□□ 1.18
PDLIM7-204ENST00000393546 SPICE1Q8N0Z3 855 aa22.44■■□□□ 1.18
PDLIM7-204ENST00000393546 GTF3C2Q8WUA4 911 aaPredicted RBP22.44■■□□□ 1.18
PDLIM7-204ENST00000393546 IL17RBQ9NRM6 502 aa22.44■■□□□ 1.18
PDLIM7-204ENST00000393546 TCP11L1Q9NUJ3 509 aa22.44■■□□□ 1.18
PDLIM7-204ENST00000393546 SYNPO2Q9UMS6 1093 aa22.44■■□□□ 1.18
PDLIM7-204ENST00000393546 F5H6K3 240 aa22.43■■□□□ 1.18
PDLIM7-204ENST00000393546 WDR46O15213 610 aaKnown RBP22.43■■□□□ 1.18
PDLIM7-204ENST00000393546 LACTBP83111 547 aaPredicted RBP22.43■■□□□ 1.18
PDLIM7-204ENST00000393546 KLRC3Q07444 240 aa22.43■■□□□ 1.18
PDLIM7-204ENST00000393546 ANKRD13CQ8N6S4 541 aa22.43■■□□□ 1.18
PDLIM7-204ENST00000393546 KRT23Q9C075 422 aa22.43■■□□□ 1.18
PDLIM7-204ENST00000393546 TANGO6Q9C0B7 1094 aa22.43■■□□□ 1.18
PDLIM7-204ENST00000393546 LSG1Q9H089 658 aaKnown RBP22.43■■□□□ 1.18
PDLIM7-204ENST00000393546 CNNM2Q9H8M5 875 aa22.43■■□□□ 1.18
PDLIM7-204ENST00000393546 ANO2Q9NQ90 1003 aa22.43■■□□□ 1.18
PDLIM7-204ENST00000393546 STX8Q9UNK0 236 aa22.43■■□□□ 1.18
PDLIM7-204ENST00000393546 RBM8AQ9Y5S9 174 aaKnown RBP22.43■■□□□ 1.18
PDLIM7-204ENST00000393546 LAMA4Q16363 1823 aa22.43■■□□□ 1.18
PDLIM7-204ENST00000393546 NEDD4P46934 1319 aa22.42■■□□□ 1.18
PDLIM7-204ENST00000393546 COG2Q14746 738 aa22.42■■□□□ 1.18
PDLIM7-204ENST00000393546 TNS4Q8IZW8 715 aa22.42■■□□□ 1.18
PDLIM7-204ENST00000393546 EFCC1Q9HA90 598 aa22.42■■□□□ 1.18
PDLIM7-204ENST00000393546 HOXC10Q9NYD6 342 aa22.42■■□□□ 1.18
PDLIM7-204ENST00000393546 MYH4Q9Y623 1939 aa22.41■■□□□ 1.18
PDLIM7-204ENST00000393546 NMT2O60551 498 aa22.41■■□□□ 1.18
PDLIM7-204ENST00000393546 CYP21A2P08686 494 aa22.41■■□□□ 1.18
PDLIM7-204ENST00000393546 TRDNQ13061 729 aa22.41■■□□□ 1.18
PDLIM7-204ENST00000393546 PKN2Q16513 984 aaKnown RBP22.41■■□□□ 1.18
PDLIM7-204ENST00000393546 FAM110CQ1W6H9 321 aa22.41■■□□□ 1.18
PDLIM7-204ENST00000393546 TRIM17Q9Y577 477 aa22.41■■□□□ 1.18
PDLIM7-204ENST00000393546 B4E1Z4 1266 aa22.4■■□□□ 1.18
PDLIM7-204ENST00000393546 KDM4AO75164 1064 aa22.4■■□□□ 1.18
PDLIM7-204ENST00000393546 NDUFB10O96000 172 aa22.4■■□□□ 1.18
PDLIM7-204ENST00000393546 CCDC178Q5BJE1 867 aa22.4■■□□□ 1.18
PDLIM7-204ENST00000393546 OTOP1Q7RTM1 612 aa22.4■■□□□ 1.18
PDLIM7-204ENST00000393546 LRRC47Q8N1G4 583 aaKnown RBP22.4■■□□□ 1.18
PDLIM7-204ENST00000393546 GMCL1P1Q8NEA9 526 aa22.4■■□□□ 1.18
PDLIM7-204ENST00000393546 MORF4L1Q9UBU8 362 aa22.4■■□□□ 1.18
PDLIM7-204ENST00000393546 FLOT1O75955 427 aa22.39■■□□□ 1.17
PDLIM7-204ENST00000393546 FMNL1O95466 1100 aaPredicted RBP22.39■■□□□ 1.17
PDLIM7-204ENST00000393546 PSMC4P43686 418 aa22.39■■□□□ 1.17
PDLIM7-204ENST00000393546 NOVP48745 357 aa22.39■■□□□ 1.17
PDLIM7-204ENST00000393546 FAM83BQ5T0W9 1011 aa22.39■■□□□ 1.17
PDLIM7-204ENST00000393546 SLFN13Q68D06 897 aa22.39■■□□□ 1.17
PDLIM7-204ENST00000393546 IQCA1Q86XH1 822 aa22.39■■□□□ 1.17
PDLIM7-204ENST00000393546 GPRC5AQ8NFJ5 357 aa22.39■■□□□ 1.17
PDLIM7-204ENST00000393546 TTC14Q96N46 770 aa22.39■■□□□ 1.17
PDLIM7-204ENST00000393546 MCOLN1Q9GZU1 580 aa22.39■■□□□ 1.17
PDLIM7-204ENST00000393546 ZSWIM5Q9P217 1185 aa22.39■■□□□ 1.17
PDLIM7-204ENST00000393546 RBPJLQ9UBG7 517 aa22.39■■□□□ 1.17
PDLIM7-204ENST00000393546 ECM2O94769 699 aaPredicted RBP22.38■■□□□ 1.17
PDLIM7-204ENST00000393546 GNRH1P01148 92 aa22.38■■□□□ 1.17
PDLIM7-204ENST00000393546 TOP1P11387 765 aaKnown RBP22.38■■□□□ 1.17
PDLIM7-204ENST00000393546 DSG3P32926 999 aa22.38■■□□□ 1.17
PDLIM7-204ENST00000393546 LBX2Q6XYB7 198 aa22.38■■□□□ 1.17
PDLIM7-204ENST00000393546 NKX2-3Q8TAU0 364 aa22.38■■□□□ 1.17
PDLIM7-204ENST00000393546 PAGR1Q9BTK6 254 aa22.38■■□□□ 1.17
PDLIM7-204ENST00000393546 ARHGAP39Q9C0H5 1083 aa22.38■■□□□ 1.17
PDLIM7-204ENST00000393546 RABGAP1Q9Y3P9 1069 aa22.38■■□□□ 1.17
PDLIM7-204ENST00000393546 SPDYE16A6NNV3 312 aaPredicted RBP22.37■■□□□ 1.17
PDLIM7-204ENST00000393546 E7EWF7 191 aa22.37■■□□□ 1.17
PDLIM7-204ENST00000393546 HOXD10P28358 340 aa22.37■■□□□ 1.17
PDLIM7-204ENST00000393546 FCGRTP55899 365 aa22.37■■□□□ 1.17
PDLIM7-204ENST00000393546 ZKSCAN3Q9BRR0 538 aa22.37■■□□□ 1.17
PDLIM7-204ENST00000393546 MYPNQ86TC9 1320 aa22.36■■□□□ 1.17
PDLIM7-204ENST00000393546 CAP1Q01518 475 aa22.36■■□□□ 1.17
PDLIM7-204ENST00000393546 NECTIN1Q15223 517 aa22.36■■□□□ 1.17
PDLIM7-204ENST00000393546 SAMD1Q6SPF0 538 aaPredicted RBP22.36■■□□□ 1.17
PDLIM7-204ENST00000393546 RALYLQ86SE5 291 aaKnown RBP22.36■■□□□ 1.17
PDLIM7-204ENST00000393546 DGKHQ86XP1 1220 aa22.36■■□□□ 1.17
PDLIM7-204ENST00000393546 NCOA7Q8NI08 942 aa22.36■■□□□ 1.17
PDLIM7-204ENST00000393546 TRIM47Q96LD4 638 aa22.36■■□□□ 1.17
PDLIM7-204ENST00000393546 NUP88Q99567 741 aaPredicted RBP22.36■■□□□ 1.17
PDLIM7-204ENST00000393546 TMEM47Q9BQJ4 181 aa22.36■■□□□ 1.17
PDLIM7-204ENST00000393546 TXNRD2Q9NNW7 524 aa22.36■■□□□ 1.17
PDLIM7-204ENST00000393546 SLC27A2O14975 620 aa22.35■■□□□ 1.17
PDLIM7-204ENST00000393546 BMP3P12645 472 aa22.35■■□□□ 1.17
PDLIM7-204ENST00000393546 CTGFP29279 349 aa22.35■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms